FFCP PHASE1:Mm9::chr14:76904313..76904328,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:76904313..76904328,+
|short_description=p1@Tsc22d1
|description=CAGE_peak_1_at_Tsc22d1_5end
|association_with_transcript=0bp_to_ENSMUST00000022587,NM_0093...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21807 | |EntrezGene=21807 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P62500,Q3UXU0 | |UniProt=P62500,Q3UXU0 | ||
|association_with_transcript=0bp_to_ENSMUST00000022587,NM_009366,uc007urk.2_5end | |||
|cluster_id=chr14:76904313..76904328,+ | |||
|description=CAGE_peak_1_at_Tsc22d1_5end | |||
|id=chr14:76904313..76904328,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.40e-09!71;UBERON:0003075!1.40e-09!71;UBERON:0007284!1.40e-09!71;UBERON:0001049!8.32e-08!52;UBERON:0005068!8.32e-08!52;UBERON:0006241!8.32e-08!52;UBERON:0007135!8.32e-08!52;UBERON:0002780!3.81e-07!39;UBERON:0001890!3.81e-07!39;UBERON:0006240!3.81e-07!39;UBERON:0003080!6.77e-07!40;UBERON:0002020!8.79e-07!34;UBERON:0003056!9.88e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.63e-09,92;UBERON:0001049,8.32e-08,52;UBERON:0005068,8.32e-08,52;UBERON:0006241,8.32e-08,52;UBERON:0007135,8.32e-08,52;UBERON:0000073,3.66e-07,54;UBERON:0002780,3.81e-07,39;UBERON:0001890,3.81e-07,39;UBERON:0006240,3.81e-07,39;UBERON:0003080,6.77e-07,40;UBERON:0002020,8.79e-07,34;UBERON:0003056,9.88e-07,49 | |||
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| ||
|short_description=p1@Tsc22d1 | |||
}} | }} |
Latest revision as of 10:17, 26 September 2015
Short description: | p1@Tsc22d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tsc22d1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000022587, NM_009366, uc007urk.2_5end |
EntrezGene: | Tsc22d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 8.63e-09 | 92 |
neural tube | 8.32e-08 | 52 |
neural rod | 8.32e-08 | 52 |
future spinal cord | 8.32e-08 | 52 |
neural keel | 8.32e-08 | 52 |
regional part of nervous system | 3.66e-07 | 54 |
regional part of forebrain | 3.81e-07 | 39 |
forebrain | 3.81e-07 | 39 |
future forebrain | 3.81e-07 | 39 |
anterior neural tube | 6.77e-07 | 40 |
gray matter | 8.79e-07 | 34 |
pre-chordal neural plate | 9.88e-07 | 49 |