FFCP PHASE1:Mm9::chr14:19103715..19103804,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:19103715..19103804,+
|short_description=p1@Nkiras1
|description=CAGE_peak_1_at_Nkiras1_5end
|association_with_transcript=0bp_to_ENSMUST00000022294,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69721 | |EntrezGene=69721 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=F8WIJ8 | |UniProt=F8WIJ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000022294,ENSMUST00000145355,ENSMUST00000150209,ENSMUST00000152735,ENSMUST00000156186_5end | |||
|cluster_id=chr14:19103715..19103804,+ | |||
|description=CAGE_peak_1_at_Nkiras1_5end | |||
|id=chr14:19103715..19103804,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.13e-10!122;UBERON:0000025!2.63e-10!114;UBERON:0001049!1.05e-09!52;UBERON:0005068!1.05e-09!52;UBERON:0006241!1.05e-09!52;UBERON:0007135!1.05e-09!52;UBERON:0000955!5.32e-09!50;UBERON:0006238!5.32e-09!50;UBERON:0002020!1.30e-08!34;UBERON:0002616!1.47e-08!49;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0000033!2.47e-07!63;UBERON:0001017!5.52e-07!73;UBERON:0005743!5.52e-07!73;UBERON:0000073!7.92e-07!75;UBERON:0001016!7.92e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.13e-10,122;UBERON:0000073,1.25e-10,54;UBERON:0000025,2.63e-10,114;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0010314,3.54e-09,92;UBERON:0002020,1.30e-08,34;UBERON:0002021,9.02e-08,10;UBERON:0000411,9.02e-08,10;UBERON:0001950,9.02e-08,10;UBERON:0000955,1.31e-07,47;UBERON:0006238,1.31e-07,47;UBERON:0002616,3.41e-07,46;UBERON:0001017,5.52e-07,73;UBERON:0001016,7.92e-07,75 | |||
|phase1_expression=12.0111635328595,23.3813523118372,20.0199665331396,31.7587421872172,26.5474736871564,11.9194283057442,13.315920513945,9.03863264091034,6.05391505252167,3.97909694747389,8.56089841127525,7.0199499915896,8.38883576662908,10.7527094975367,4.99664642723494,5.4668322195253,3.49780939064073,4.57420139769445,4.11343300817216,3.39511721438424,22.5364718900335,4.66667470644161,5.74639536105658,16.4792195477209,17.4351053611049,24.1177424928308,19.8150518233174,15.2984575206981,10.4512880701006,14.8697776558359,13.3038306393183,3.81018404075779,1.84519436275371,0,8.95440021228951,6.64938581433969,6.94175811292055,4.60384793810598,2.3440060335714,5.23523743973798,3.52938892818609,4.09827290975067,4.36959317728038,13.3450627054112,13.4831318521954,4.77221555620372,3.12956537739216,4.36050312760893,5.93152693383074,7.38833616482277,6.85933465964276,2.87505128729943,5.5368259999053,7.25362142011344,6.04968838456435,5.40244815675489,6.01720223871389,10.8291139378263,11.5320382689971,10.5798195854407,6.33831403506179,3.38844532069132,1.77858959222228,2.6996991518442,2.96659908770092,2.8419204597844,5.69240209984969,3.45796474789399,7.05089363697648,7.42532660824299,5.25812403378455,35.7063730504754,36.8850463389195,7.4719387521122,4.69642807989358,5.51531271966013,47.3498288297371,71.7602840038755,66.6652354332097,11.0784481693363,15.3699241252048,14.0646610050325,88.7801936824391,69.2198010338966,47.6730533063648,26.2219441071564,31.0370264142044,22.1815340532108,8.32988126665025,7.3304413303582,12.1743085254705,17.2084775396277,9.51959867190851,29.1439723484421,18.8435161059824,21.5052905806721,33.7066608316204,4.94247935476367,7.53379413348319,4.24007489412408,11.1266301623578,3.84979432242953,5.09610479413291,14.2213340630666,5.41227602528035,6.33399663687746,5.05524445014783,24.3211663801598,6.47344709117929,13.0629082377046,6.93941307064543,8.52503339273995,8.99400439298628,10.8520301197888,7.64326596382081,12.0639927676488,4.94389935468748,16.9181247596297,9.73071607144862,23.1326595424795,14.7963817368464,9.69750506270444,5.59175283654366,40.6965307846051,37.281513812795,10.9846533739694,4.79260498023681,3.59941638596045,3.93917703926501,70.7011817990763,54.9000723382352,9.1727677042391,78.3947684067167,90.523271894937,78.1283047543946,60.0292673350703,4.48093200941392,9.70374370758726,11.625246887949,14.9413717679397,4.42409506073193,6.20735681970377,4.86167750474443,8.89158425230719,5.30684693380357,5.12454881139399,4.96619140166563,12.4177617954728,3.23351989399263,4.72765200419548,5.27853372491847,4.82230611340665,5.83899223373756,8.70630416305416,9.4659782747654,6.96619933864