FFCP PHASE1:Mm9::chr14:106660467..106660471,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:106660467..106660471,-
|short_description=p1@ENSMUST00000083259
|description=CAGE_peak_1_at_ENSMUST00000083259_5end
|association_with_transcript=0bp_to_EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=432 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000083259_5end | |||
|cluster_id=chr14:106660467..106660471,- | |||
|description=CAGE_peak_1_at_ENSMUST00000083259_5end | |||
|id=chr14:106660467..106660471,- | |||
|ontology_enrichment_celltype=CL:0000548!4.26e-33!115;CL:0000004!4.26e-33!115;CL:0000255!4.26e-33!115;CL:0002371!9.65e-32!118;CL:0000144!1.58e-30!121;CL:0000012!1.58e-30!121;CL:0000723!1.61e-25!91;CL:0000048!1.61e-25!91;CL:0000034!3.35e-25!97;CL:0002321!5.41e-23!70;CL:0000220!5.41e-23!70;CL:0000055!4.18e-21!50;CL:0002319!1.36e-19!43;CL:0000221!1.44e-18!44;CL:0000133!1.44e-18!44;CL:0000393!2.56e-17!39;CL:0000211!2.56e-17!39;CL:0000540!2.48e-16!33;CL:0000047!2.48e-16!33;CL:0000031!2.48e-16!33;CL:0000404!2.48e-16!33;CL:0000219!4.29e-13!54;CL:0000117!3.21e-12!23;CL:0000337!3.21e-12!23;CL:0002320!1.30e-10!46;CL:0000134!1.30e-10!46;CL:0000063!4.62e-10!66;CL:0002031!1.38e-08!25;CL:0000763!5.22e-07!16;CL:0000839!6.10e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.77e-36,91;CL:0000048,4.77e-36,91;CL:0000034,1.48e-35,97;CL:0002321,1.58e-31,70;CL:0002319,4.50e-28,43;CL:0000221,4.34e-27,44;CL:0000133,4.34e-27,44;CL:0000540,5.49e-24,33;CL:0000047,5.49e-24,33;CL:0000031,5.49e-24,33;CL:0000404,5.49e-24,33;CL:0000393,3.44e-23,39;CL:0000211,3.44e-23,39;CL:0000219,2.59e-18,54;CL:0000117,2.51e-17,23;CL:0000337,2.51e-17,23;CL:0002320,3.64e-15,46;CL:0000134,3.64e-15,46;CL:0002031,2.12e-12,25;CL:0000839,1.58e-09,13;CL:0000988,5.21e-09,32;CL:0002032,5.21e-09,32;CL:0000037,5.21e-09,32;CL:0000837,5.21e-09,32;CL:0000107,8.36e-09,9;CL:0000763,4.34e-08,16;CL:0000050,2.58e-07,9;CL:0002453,5.48e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.05e-18!73;UBERON:0005743!5.05e-18!73;UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0002020!9.25e-13!34;UBERON:0002791!8.33e-11!29;UBERON:0003528!8.33e-11!29;UBERON:0001893!8.33e-11!29;UBERON:0004121!8.47e-11!102;UBERON:0000924!8.47e-11!102;UBERON:0006601!8.47e-11!102;UBERON:0002384!1.30e-10!46;UBERON:0002616!2.10e-09!49;UBERON:0000955!2.12e-09!50;UBERON:0006238!2.12e-09!50;UBERON:0001049!2.39e-09!52;UBERON:0005068!2.39e-09!52;UBERON:0006241!2.39e-09!52;UBERON:0007135!2.39e-09!52;UBERON:0000956!6.49e-09!21;UBERON:0001869!6.49e-09!21;UBERON:0000203!6.49e-09!21;UBERON:0002780!9.79e-09!39;UBERON:0001890!9.79e-09!39;UBERON:0006240!9.79e-09!39;UBERON:0003080!1.05e-08!40;UBERON:0002346!1.07e-08!71;UBERON:0003075!1.07e-08!71;UBERON:0007284!1.07e-08!71;UBERON:0003056!5.01e-08!49;UBERON:0002619!6.05e-08!