UBERON:0000101: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=lobe of lung | |name=lobe of lung | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002048 | |part_of=UBERON:0002048 | ||
Latest revision as of 17:06, 12 September 2014
| Name: | lobe of lung | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A lung lobe is one of the rounded projections that compose the lung[GO]." [GOC:GO] | ||
| Xrefs: |
| ||
| Synonyms: |
"lung lobe" EXACT [] "pulminory lobe" EXACT [] "pulmonary lobe" EXACT [FMA:7311] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure) |
|---|---|
| part_of: | UBERON:0002048(lung) |
Children
| is a: | UBERON:0006518 (right lung lobe),UBERON:0008949 (lower lobe of lung) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000101 (lobe of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_bb9436d85e355b87202ac7aaf421e4c0 | p1@ENST00000425887, p1@uc002suw.1 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_bb9436d85e355b87202ac7aaf421e4c0 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chrX:93772866..93772868, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr8:22021803..22021813, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_bb9436d85e355b87202ac7aaf421e4c0 | p1@ENST00000425887, p1@uc002suw.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chrX:93772866..93772868, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_bb9436d85e355b87202ac7aaf421e4c0 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_bb9436d85e355b87202ac7aaf421e4c0 | p@chr8:22021803..22021813, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_239a73af825730138dffc117c934ceb5 | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_239a73af825730138dffc117c934ceb5 | p40@SFTPB |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_239a73af825730138dffc117c934ceb5 | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_239a73af825730138dffc117c934ceb5 | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_239a73af825730138dffc117c934ceb5 | p10@ROS1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_239a73af825730138dffc117c934ceb5 | p23@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_239a73af825730138dffc117c934ceb5 | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_239a73af825730138dffc117c934ceb5 | p13@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_239a73af825730138dffc117c934ceb5 | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_239a73af825730138dffc117c934ceb5 | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_239a73af825730138dffc117c934ceb5 | p7@AGER |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021526..22021532, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_239a73af825730138dffc117c934ceb5 | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_239a73af825730138dffc117c934ceb5 | p12@SFTPC |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_239a73af825730138dffc117c934ceb5 | p23@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_239a73af825730138dffc117c934ceb5 | p40@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_239a73af825730138dffc117c934ceb5 | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_239a73af825730138dffc117c934ceb5 | p13@SFTPC |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_239a73af825730138dffc117c934ceb5 | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_239a73af825730138dffc117c934ceb5 | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_239a73af825730138dffc117c934ceb5 | p10@ROS1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_239a73af825730138dffc117c934ceb5 | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374752..81374761, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_239a73af825730138dffc117c934ceb5 | p@chr10:23631651..23631656, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_239a73af825730138dffc117c934ceb5 | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_239a73af825730138dffc117c934ceb5 | p12@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_239a73af825730138dffc117c934ceb5 | p7@AGER |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374752..81374761, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_239a73af825730138dffc117c934ceb5 | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_239a73af825730138dffc117c934ceb5 | p@chr10:23631651..23631656, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_239a73af825730138dffc117c934ceb5 | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_239a73af825730138dffc117c934ceb5 | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_239a73af825730138dffc117c934ceb5 | p@chr8:22021526..22021532, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:85893526..85893535,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p@chr2:85893526..85893535, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:96223975..96224010,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p@chr12:96223975..96224010, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:30905155..30905161,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p@chr6:30905155..30905161, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr16:23489788..23489792,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p@chr16:23489788..23489792, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:85893752..85893757,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p22@SFTPB |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:85893708..85893714,-#_28ebc3a7e43297c6bc11a75c4b026da1 | p@chr2:85893708..85893714, - |