726,7.02213187313235,3.60287069960601,3.9782889915383,5.38527008592305,8.20841209933837,11.523971933505,10.180023630164,12.3961466000864,11.415766353666,16.509910077279,11.5357562601836,12.8441876603886,17.6079039407424,24.7892870759434,34.292106437897,41.9593963910704,36.0062189077323,27.3781094271158,60.9840850835969,9.57012895127345,15.8601015832223,13.4869788998408,3.41261200856374,3.94802342162745,4.63922860759536,4.23535401709019,5.11469500843202,9.3210556795154,9.01605216934572,8.07024878147653,9.80207314321051,6.56556357735798,10.1381325301942,12.5834717211591,11.2391785934841,11.7493351220077,3.98302592001472,5.59817711787671,4.50830942692322,5.7022371796688,6.0125271021964,5.47059395144485,9.54871710576285,16.0895061297766,17.7408562460754,15.9182341459123,23.7162101669719,6.34011401721157,5.70021085828289,4.72210436008193,6.6943840058206,6.51178331331525,8.91190481234969,6.90470729881945,11.3494658742525,16.748246204473,17.2521847832825,15.2577788544086,23.7148631567066,21.4692046255045,20.451305141498,9.16642690590398,8.31389355749721,4.54779388249163,4.72598431681875,4.58311731593008,6.57132695207806,4.18765643604539,4.76087281772027,6.43941037930736,5.2019597555043,7.30833475840957,7.17546458958692,10.4872521418072,10.0157289482219,12.150520920847,3.01582567878545,3.26343410291226,11.3105782794378,9.3818493743609,92.4771398329682,98.4578167374507,3.11476396215683,39.6379355710866,7.2566890465739,3.90438744296638,6.67812532971677,3.34556317133573,4.45597348164788,7.07691326972081,6.8817819284732,6.72188473196017,9.88219444866309,37.5945940213514,6.95506417520516,5.1639025063504,5.53815661802159,7.09371528781903,10.619611067197,4.37005145078967,4.53485335447127,9.43025398779491,6.20133975049623,7.68587869859819,6.71913562237375,7.99774204850512,7.48644494607915,11.6933600436252,6.32511651449993,9.28219889233682,28.5969268833182,3.6012218806262,4.91562998374467,6.00143698088458,13.1231772895282,11.0588666913284,13.1639216481697,5.17590413494819,5.16277757740163,11.6507638975101,10.5853631066382,12.036696464728,10.4951877352339,8.14224486530104,5.61050016814741,6.72977688954751,7.57850175237612,95.8648811394335,3.93003025835061,6.3979929068599,2.59272338317596,4.89757988212197,3.69074414846768,3.20289442489132,5.26933132980952,5.45810664062266,5.66619892598138,8.59203556213602,4.27053591334533,4.26970880966382,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|phase1_expression=12.0111635328595,23.3813523118372,20.0199665331396,31.7587421872172,26.5474736871564,11.9194283057442,13.315920513945,9.03863264091034,6.05391505252167,3.97909694747389,8.56089841127525,7.0199499915896,8.38883576662908,10.7527094975367,4.99664642723494,5.4668322195253,3.49780939064073,4.57420139769445,4.11343300817216,3.39511721438424,22.5364718900335,4.66667470644161,5.74639536105658,16.4792195477209,17.4351053611049,24.1177424928308,19.8150518233174,15.2984575206981,10.4512880701006,14.8697776558359,13.3038306393183,3.81018404075779,1.84519436275371,0,8.95440021228951,6.64938581433969,6.94175811292055,4.60384793810598,2.3440060335714,5.23523743973798,3.52938892818609,4.09827290975067,4.36959317728038,13.3450627054112,13.4831318521954,4.77221555620372,3.12956537739216,4.36050312760893,5.93152693383074,7.38833616482277,6.85933465964276,2.87505128729943,5.5368259999053,7.25362142011344,6.04968838456435,5.40244815675489,6.01720223871389,10.8291139378263,11.5320382689971,10.5798195854407,6.33831403506179,3.38844532069132,1.77858959222228,2.6996991518442,2.96659908770092,2.8419204597844,5.69240209984969,3.45796474789399,7.05089363697648,7.42532660824299,5.25812403378455,35.7063730504754,36.8850463389195,7.4719387521122,4.69642807989358,5.51531271966013,47.3498288297371,71.7602840038755,66.6652354332097,11.0784481693363,15.3699241252048,14.0646610050325,88.7801936824391,69.2198010338966,47.6730533063648,26.2219441071564,31.0370264142044,22.1815340532108,8.32988126665025,7.3304413303582,12.1743085254705,17.2084775396277,9.51959867190851,29.1439723484421,18.8435161059824,21.5052905806721,33.7066608316204,4.94247935476367,7.53379413348319,4.24007489412408,11.1266301623578,3.84979432242953,5.09610479413291,14.2213340630666,5.41227602528035,6.33399663687746,5.05524445014783,24.3211