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000033!1.24e-07!63;UBERON:0007811!3.71e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-22,73;UBERON:0001016,1.38e-21,75;UBERON:0002020,1.23e-18,34;UBERON:0003528,9.86e-16,29;UBERON:0002791,9.86e-16,29;UBERON:0001893,9.86e-16,29;UBERON:0002384,3.64e-15,46;UBERON:0004121,4.06e-14,95;UBERON:0000924,4.06e-14,95;UBERON:0006601,4.06e-14,95;UBERON:0000956,4.50e-13,21;UBERON:0001869,4.50e-13,21;UBERON:0000203,4.50e-13,21;UBERON:0000073,6.55e-13,54;UBERON:0002619,4.79e-12,17;UBERON:0001049,1.09e-10,52;UBERON:0005068,1.09e-10,52;UBERON:0006241,1.09e-10,52;UBERON:0007135,1.09e-10,52;UBERON:0002021,1.42e-10,10;UBERON:0000411,1.42e-10,10;UBERON:0001950,1.42e-10,10;UBERON:0002346,6.10e-10,64;UBERON:0003075,6.10e-10,64;UBERON:0007284,6.10e-10,64;UBERON:0002780,1.74e-09,39;UBERON:0001890,1.74e-09,39;UBERON:0006240,1.74e-09,39;UBERON:0003080,4.78e-09,40;UBERON:0002410,8.36e-09,9;UBERON:0002616,1.02e-08,46;UBERON:0000955,2.37e-08,47;UBERON:0006238,2.37e-08,47;UBERON:0011216,4.40e-08,194;UBERON:0002371,1.82e-07,16;UBERON:0010371,2.19e-07,73 | |||
|phase1_expression=0,0.348975407639361,2.27499619694768,3.32710632437513,8.5152274090879,0,2.10251376535973,6.19791952519566,4.92760527530834,12.6394844213876,2.39705155515707,2.39316476986009,4.79362043807376,4.19617931611188,40.6393909415109,2.22722794128809,9.79386629379405,2.20823515750766,4.66189074259512,16.5511964201232,0,1.39007331681239,1.30599894569468,0.47997726838022,0.91763712426868,0.57423196411502,0,0.215471232685889,1.71021077510736,0,0.886922042621219,254.647300057312,118.707504003822,491.29321114786,0,0,0.408338712524738,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.251793635951155,0.202753862439029,0.734187008646726,53.9850027600147,39.4625533048608,19.1126978978991,54.4403717407993,48.1553290391247,5.75010257459886,0,1.45072428402269,1.34437519656986,13.8920095459411,30.3725446335082,30.4246534443691,23.6710259205729,72.4717641602685,19.6487735086916,18.9752937958714,15.1180115338894,8.09909745553259,76.142709917657,48.3126478163348,14.6804054154018,9.22123932771731,4.97710139080693,48.6021377994086,24.8183454394631,16.8534080798244,9.718215801871,32.7050433903927,38.0506519942398,31.2534387447407,55.0579404996944,19.7915374032041,13.0565553267807,67.9214381810498,36.3205945101566,24.4829284161677,22.3346399201105,13.5063026407603,31.3236407942461,12.9636577608414,8.39992916714707,15.4711540034999,0.227178579999552,0.0755715601067855,3.47837386442013,7.74381489283248,28.5587960157255,17.2705021324101,57.8301011528426,76.6125976936444,0.140444420131752,0,2.07828803682295,0.70667914902068,0,1.28326477414318,2.54805239706646,7.11066703153331,2.38140145112336,3.29367825117628,11.1215377903252,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0.420883711772948,0.390361328888111,4.36813998423599,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,2.55747149456033,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0,0.467061369468678,0.493679549740441,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.494096864172033,0.251335208800269,0,0,2.69645822596266,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,2.80088436959562,0.287696137450811,0,0,0,0,0,0,0,0,0,2.4633883530163,0,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0.144649058581512,19.6028669121054,13.053736411649,0,0,0,0.117211686592203,0.163934945376675,0,23.347608236803,28.8924670779512,68.9354872744957,43.4923212273645,44.5597348164788,36.7999490025482,41.6955022725141,28.9333299332199,63.2460444714438,0.321321316421807,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0.992750942742586,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0.228620419965,0.201652370273681,0.0974