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FFCP PHASE1:Mm9::chr12:88019635..88019746,+: Difference between revisions

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(Created page with "{{FFCP |id=chr12:88019635..88019746,+ |short_description=p1@Vash1 |description=CAGE_peak_1_at_Vash1_5end |association_with_transcript=0bp_to_ENSMUST00000021681,NM_177354,u...")
 
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{{FFCP
{{FFCP
|id=chr12:88019635..88019746,+
|DHSsupport=NA
|short_description=p1@Vash1
|DPIdataset=NA
|description=CAGE_peak_1_at_Vash1_5end
|association_with_transcript=0bp_to_ENSMUST00000021681,NM_177354,uc007ohx.2_5end
|EntrezGene=238328
|EntrezGene=238328
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8C1W1,A0PCF8
|UniProt=Q8C1W1,A0PCF8
|association_with_transcript=0bp_to_ENSMUST00000021681,NM_177354,uc007ohx.2_5end
|cluster_id=chr12:88019635..88019746,+
|description=CAGE_peak_1_at_Vash1_5end
|id=chr12:88019635..88019746,+
|ontology_enrichment_celltype=CL:0000540!1.34e-17!33;CL:0000047!1.34e-17!33;CL:0000031!1.34e-17!33;CL:0000404!1.34e-17!33;CL:0002319!9.60e-16!43;CL:0000221!1.53e-15!44;CL:0000133!1.53e-15!44;CL:0000117!2.98e-12!23;CL:0000337!2.98e-12!23;CL:0000393!5.01e-12!39;CL:0000211!5.01e-12!39;CL:0000055!6.73e-11!50;CL:0000107!5.79e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-17,33;CL:0000047,1.02e-17,33;CL:0000031,1.02e-17,33;CL:0000404,1.02e-17,33;CL:0002319,7.59e-16,43;CL:0000221,1.21e-15,44;CL:0000133,1.21e-15,44;CL:0000117,2.50e-12,23;CL:0000337,2.50e-12,23;CL:0000393,6.40e-12,39;CL:0000211,6.40e-12,39;CL:0000107,5.29e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-23,73;UBERON:0001016,2.03e-23,75;UBERON:0004121,1.11e-22,95;UBERON:0000924,1.11e-22,95;UBERON:0006601,1.11e-22,95;UBERON:0002346,5.72e-19,64;UBERON:0003075,5.72e-19,64;UBERON:0007284,5.72e-19,64;UBERON:0010314,7.12e-19,92;UBERON:0010371,3.07e-16,73;UBERON:0000073,3.07e-14,54;UBERON:0001049,5.54e-14,52;UBERON:0005068,5.54e-14,52;UBERON:0006241,5.54e-14,52;UBERON:0007135,5.54e-14,52;UBERON:0003056,6.48e-13,49;UBERON:0002020,5.80e-12,34;UBERON:0000955,1.85e-11,47;UBERON:0006238,1.85e-11,47;UBERON:0002616,5.47e-11,46;UBERON:0002780,6.22e-10,39;UBERON:0001890,6.22e-10,39;UBERON:0006240,6.22e-10,39;UBERON:0003080,6.92e-10,40;UBERON:0003528,2.25e-09,29;UBERON:0002791,2.25e-09,29;UBERON:0001893,2.25e-09,29;UBERON:0000025,5.59e-09,114;UBERON:0000922,2.75e-08,320;UBERON:0004111,2.69e-07,122;UBERON:0002410,5.29e-07,9;UBERON:0000956,8.37e-07,21;UBERON:0001869,8.37e-07,21;UBERON:0000203,8.37e-07,21
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|phase1_expression=8.96833543786846,0,0.454999239389536,0,0,1.34303417529512,0.700837921786577,0,0,0.234064526321993,0,0.159544317990673,0,0.0874204024189974,0.666219523631325,0.202475267389826,2.09868563438444,0,0,0,7.05859308253879,3.57447424323187,2.61199789138935,1.11994695955385,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,6.25913075478431,13.9536100083486,2.41654801007919,3.30530828426282,4.61955191363696,20.125359011096,0,0,0.336093799142464,0.771778308107841,5.73066879877513,2.57836046138721,64.1343180924925,58.1890077199236,63.3831403506179,1.69422266034566,0,5.39939830368839,2.96659908770092,4.9733608046227,30.8588113833957,49.9483796918021,95.4981329361079,87.3488421006039,88.7571336902832,51.1315262082808,42.1858913217582,76.0667863124865,65.6541476474919,78.1335968618518,19.82085857989,25.2820929408672,16.5895055916743,82.6927024