663801598,6.47344709117929,13.0629082377046,6.93941307064543,8.52503339273995,8.99400439298628,10.8520301197888,7.64326596382081,12.0639927676488,4.94389935468748,16.9181247596297,9.73071607144862,23.1326595424795,14.7963817368464,9.69750506270444,5.59175283654366,40.6965307846051,37.281513812795,10.9846533739694,4.79260498023681,3.59941638596045,3.93917703926501,70.7011817990763,54.9000723382352,9.1727677042391,78.3947684067167,90.523271894937,78.1283047543946,60.0292673350703,4.48093200941392,9.70374370758726,11.625246887949,14.9413717679397,4.42409506073193,6.20735681970377,4.86167750474443,8.89158425230719,5.30684693380357,5.12454881139399,4.96619140166563,12.4177617954728,3.23351989399263,4.72765200419548,5.27853372491847,4.82230611340665,5.83899223373756,8.70630416305416,9.4659782747654,6.96619933864726,7.02213187313235,3.60287069960601,3.9782889915383,5.38527008592305,8.20841209933837,11.523971933505,10.180023630164,12.3961466000864,11.415766353666,16.509910077279,11.5357562601836,12.8441876603886,17.6079039407424,24.7892870759434,34.292106437897,41.9593963910704,36.0062189077323,27.3781094271158,60.9840850835969,9.57012895127345,15.8601015832223,13.4869788998408,3.41261200856374,3.94802342162745,4.63922860759536,4.23535401709019,5.11469500843202,9.3210556795154,9.01605216934572,8.07024878147653,9.80207314321051,6.56556357735798,10.1381325301942,12.5834717211591,11.2391785934841,11.7493351220077,3.98302592001472,5.59817711787671,4.50830942692322,5.7022371796688,6.0125271021964,5.47059395144485,9.54871710576285,16.0895061297766,17.7408562460754,15.9182341459123,23.7162101669719,6.34011401721157,5.70021085828289,4.72210436008193,6.6943840058206,6.51178331331525,8.91190481234969,6.90470729881945,11.3494658742525,16.748246204473,17.2521847832825,15.2577788544086,23.7148631567066,21.4692046255045,20.451305141498,9.16642690590398,8.31389355749721,4.54779388249163,4.72598431681875,4.58311731593008,6.57132695207806,4.18765643604539,4.76087281772027,6.43941037930736,5.2019597555043,7.30833475840957,7.17546458958692,10.4872521418072,10.0157289482219,12.150520920847,3.01582567878545,3.26343410291226,11.3105782794378,9.3818493743609,92.4771398329682,98.4578167374507,3.11476396215683,39.6379355710866,7.2566890465739,3.90438744296638,6.67812532971677,3.34556317133573,4.45597348164788,7.07691326972081,6.8817819284732,6.72188473196017,9.88219444866309,37.5945940213514,6.95506417520516,5.1639025063504,5.53815661802159,7.09371528781903,10.619611067197,4.37005145078967,4.53485335447127,9.43025398779491,6.20133975049623,7.68587869859819,6.71913562237375,7.99774204850512,7.48644494607915,11.6933600436252,6.32511651449993,9.28219889233682,28.5969268833182,3.6012218806262,4.91562998374467,6.00143698088458,13.1231772895282,11.0588666913284,13.1639216481697,5.17590413494819,5.16277757740163,11.6507638975101,10.5853631066382,12.036696464728,10.4951877352339,8.14224486530104,5.61050016814741,6.72977688954751,7.57850175237612,95.8648811394335,3.93003025835061,6.3979929068599,2.59272338317596,4.89757988212197,3.69074414846768,3.20289442489132,5.26933132980952,5.45810664062266,5.66619892598138,8.59203556213602,4.27053591334533,4.26970880966382,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| ||
|short_description=p1@Nkiras1 | |||
}} | }} |
Latest revision as of 18:12, 25 September 2015
Short description: | p1@Nkiras1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nkiras1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000022294, ENSMUST00000145355, ENSMUST00000150209, ENSMUST00000152735, ENSMUST00000156186_5end |
EntrezGene: | Nkiras1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.13e-10 | 122 |
regional part of nervous system | 1.25e-10 | 54 |
tube | 2.63e-10 | 114 |
neural tube | 1.05e-09 | 52 |
neural rod | 1.05e-09 | 52 |
future spinal cord | 1.05e-09 | 52 |
neural keel | 1.05e-09 | 52 |
structure with developmental contribution from neural crest | 3.54e-09 | 92 |
gray matter | 1.30e-08 | 34 |
occipital lobe | 9.02e-08 | 10 |
visual cortex | 9.02e-08 | 10 |
neocortex | 9.02e-08 | 10 |
brain | 1.31e-07 | 47 |
future brain | 1.31e-07 | 47 |
regional part of brain | 3.41e-07 | 46 |
central nervous system | 5.52e-07 | 73 |
nervous system | 7.92e-07 | 75 |