578807397524,0,0,0,3.10780334723691,1.97370484540847,1.84673078000486,0,0,0,0.214368379079066,0.501572104035363,65.5112137435797,41.4292712856459,48.1232231289093,7.04598047609119,77.4143247340826,174.495990297021,70.8773625243396,61.6940048417182,67.9713613476307,78.1818070745248,0.103787347584177,0,0.682934423016537,0,0.419226325255965,1.10306105070008,0,0,0,0,0,0.188626341386076,0.468207537349412,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.789209134313529,0,1.12228454331548,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 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|phase1_expression=0,0.348975407639361,2.27499619694768,3.32710632437513,8.5152274090879,0,2.10251376535973,6.19791952519566,4.92760527530834,12.6394844213876,2.39705155515707,2.39316476986009,4.79362043807376,4.19617931611188,40.6393909415109,2.22722794128809,9.79386629379405,2.20823515750766,4.66189074259512,16.5511964201232,0,1.39007331681239,1.30599894569468,0.47997726838022,0.91763712426868,0.57423196411502,0,0.215471232685889,1.71021077510736,0,0.886922042621219,254.647300057312,118.707504003822,491.29321114786,0,0,0.408338712524738,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.251793635951155,0.202753862439029,0.734187008646726,53.9850027600147,39.4625533048608,19.1126978978991,54.4403717407993,48.1553290391247,5.75010257459886,0,1.45072428402269,1.34437519656986,13.8920095459411,30.3725446335082,30.4246534443691,23.6710259205729,72.4717641602685,19.6487735086916,18.9752937958714,15.1180115338894,8.09909745553259,76.142709917657,48.3126478163348,14.6804054154018,9.22123932771731,4.97710139080693,48.6021377994086,24.8183454394631,16.8534080798244,9.718215801871,32.7050433903927,38.0506519942398,31.2534387447407,55.0579404996944,19.7915374032041,13.0565553267807,67.9214381810498,36.3205945101566,24.4829284161677,22.3346399201105,13.5063026407603,31.3236407942461,12.9636577608414,8.39992916714707,15.4711540034999,0.227178579999552,0.0755715601067855,3.47837386442013,7.74381489283248,28.5587960157255,17.2705021324101,57.8301011528426,76.6125976936444,0.140444420131752,0,2.07828803682295,0.70667914902068,0,1.28326477414318,2.54805239706646,7.11066703153331,2.38140145112336,3.29367825117628,11.1215377903252,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0.420883711772948,0.390361328888111,4.36813998423599,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,2.55747149456033,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0,0.467061369468678,0.493679549740441,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.494096864172033,0.251335208800269,0,0,2.69645822596266,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,2.80088436959562,0.287696137450811,0,0,0,0,0,0,0,0,0,2.4633883530163,0,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0.144649058581512,19.6028669121054,13.053736411649,0,0,0,0.117211686592203,0.163934945376675,0,23.347608236803,28.8924670779512,68.9354872744957,43.4923212273645,44.5597348164788,36.7999490025482,41.6955022725141,28.9333299332199,63.2460444714438,0.321321316421807,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0.992750942742586,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0.228620419965,0.201652370273681,0.0974578807397524,0,0,0,3.10780334723