FFCP PHASE1:Mm9::chr15:25773040..25773100,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:25773040..25773100,+
|short_description=p1@Fam134b
|description=CAGE_peak_1_at_Fam134b_5end
|association_with_transcript=21bp_to_ENSMUST00000022881,NM_001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66270 | |EntrezGene=66270 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt=E9QPM1,Q8VE91 | |UniProt=E9QPM1,Q8VE91 | ||
|association_with_transcript=21bp_to_ENSMUST00000022881,NM_001034851,uc007vjf.1_5end | |||
|cluster_id=chr15:25773040..25773100,+ | |||
|description=CAGE_peak_1_at_Fam134b_5end | |||
|id=chr15:25773040..25773100,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.10e-08!12;CL:0000791!2.07e-07!9;CL:0000789!2.07e-07!9;CL:0002420!2.07e-07!9;CL:0002419!2.07e-07!9;CL:0000790!2.07e-07!9;CL:0000084!2.72e-07!11;CL:0000827!2.72e-07!11;CL:0000624!9.02e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.67e-08,12;CL:0000791,1.94e-07,9;CL:0000789,1.94e-07,9;CL:0002420,1.94e-07,9;CL:0002419,1.94e-07,9;CL:0000790,1.94e-07,9;CL:0000084,2.55e-07,11;CL:0000827,2.55e-07,11;CL:0000624,8.50e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.25e-13!102;UBERON:0000924!9.25e-13!102;UBERON:0006601!9.25e-13!102;UBERON:0000073!3.17e-12!75;UBERON:0001016!3.17e-12!75;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0007811!1.38e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0001049!8.21e-09!52;UBERON:0005068!8.21e-09!52;UBERON:0006241!8.21e-09!52;UBERON:0007135!8.21e-09!52;UBERON:0000955!1.16e-08!50;UBERON:0006238!1.16e-08!50;UBERON:0002616!3.10e-08!49;UBERON:0000033!4.64e-08!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.89e-14,95;UBERON:0000924,2.89e-14,95;UBERON:0006601,2.89e-14,95;UBERON:0001016,2.83e-12,75;UBERON:0001017,1.04e-11,73;UBERON:0010371,3.63e-10,73;UBERON:0000073,2.13e-09,54;UBERON:0001049,7.57e-09,52;UBERON:0005068,7.57e-09,52;UBERON:0006241,7.57e-09,52;UBERON:0007135,7.57e-09,52;UBERON:0000955,1.14e-07,47;UBERON:0006238,1.14e-07,47;UBERON:0002346,1.29e-07,64;UBERON:0003075,1.29e-07,64;UBERON:0007284,1.29e-07,64;UBERON:0002616,2.95e-07,46 | |||
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|phase1_expression=8.32774004944929,0.348975407639361,0,0.30246421130683,0.500895729946347,4.02910252588535,2.80335168714631,52.2949459938384,123.753286771315,113.287230739845,34.7572475497775,18.5869130459134,45.0257919719071,47.9938009280296,1.66554880907831,5.06188168474565,0,21.4514272443602,23.5836825801871,19.5219239827094,11.3958008802433,6.45391182805754,8.097193463307,3.51983330145495,4.35877634027623,1.14846392823004,0.86152399231815,0.646413698057667,4.56056206695297,3.78045194639896,3.99114919179548,0,0,0,2.3108129580102,0.997407872150954,1.83752420636132,9.62622750694888,8.5946887897618,5.75876118371178,21.1763335691165,19.8083190637949,9.71020706062307,1.1330713617802,1.01376931219515,1.10128051297009,3.12956537739216,2.61630187656536,6.15121311656521,6.61061656852564,0.419959264876088,1.43752564364972,30.536434302508,58.7543335029189,25.8792225339697,0.514518872071894,0.573066879877513,1.54701627683233,2.63011399117477,4.7609188134483,4.43681982454325,2.03306719241479,3.55717918444456,3.1496490104849,2.96659908770092,5.6838409195688,4.49400165777607,3.45796474789399,2.28117147078651,2.02508907497536,2.10324961351382,10.2834354385369,8.83474163806454,1.22490799214954,1.24599112323707,1.83843757322004,11.0115880999389,15.0671058940522,15.2070467923681,5.80299666012853,5.12330804173494,2.6045668527838,13.6799669510677,12.9435400307286,13.2934475565825,11.1958862479994,11.5321061447273,6.33758115806022,9.46577416664801,11.5624486963382,4.63783181922684,0,0,0,0,0,5.75822122540183,0.170430322578058,0,0.70667914902068,24.0842247818124,0,0,0,1.73192832808971,1.52015919285059,1.01104889002957,7.19358442230078,22.0097201100096,3.71105347662062,2.77576522825817,3.34912026143355,1.38369298353635,3.3158980921577,3.64524992120685,1.75933227861546,22.7419370315624,2.31358971071859,1.76922110389975,4.36770494858005,3.75430581382669,5.33362778448744,5.59175283654366,10.8328894894272,11.3101221679266,1.27728527604296,5.51149572727233,2.99951365496704,5.08280908292259,20.8208988772704,22.8750301409313,8.41884159156192,16.339486098074,15.5986428