FFCP PHASE1:Mm9::chr13:49600221..49600249,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:49600221..49600249,+
|short_description=p1@Ecm2
|description=CAGE_peak_1_at_Ecm2_5end
|association_with_transcript=42bp_to_ENSMUST00000051504,NM_001012324...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=407800 | |EntrezGene=407800 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2855 | |||
|TSSclassifier=NA | |||
|UniProt=Q5FW85 | |UniProt=Q5FW85 | ||
|association_with_transcript=42bp_to_ENSMUST00000051504,NM_001012324,uc007qjl.1,uc011yzf.1_5end | |||
|cluster_id=chr13:49600221..49600249,+ | |||
|description=CAGE_peak_1_at_Ecm2_5end | |||
|id=chr13:49600221..49600249,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.84e-08!23;UBERON:0000468!9.08e-08!333;UBERON:0007100!8.12e-07!18;UBERON:0000948!8.12e-07!18;UBERON:0005498!8.12e-07!18;UBERON:0004140!8.12e-07!18;UBERON:0009881!8.12e-07!18;UBERON:0004141!8.12e-07!18;UBERON:0003084!8.12e-07!18;UBERON:0007005!8.12e-07!18;UBERON:0004139!8.12e-07!18;UBERON:0004291!8.12e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.50e-08,22;UBERON:0007100,4.17e-07,18;UBERON:0000948,4.17e-07,18;UBERON:0005498,4.17e-07,18;UBERON:0004140,4.17e-07,18;UBERON:0009881,4.17e-07,18;UBERON:0004141,4.17e-07,18;UBERON:0003084,4.17e-07,18;UBERON:0007005,4.17e-07,18;UBERON:0004139,4.17e-07,18;UBERON:0004291,4.17e-07,18;UBERON:0004535,8.04e-07,23;UBERON:0001009,8.04e-07,23 | |||
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| ||
|short_description=p1@Ecm2 | |||
}} | }} |
Latest revision as of 17:01, 1 October 2015
Short description: | p1@Ecm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ecm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2855 |
Association with transcript: | 42bp_to_ENSMUST00000051504, NM_001012324, uc007qjl.1, uc011yzf.1_5end |
EntrezGene: | Ecm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 2.50e-08 | 22 |
primary circulatory organ | 4.17e-07 | 18 |
heart | 4.17e-07 | 18 |
primitive heart tube | 4.17e-07 | 18 |
primary heart field | 4.17e-07 | 18 |
anterior lateral plate mesoderm | 4.17e-07 | 18 |
heart tube | 4.17e-07 | 18 |
heart primordium | 4.17e-07 | 18 |
cardiac mesoderm | 4.17e-07 | 18 |
cardiogenic plate | 4.17e-07 | 18 |
heart rudiment | 4.17e-07 | 18 |
cardiovascular system | 8.04e-07 | 23 |
circulatory system | 8.04e-07 | 23 |