691,1.97370484540847,1.84673078000486,0,0,0,0.214368379079066,0.501572104035363,65.5112137435797,41.4292712856459,48.1232231289093,7.04598047609119,77.4143247340826,174.495990297021,70.8773625243396,61.6940048417182,67.9713613476307,78.1818070745248,0.103787347584177,0,0.682934423016537,0,0.419226325255965,1.10306105070008,0,0,0,0,0,0.188626341386076,0.468207537349412,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.789209134313529,0,1.12228454331548,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000083259 | |||
}} | }} |
Latest revision as of 23:00, 3 August 2015
Short description: | p1@ENSMUST00000083259 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000083259_5end |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | 0bp_to_ENSMUST00000083259_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.77e-36 | 91 |
multi fate stem cell | 4.77e-36 | 91 |
stem cell | 1.48e-35 | 97 |
embryonic cell | 1.58e-31 | 70 |
neural cell | 4.50e-28 | 43 |
ectodermal cell | 4.34e-27 | 44 |
neurectodermal cell | 4.34e-27 | 44 |
neuron | 5.49e-24 | 33 |
neuronal stem cell | 5.49e-24 | 33 |
neuroblast | 5.49e-24 | 33 |
electrically signaling cell | 5.49e-24 | 33 |
electrically responsive cell | 3.44e-23 | 39 |
electrically active cell | 3.44e-23 | 39 |
motile cell | 2.59e-18 | 54 |
CNS neuron (sensu Vertebrata) | 2.51e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-17 | 23 |
connective tissue cell | 3.64e-15 | 46 |
mesenchymal cell | 3.64e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 2.12e-12 | 25 |
myeloid lineage restricted progenitor cell | 1.58e-09 | 13 |
hematopoietic cell | 5.21e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.21e-09 | 32 |
hematopoietic stem cell | 5.21e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.21e-09 | 32 |
autonomic neuron | 8.36e-09 | 9 |
myeloid cell | 4.34e-08 | 16 |
megakaryocyte-erythroid progenitor cell | 2.58e-07 | 9 |
oligodendrocyte precursor cell | 5.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.12e-22 | 73 |
nervous system | 1.38e-21 | 75 |
gray matter | 1.23e-18 | 34 |
brain grey matter | 9.86e-16 | 29 |
regional part of telencephalon | 9.86e-16 | 29 |
telencephalon | 9.86e-16 | 29 |
connective tissue | 3.64e-15 | 46 |
ectoderm-derived structure | 4.06e-14 | 95 |
ectoderm | 4.06e-14 | 95 |
presumptive ectoderm | 4.06e-14 | 95 |
cerebral cortex | 4.50e-13 | 21 |
cerebral hemisphere | 4.50e-13 | 21 |
pallium | 4.50e-13 | 21 |
regional part of nervous system | 6.55e-13 | 54 |
regional part of cerebral cortex | 4.79e-12 | 17 |
neural tube | 1.09e-10 | 52 |
neural rod | 1.09e-10 | 52 |
future spinal cord | 1.09e-10 | 52 |
neural keel | 1.09e-10 | 52 |
occipital lobe | 1.42e-10 | 10 |
visual cortex | 1.42e-10 | 10 |
neocortex | 1.42e-10 | 10 |
neurectoderm | 6.10e-10 | 64 |
neural plate | 6.10e-10 | 64 |
presumptive neural plate | 6.10e-10 | 64 |
regional part of forebrain | 1.74e-09 | 39 |
forebrain | 1.74e-09 | 39 |
future forebrain | 1.74e-09 | 39 |
anterior neural tube | 4.78e-09 | 40 |
autonomic nervous system | 8.36e-09 | 9 |
regional part of brain | 1.02e-08 | 46 |
brain | 2.37e-08 | 47 |
future brain | 2.37e-08 | 47 |
organ system subdivision | 4.40e-08 | 194 |
bone marrow | 1.82e-07 | 16 |
ecto-epithelium | 2.19e-07 | 73 |