FFCP PHASE1:Hg19::chr21:47406517..47406541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1291 | |EntrezGene=1291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2211 | |HGNC=2211 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-481bp_to_ENST00000492851_5end | |association_with_transcript=-481bp_to_ENST00000492851_5end | ||
|cluster_id=chr21:47406517..47406541,+ | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_6_at_COL6A1_5end | |description=CAGE_peak_6_at_COL6A1_5end |
Latest revision as of 21:59, 18 September 2015
Short description: | p6@COL6A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL6A1_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -481bp_to_ENST00000492851_5end |
EntrezGene: | COL6A1 |
HGNC: | 2211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@COL6A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.11e-25 | 76 |
multi fate stem cell | 1.72e-20 | 427 |
somatic stem cell | 1.39e-19 | 433 |
muscle precursor cell | 1.39e-19 | 58 |
myoblast | 1.39e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-19 | 58 |
muscle cell | 4.03e-19 | 55 |
stem cell | 2.02e-18 | 441 |
electrically responsive cell | 6.14e-16 | 61 |
electrically active cell | 6.14e-16 | 61 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
somite | 5.82e-24 | 71 |
presomitic mesoderm | 5.82e-24 | 71 |
presumptive segmental plate | 5.82e-24 | 71 |
dermomyotome | 5.82e-24 | 71 |
trunk paraxial mesoderm | 5.82e-24 | 71 |
dense mesenchyme tissue | 7.06e-24 | 73 |
paraxial mesoderm | 2.19e-23 | 72 |
presumptive paraxial mesoderm | 2.19e-23 | 72 |
epithelial vesicle | 2.91e-20 | 78 |
multilaminar epithelium | 4.86e-19 | 83 |
Showing 1 to 10 of 40 entries