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FFCP PHASE1:Mm9::chr15:27955649..27955679,-: Difference between revisions

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(Created page with "{{FFCP |id=chr15:27955649..27955679,- |short_description=p2@Trio |description=CAGE_peak_2_at_Trio_5end |association_with_transcript=-46bp_to_ENSMUST00000090247,NM_00108130...")
 
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{{FFCP
{{FFCP
|id=chr15:27955649..27955679,-
|DHSsupport=NA
|short_description=p2@Trio
|DPIdataset=NA
|description=CAGE_peak_2_at_Trio_5end
|association_with_transcript=-46bp_to_ENSMUST00000090247,NM_001081302,uc007vjw.1_5end
|EntrezGene=223435
|EntrezGene=223435
|HGNC=
|HGNC=
|MCL_coexpression_id=959
|TSSclassifier=NA
|UniProt=Q0KL02
|UniProt=Q0KL02
|association_with_transcript=-46bp_to_ENSMUST00000090247,NM_001081302,uc007vjw.1_5end
|cluster_id=chr15:27955649..27955679,-
|description=CAGE_peak_2_at_Trio_5end
|id=chr15:27955649..27955679,-
|ontology_enrichment_celltype=CL:0000540!1.29e-12!33;CL:0000047!1.29e-12!33;CL:0000031!1.29e-12!33;CL:0000404!1.29e-12!33;CL:0000393!5.90e-12!39;CL:0000211!5.90e-12!39;CL:0002319!4.76e-10!43;CL:0000221!5.95e-10!44;CL:0000133!5.95e-10!44;CL:0000055!1.76e-09!50;CL:0000117!4.46e-09!23;CL:0000337!4.46e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0000393,5.77e-12,39;CL:0000211,5.77e-12,39;CL:0002319,4.68e-10,43;CL:0000221,5.84e-10,44;CL:0000133,5.84e-10,44;CL:0000117,4.39e-09,23;CL:0000337,4.39e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.80e-20,75;UBERON:0004121,2.84e-19,95;UBERON:0000924,2.84e-19,95;UBERON:0006601,2.84e-19,95;UBERON:0001017,4.40e-19,73;UBERON:0002346,3.66e-15,64;UBERON:0003075,3.66e-15,64;UBERON:0007284,3.66e-15,64;UBERON:0000073,2.04e-14,54;UBERON:0003056,4.56e-14,49;UBERON:0010314,4.65e-14,92;UBERON:0010371,4.96e-14,73;UBERON:0001049,9.48e-14,52;UBERON:0005068,9.48e-14,52;UBERON:0006241,9.48e-14,52;UBERON:0007135,9.48e-14,52;UBERON:0003080,9.56e-14,40;UBERON:0002780,1.65e-13,39;UBERON:0001890,1.65e-13,39;UBERON:0006240,1.65e-13,39;UBERON:0000955,2.22e-13,47;UBERON:0006238,2.22e-13,47;UBERON:0002020,3.11e-13,34;UBERON:0002616,3.65e-13,46;UBERON:0003528,1.25e-12,29;UBERON:0002791,1.25e-12,29;UBERON:0001893,1.25e-12,29;UBERON:0000956,3.46e-10,21;UBERON:0001869,3.46e-10,21;UBERON:0000203,3.46e-10,21;UBERON:0000922,3.88e-09,320;UBERON:0002619,9.14e-08,17;UBERON:0000025,1.53e-07,114;UBERON:0004111,6.78e-07,122
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|phase1_expression=6.72625157840135,2.09385244583617,4.09499315450582,2.41971369045464,3.00537437967808,6.04365378882803,2.33612640595526,0.774739940649458,3.23814060948833,1.87251621057595,0.856089841127525,0.638177271962691,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.473193248037357,0.137114433605739,0,6.20816018102809,0.992909512008853,0.783599367416806,1.27993938234725,1.14704640533585,2.29692785646008,2.58457197695445,1.07735616342945,2.28028103347649,3.02436155711917,3.32595765982957,0,0,0,1.73310971850765,2.65975432573588,5.3084032628216,0,0,0,0,0,0,9.9458486200706,12.0638548151222,7.89251034295231,1.56478268869608,3.2703773457067,3.29529274101708,6.22175677037707,7.97922603264566,4.31257693094915,0,0,0.336093799142464,6.94600477297057,5.44413535883638,5.15672092277442,21.8501777728366,21.6886301501533,23.4517619297286,4.40497891689872,2.66788438833342,1.7997994345628,4.94433181283487,1.4209602298922,4.49400165777607,6.14749288514487,20.841612074004,24.9760985913628,23.7667206327062,7.7125765789027,5.30084498283872,20.8234358665422,26.9325773561244,24.8189072384706,13.2139057199266,10.4703617229854,6.29786786350598,30.0700736024842,25.3420772778675,20.8365348222704,7.81712397203867,7.31591393041184,8.70950012327818,13.5529149317887,11.3897344639282,21.8087351615602,18.0228340132978,20.6310359091524,18.2614627882057,4.30211938490693,5.439770669662,2.69851595818909,1.94932925234301,3.13618820968135,3.65155492342555,3.2381761289831,3.89679006904303,1.41335829804136,7.04217098883402,3.84979432242953,2.54805239706646,14.2213340630666,6.061749148314,4.81383744402687,2.52762222507392,3.08296475241462,0.776813650941515,5.34391700633369,7.98032503124225,7.91610243611567,5.99600292865752,6.33035090321015,6.70255630673517,4.90099706185734,7.41584903203122,3.61498392299779,2.65383165584962,10.3530783966342,4.85851340612866,5.33362778448744,9.31958806090611,30.1564220921894,18.0124167859571,3.83185582812887,1.67741174308288,1.