FFCP PHASE1:Hg19::chr3:48514483..48514523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=51246 | |EntrezGene=51246 | ||
| Line 8: | Line 8: | ||
|UniProt=Q8N114 | |UniProt=Q8N114 | ||
|association_with_transcript=0bp_to_ENST00000494854,ENST00000497863,uc003ctm.1,uc003ctn.1,uc003ctt.2,uc003ctu.1_5end | |association_with_transcript=0bp_to_ENST00000494854,ENST00000497863,uc003ctm.1,uc003ctn.1,uc003ctt.2,uc003ctu.1_5end | ||
|cluster_id=chr3:48514483..48514523,- | |||
|description=CAGE_peak_1_at_SHISA5_5end | |description=CAGE_peak_1_at_SHISA5_5end | ||
|id=chr3:48514483..48514523,- | |id=chr3:48514483..48514523,- | ||
Latest revision as of 14:13, 18 September 2015
| Short description: | p1@SHISA5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SHISA5_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000494854, ENST00000497863, uc003ctm.1, uc003ctn.1, uc003ctt.2, uc003ctu.1_5end |
| EntrezGene: | SHISA5 |
| HGNC: | 30376 |
| UniProt: | Q8N114 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SHISA5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 1.69e-21 | 121 |
| embryonic cell | 1.87e-16 | 250 |
| meso-epithelial cell | 8.64e-14 | 45 |
| endothelial cell | 6.19e-13 | 36 |
| smooth muscle cell | 4.25e-12 | 43 |
| smooth muscle myoblast | 4.25e-12 | 43 |
| lining cell | 2.73e-11 | 58 |
| barrier cell | 2.73e-11 | 58 |
| vascular associated smooth muscle cell | 2.02e-10 | 32 |
| endothelial cell of vascular tree | 1.10e-09 | 24 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 2.06e-19 | 78 |
| vascular system | 2.06e-19 | 78 |
| vessel | 9.31e-18 | 68 |
| cardiovascular system | 1.12e-17 | 109 |
| circulatory system | 1.95e-16 | 112 |
| epithelial tube | 1.10e-15 | 117 |
| epithelial tube open at both ends | 6.14e-15 | 59 |
| blood vessel | 6.14e-15 | 59 |
| blood vasculature | 6.14e-15 | 59 |
| vascular cord | 6.14e-15 | 59 |
Showing 1 to 10 of 51 entries