971502,24.9345653471472,19.6311928311987,2.44414473240759,6.84238338355512,8.33985102831127,3.15662783829711,2.47228841629137,1.14951052216736,2.16074555766419,1.65775299619287,4.89862793889561,2.562274405697,3.18585863503078,7.76110112217047,1.29340795759705,2.45837904218165,1.23165786914764,0.219195732427575,2.22437799380478,6.96504333044333,12.5527103208846,0.796137067273973,2.1066395619397,0.772043721344145,1.42081749697796,2.27838349789052,2.11073453982987,3.06105504483725,2.13070262026689,4.72234156193769,4.16521204795921,3.0229412817553,5.09719462659276,1.86824547787471,2.79751744852917,3.77585167381919,3.97237166774693,5.11699955988663,4.39100230582101,4.16039898157152,18.2952255250791,6.07137213037778,0.660837565967596,1.58670339998127,0.213288250535234,0.928946687441754,0.902072229254653,1.21010114774006,1.77902435075896,1.33157938278791,2.37264530772256,1.64698954724011,1.50801125280162,4.17808591286417,3.31438948102504,1.79763881730844,4.53889904736858,6.96994456390285,2.27601481143698,2.97046132785295,6.76246414038483,4.68398054044223,3.87904974335251,9.18779240563173,15.0502958355732,13.2849133181642,16.9558626068685,25.5432129318127,0,0.333690211432188,0,0.224862112384854,0.405720242777006,0,0.50925170356284,0.575392274901621,1.45921704097532,0.549122826376163,0,2.60498663367952,0.624075346229121,0.252578877947112,0.358794827043824,0,16.9972934953276,0.947457058852424,2.11854469374634,2.71592137240301,2.11221223459652,5.69521275302174,11.6641384034147,21.2695676165001,11.1920952315396,11.9590932410338,15.9454768657487,14.4199716949849,10.7064688756855,18.5150794984335,10.5553898757491,7.07077388964322,8.85175691434265,11.313406598494,20.068823748474,20.3948334670434,0.819674726883377,1.51482556322624,5.04813151066011,8.98009111882268,15.2950612390287,14.3381278771531,17.1554979043443,17.2676683781188,8.50102473517278,9.9366991689846,15.4162233399144,18.315315036043,2.41298144854057,1.95872164033981,2.76907830901079,7.4236555337641,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0,2.32585463851399,1.09060118843252,3.92147116223193,1.58018378967908,1.05418608574999,4.12542172992747,13.2771446243977,3.6012218806262,2.71653235943784,6.21577401591618,4.61084607469911,8.02659679209317,9.70839221552514,13.700922710157,2.11204537257339,5.08396970073168,30.2123905335298,7.09010887648364,18.2454802166373,12.5450883850564,13.0115854963419,10.0125948844487,2.04036585640896,25.0324157714188,6.32222258952055,0.619160603889667,1.66675074632741,3.76736914009382,5.60446333656203,7.32090154260872,13.4282959695146,12.7355821614529,14.5109972494645,6.68269432610579,0.632671987162271,2.03319467126849,1.62008011232702,2.50905955217362,3.71216358368502,6.47348862647139,6.19900917940019,4.71160695571253,5.70305882483889,17.3975007664339,4.50954350947352,0.299033092087958,0.992750942742586,0.583353565032143,0.774958940866387,0.844780627453891,2.58185925020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| ||
|short_description=p1@Fam134b | |||
}} | }} |
Latest revision as of 16:22, 26 September 2015
Short description: | p1@Fam134b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam134b_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 21bp_to_ENSMUST00000022881, NM_001034851, uc007vjf.1_5end |
EntrezGene: | Fam134b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.67e-08 | 12 |
mature alpha-beta T cell | 1.94e-07 | 9 |
alpha-beta T cell | 1.94e-07 | 9 |
immature T cell | 1.94e-07 | 9 |
mature T cell | 1.94e-07 | 9 |
immature alpha-beta T cell | 1.94e-07 | 9 |
T cell | 2.55e-07 | 11 |
pro-T cell | 2.55e-07 | 11 |
CD4-positive, alpha-beta T cell | 8.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.89e-14 | 95 |
ectoderm | 2.89e-14 | 95 |
presumptive ectoderm | 2.89e-14 | 95 |
nervous system | 2.83e-12 | 75 |
central nervous system | 1.04e-11 | 73 |
ecto-epithelium | 3.63e-10 | 73 |
regional part of nervous system | 2.13e-09 | 54 |
neural tube | 7.57e-09 | 52 |
neural rod | 7.57e-09 | 52 |
future spinal cord | 7.57e-09 | 52 |
neural keel | 7.57e-09 | 52 |
brain | 1.14e-07 | 47 |
future brain | 1.14e-07 | 47 |
neurectoderm | 1.29e-07 | 64 |
neural plate | 1.29e-07 | 64 |
presumptive neural plate | 1.29e-07 | 64 |
regional part of brain | 2.95e-07 | 46 |