FFCP PHASE1:Mm9::chr12:90692461..90692464,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:90692461..90692464,+
|short_description=p@chr12:90692461..90692464,+
|description=CAGE_peak_at_chr12:90692461..90692464,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=538 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:90692461..90692464,+ | |||
|description=CAGE_peak_at_chr12:90692461..90692464,+ | |||
|id=chr12:90692461..90692464,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.73e-15!63;UBERON:0002346!6.43e-14!71;UBERON:0003075!6.43e-14!71;UBERON:0007284!6.43e-14!71;UBERON:0003056!3.63e-13!49;UBERON:0001049!4.73e-13!52;UBERON:0005068!4.73e-13!52;UBERON:0006241!4.73e-13!52;UBERON:0007135!4.73e-13!52;UBERON:0000955!1.24e-11!50;UBERON:0006238!1.24e-11!50;UBERON:0002021!6.78e-11!10;UBERON:0000411!6.78e-11!10;UBERON:0001950!6.78e-11!10;UBERON:0002616!9.92e-11!49;UBERON:0001017!2.94e-10!73;UBERON:0005743!2.94e-10!73;UBERON:0000073!9.84e-10!75;UBERON:0001016!9.84e-10!75;UBERON:0003080!1.19e-09!40;UBERON:0004121!1.72e-09!102;UBERON:0000924!1.72e-09!102;UBERON:0006601!1.72e-09!102;UBERON:0002020!3.65e-09!34;UBERON:0002780!6.76e-09!39;UBERON:0001890!6.76e-09!39;UBERON:0006240!6.76e-09!39;UBERON:0007811!8.67e-09!86;UBERON:0002791!9.09e-09!29;UBERON:0003528!9.09e-09!29;UBERON:0001893!9.09e-09!29;UBERON:0002619!6.04e-08!17;UBERON:0000153!3.07e-07!94;UBERON:0000956!3.85e-07!21;UBERON:0001869!3.85e-07!21;UBERON:0000203!3.85e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.29e-10,10;UBERON:0000411,1.29e-10,10;UBERON:0001950,1.29e-10,10;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0002346,2.39e-08,64;UBERON:0003075,2.39e-08,64;UBERON:0007284,2.39e-08,64;UBERON:0003056,4.17e-08,49;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0010371,2.65e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0.52091337055676,0,1.12552522006336,0,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.449371918214468,0.915001205637253,0.628271760564322,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0,0,0.150704817835715,0.884474488967262,0.512454881139399,1.03071897015702,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,0,0,0.341467211508268,0.486213434136588,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0.52091337055676,0,1.12552522006336,0,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.449371918214468,0.915001205637253,0.628271760564322,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0,0,0.150704817835715,0.884474488967262,0.512454881139399,1.03071897015702,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,0,0,0.341467211508268,0.486213434136588,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr12:90692461..90692464,+ | |||
}} | }} |
Latest revision as of 11:20, 5 August 2015
Short description: | p@chr12:90692461..90692464, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:90692461..90692464, + |
Coexpression cluster: | MCL_coexpression_mm9:538 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.29e-10 | 10 |
visual cortex | 1.29e-10 | 10 |
neocortex | 1.29e-10 | 10 |
brain | 1.77e-08 | 47 |
future brain | 1.77e-08 | 47 |
neurectoderm | 2.39e-08 | 64 |
neural plate | 2.39e-08 | 64 |
presumptive neural plate | 2.39e-08 | 64 |
pre-chordal neural plate | 4.17e-08 | 49 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
ecto-epithelium | 2.65e-07 | 73 |