19980546198682,1.65191295194984,10.6351353977424,12.8100168789215,19.7277332817197,18.4253779403813,17.6443665557928,16.8308316093244,13.4660248346239,6.51771928642024,2.61254638281195,4.29628689337247,2.52530227063769,9.88915366516548,10.1156925950728,8.28285797104606,12.0563854268572,10.0694018743965,9.22418786050918,13.118241438362,6.20888089773638,9.7005596819779,12.6701073712439,15.4836989264275,10.302199424096,6.67313398141435,14.2783388274088,8.84863186554157,12.9372273432021,0.702213187313235,1.02939162845886,1.42081749697796,10.7705401718461,9.14651633926275,9.36322719597277,8.75955521665278,9.24791889212798,9.2560267732427,8.37122201101468,7.24338183778972,7.35621656913168,6.58239399653922,6.56669856316381,8.02581214503972,8.18719929581861,7.46470391989572,6.03928884421673,16.8231958851302,17.6995933292369,0.660837565967596,2.3800550999719,11.5175655289026,10.4506502337197,9.53619213783491,7.46229041106367,7.56085349072559,6.08722003560189,3.79623249235609,3.78807595865225,4.52403375840485,2.38747766449381,4.67913809085888,6.29173586057955,2.59365659849633,3.58454291857861,5.69003702859245,8.11164439529075,9.01661885384643,6.92414514674068,7.37019451236978,6.59276706968994,6.13394410105296,3.24742325555125,4.39596437955849,4.44229790118482,2.66807364378434,3.83743743147016,5.50365186316968,3.59779379815766,3.85434230638156,2.894125917029,2.29163266603278,4.89083433666378,2.2698931748505,2.47105271869273,17.2521847832825,2.60498663367952,4.36852742360385,3.53610429125956,5.02312757861354,3.37710464954357,5.35784251483154,7.57965647081939,8.31121379854332,8.48725428875941,8.91822943496308,10.2178817039508,8.33152743101048,8.19561321002755,8.82756806994669,5.75808193086815,7.97273843287435,4.09658286789345,4.48980952851328,4.62876987460837,1.50791283939272,1.63171705145613,0.983528546038072,3.86311444826625,6.10092241953609,8.90808818100744,4.26230857979356,5.30188947129183,10.4117712407365,9.76096860741596,12.7099804662351,18.161628644394,19.6062833192507,20.0984336860071,18.6212922770451,14.3205370376543,16.9973744517005,10.2822821254978,8.65834519770439,7.47875535402472,5.04949573996086,11.2179683621324,5.30980553359851,7.52619972080442,6.04647113929502,3.01768127609437,4.13422650033082,6.14870295887855,6.97756391554197,4.72593848320757,5.34746067577082,3.79244109522979,3.16255825724996,5.15677716240934,11.234506989875,7.92268813737765,6.98536892426874,8.3591443662321,9.93105308396732,11.0588666913284,9.3792941743209,5.78483403317739,7.97883807416615,7.62595455109753,2.8668691747145,5.11147384118588,9.52640117505843,11.0975781867807,8.71418111222896,8.37118588699812,4.95517422270746,6.11903496634682,2.05045056957423,6.60437977482312,5.00025223898222,0.376736914009382,1.50363650493128,1.14389086603261,3.90950388985867,4.05859211738608,4.28419918793714,0,8.06656783631895,12.4024874947378,9.18045396985311,7.3180903605064,5.8957892211468,6.06889558731693,5.86839535649885,1.83229159388821,6.99920855775682,3.10669656543463,1.12738587736838,11.5127740453864,5.12921320417003,8.94475466382619,7.4912697617084,6.58928889414035,7.04143431874524,6.51021924219751,2.83120229949419,1.20792060413003,0.576060012515731,0.632022241256357,6.08175645870493,3.80030541509861,2.5984164595559,3.75956060901711,3.17890167650024,1.44234539423963,0.738447635872886,0.908698049533329,0.685861259894999,0.907435666231565,0.974578807397524,0.962118416403295,0.467507608726276,5.8949899739955,7.76950836809226,7.35653624197701,6.71538465456314,6.95482538515886,7.69498149349846,6.59345847362154,10.0753138167161,3.00943262421218,19.2015626489803,17.0320337507655,11.4579102687879,17.1853182343688,13.7016503954128,25.6833925112498,12.8254275044043,16.2115633160719,22.203978040226,20.192652158321,6.33102820263478,7.98049746802062,12.4635532200518,17.0174701947806,8.38452650511929,7.90527086335061,14.0015438515018,13.598313777767,16.3668796891826,11.6240717411347,12.673964994512,15.2787336522722,10.4878488366268,13.701382614642,13.0378514529242,13.3362233559261,13.7902347874378,12.3461901096771,9.89006161927936,15.3086876939773,14.4005086001874,8.5188386956482,9.53744759789284,12.4997918303803,13.5517507798076,13.1152642232099,11.7073902638574,8.94437018888666,9.91370031074791,16.2731258780744,14.5921072292734,11.6235289203165,11.4584692087513,9.60608415352989,13.696369379661,22.2331414364772,15.439486157397,7.30561583764214,11.6685882561994,7.72069966918304,6.4922993973718
|short_description=p2@Trio
}}
}}

