CL:0000836: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=promyelocyte | |name=promyelocyte | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:38, 12 September 2014
| Name: | promyelocyte | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A precursor in the granulocytic series, being a cell intermediate in development between a myeloblast and myelocyte, that has distinct nucleoli, a nuclear-to-cytoplasmic ratio of 5:1 to 3:1, and containing a few primary cytoplasmic granules. Markers for this cell are fucosyltransferase FUT4-positive, CD33-positive, integrin alpha-M-negative, low affinity immunoglobulin gamma Fc region receptor III-negative, and CD24-negative." [GOC:add, GOC:amm, GOC:tfm, http://www.cap.org, ISBN:0721601464] | ||
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Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000763(myeloid cell),CL:0002191(granulocytopoietic cell),CL:0002242(nucleate cell) |
|---|---|
| develops_from: | CL:0000835(myeloblast) |
Children
| derives from: | FF:0000144 (human promyelocyte/myelocyte sample) |
|---|---|
| develops from: | CL:0002193 (myelocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Mouse (Mus musculus)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000836 (promyelocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
