CL:0000627: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=transporting cell | |name=transporting cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:35, 12 September 2014
| Name: | transporting cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell involved in transporting nutrients, minerals, water, gases and other chemicals between cells for a variety of purposes including conveying nutrition to other tissues, removing waste products from the tissues, conveying gases for respiration, distributing heat and repelling invasion of foreign substances." [TAIR:sr] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000003(native cell) |
|---|
Children
| is a: | CL:0000682 (M cell of gut) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11845-124H9 (GP2+ M cell, pool1)
- 11846-124I1 (GP2+ M cell, pool2)
- 11847-124I2 (GP2+ M cell, pool3)
Mouse (Mus musculus)
- 11845-124H9 (GP2+ M cell, pool1)
- 11846-124I1 (GP2+ M cell, pool2)
- 11847-124I2 (GP2+ M cell, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000627 (transporting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