Latest revision as of 16:48, 26 September 2015

Short description:p2@Trio
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trio_5end
Coexpression cluster:MCL_coexpression_mm9:959
Association with transcript: -46bp_to_ENSMUST00000090247, NM_001081302, uc007vjw.1_5end
EntrezGene:Trio
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trio

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C321.85
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.81
Mouse Schwann, donor1.CNhs12507.11728-123D918.02
Mouse Schwann, donor2.CNhs12573.11746-123F920.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F510.35
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B230.16
cerebellum, neonate N30.CNhs11135.1395-42I218.01
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F119.73
cortex, adult.CNhs10473.12-14D518.43
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B213.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C610.07
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B58.85
gonad, embryo E13.CNhs11044.1564-45I612.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E910.77
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.36
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G16.57
heart, neonate N16.CNhs11209.782-15G18.03
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G117.70
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D89.54
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G76.59
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H15.02
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A610.22
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E58.83
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B99.93
pituitary gland, embryo E16.CNhs11036.449-43F611.06
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H311.10
skin, neonate N06.CNhs11097.693-20I58.71
skin, neonate N10.CNhs11108.762-6C48.37
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G812.40
stomach, embryo E16.CNhs11022.459-17D49.18
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.49
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.61
whole body, embryo E17.5.CNhs10513.490-9F913.70
whole body, embryo E17.CNhs10517.475-3I522.23
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.26e-1233
neuronal stem cell1.26e-1233
neuroblast1.26e-1233
electrically signaling cell1.26e-1233
electrically responsive cell5.77e-1239
electrically active cell5.77e-1239
neural cell4.68e-1043
ectodermal cell5.84e-1044
neurectodermal cell5.84e-1044
CNS neuron (sensu Vertebrata)4.39e-0923
neuroblast (sensu Vertebrata)4.39e-0923

Uber anatomy
Ontology termp-valuen
nervous system2.80e-2075
ectoderm-derived structure2.84e-1995
ectoderm2.84e-1995
presumptive ectoderm2.84e-1995
central nervous system4.40e-1973
neurectoderm3.66e-1564
neural plate3.66e-1564
presumptive neural plate3.66e-1564
regional part of nervous system2.04e-1454
pre-chordal neural plate4.56e-1449
structure with developmental contribution from neural crest4.65e-1492
ecto-epithelium4.96e-1473
neural tube9.48e-1452
neural rod9.48e-1452
future spinal cord9.48e-1452
neural keel9.48e-1452
anterior neural tube9.56e-1440
regional part of forebrain1.65e-1339
forebrain1.65e-1339
future forebrain1.65e-1339
brain2.22e-1347
future brain2.22e-1347
gray matter3.11e-1334
regional part of brain3.65e-1346
brain grey matter1.25e-1229
regional part of telencephalon1.25e-1229
telencephalon1.25e-1229
cerebral cortex3.46e-1021
cerebral hemisphere3.46e-1021
pallium3.46e-1021
embryo3.88e-09320
regional part of cerebral cortex9.14e-0817
tube1.53e-07114
anatomical conduit6.78e-07122
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