FFCP PHASE1:Hg19::chr2:43452821..43452851,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43452821..43452851,+ | |||
|coexpression_cluster_id=C767 | |coexpression_cluster_id=C767 | ||
|description=CAGE_peak_at_chr2:43452821..43452851,+ | |description=CAGE_peak_at_chr2:43452821..43452851,+ |
Latest revision as of 10:16, 29 July 2015
Short description: | p@chr2:43452821..43452851, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43452821..43452851, + |
Coexpression cluster: | C767_CD4_CD8_Neutrophils_Natural_Mast_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:43452821..43452851+ |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.91e-11 | 6 |
granulocyte | 3.84e-10 | 8 |
hematopoietic stem cell | 1.18e-08 | 168 |
hematopoietic cell | 1.11e-07 | 177 |
leukocyte | 1.30e-07 | 136 |
hematopoietic oligopotent progenitor cell | 1.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-07 | 161 |
mature alpha-beta T cell | 2.62e-07 | 18 |
alpha-beta T cell | 2.62e-07 | 18 |
immature T cell | 2.62e-07 | 18 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
---|---|---|
articulation | 1.46e-10 | 8 |
skeletal joint | 1.46e-10 | 8 |
articular system | 1.46e-10 | 8 |
blood | 2.68e-09 | 15 |
haemolymphatic fluid | 2.68e-09 | 15 |
organism substance | 2.68e-09 | 15 |
intervertebral cartilage | 5.87e-09 | 5 |
symphysis | 5.87e-09 | 5 |
nonsynovial joint | 5.87e-09 | 5 |
fibrous joint | 5.87e-09 | 5 |
Showing 1 to 10 of 19 entries