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UBERON:0001485: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=knee joint
|name=knee joint
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001465
|part_of=UBERON:0001465

Latest revision as of 17:18, 12 September 2014

Name:knee joint
Namespace:FANTOM
Definition:"The knee joint joins the thigh with the leg and consists of two articulations: one between the femur and tibia, and one between the femur and patella. It is the largest and most complicated joint in the human body. The knee is a mobile trocho-ginglymus (i.e. a pivotal hinge joint), which permits flexion and extension as well as a slight medial and lateral rotation. Since in humans the knee supports nearly the whole weight of the body, it is the joint most vulnerable both to acute injury and the development of osteoarthritis. [WP,unvetted]." [Wikipedia:Knee]
Xrefs:
links:

EFO:0001957
EMAPA:19137
FMA:35175
GAID:114
galen:KneeJoint
[1]
MA:0000471
MESH:A.02.835.583.475
ncithesaurus:Knee_Joint
OpenCyc:Mx4rwCuaYZwpEbGdrcN5Y29ycA
SCTID:182204005

VHOG:0001003
Synonyms: "articulatio genus" RELATED LATIN [Wikipedia:Knee]
"joint of knee" EXACT [OBOL:automatic]
Alt_id: UBERON:FMA_35175-MA_0000471
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003840(hindlimb joint),UBERON:0011139(synovial limb joint)
develops_from:UBERON:0006256(knee joint primordium)
part_of:UBERON:0001465(knee)



Children

part of:UBERON:0006659 (cruciate ligament of knee),UBERON:0011088 (ligament of knee joint)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001485 (knee joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results