068315,73.6475530999398,67.197824801822,25.684835908127,18.5711661310454,14.9742282821274,44.4889164065238,40.0064423045479,53.4966409518613,6.51245262665383,19.1196047070167,5.50742528533188,3.44169550792555,0.679971333707751,0,1.94932925234301,0.448026887097336,3.37066608316204,0.340860645156116,0.779358013808606,0.70667914902068,10.140726223921,0,0,0,0.432982082022428,2.02687892380079,1.51657333504435,2.39786147410026,0.517875767294343,1.03909497345377,13.3583701609925,15.2232739156071,10.1470818792666,8.59119051149949,10.4653949350777,5.27799683584637,0.988779870937496,1.15679485535929,6.19227386364912,25.3973954417432,11.2629174414801,8.727754556434,0,24.3008061519584,37.281513812795,1.27728527604296,0.599075622529601,0.599902730993408,0.381210681219194,13.6309481858389,10.0650132620098,58.429273732482,18.5992022605736,24.5486839037117,14.1295870300501,18.9822277789276,17.8218886738054,5.59831367745419,0.758168275301024,4.41927897361595,25.7638477066153,32.1862946206862,42.4946626340624,37.3747948232573,53.2725788354897,67.1315894292613,79.45906242665,13.9699820199068,12.5029435901048,17.775971535775,17.5951124163949,20.1660073833369,15.2925987074079,21.5916343243743,14.8163138213719,9.55364480728767,0,0.257347907114715,0.284163499395593,14.0845525324141,15.2441938987713,14.2249028554202,25.0949419720323,19.6764231747404,18.8205877722601,18.835249524783,23.0715125203672,16.4639132737709,22.5446994381468,25.2817894681807,26.428431911949,15.3509986796599,19.7595103761946,14.8969124824013,19.9775451135921,65.5502380856042,0.330418782983798,0.528901133327089,13.4371597837197,13.7019636397659,10.9537342123779,8.47070803418039,8.67274370994994,7.60902504450237,4.74529061544512,5.10566759644434,5.7807098024062,7.36138946552258,4.28920991662064,3.59527763461689,3.02593269824572,2.19055400579804,12.7077493638565,8.56863844572966,14.6520056375005,12.4227309985642,9.69762435838129,9.60860732497364,8.78987866027176,2.65698266363284,2.19798218977925,1.85095745882701,0.889357881261447,5.83957870006329,5.30709286805648,3.14806957338795,4.46292267054706,3.13530307678142,5.0925170356284,6.04161888646702,7.45822043165163,5.49122826376163,37.3797336971122,6.69853705803306,7.48890415474945,5.05157755894223,2.87035861635059,4.3419916922703,6.83586803616437,14.2118558827864,17.2742875028547,16.4652733201932,17.3670783733492,12.730475565578,22.6141458841713,29.2700471786698,27.270879930371,25.0255099303116,29.3396774329776,12.2897486036803,15.0235934223329,14.6095549167327,0,0,1.96705709207614,4.96686143348518,20.2293743384618,25.9037827368769,0.163934945376675,11.3611917241968,44.4866589376922,40.2151906625538,64.8424427175725,89.8522680301596,91.570255047864,137.858270494161,63.9600908646333,68.0956148933357,71.9423755862673,39.2012006034605,7.09700426041343,18.8749539887291,20.6866438379042,4.94910368917606,1.32745138339963,8.01176099311439,6.95344181018927,4.71512699389745,8.56375489354241,7.68587869859819,4.39328098385976,9.81541069589265,7.84294232446387,3.47640433729398,7.37930260024991,2.06271086496374,3.40439605753788,27.0091641046965,26.1304541241164,24.6487590286331,12.4138163549592,14.4478742257677,14.3157647923845,13.700922710157,3.52007562095566,1.48282449604674,0.882113592219848,2.4732937941222,11.3025098687134,9.77069383836125,6.08798954415996,3.77524069413641,4.66369338607761,29.482623019671,0.854354403989263,10.3193433981611,4.44466865687308,1.69531611304222,0.956859594047176,1.37266903923914,3.56954702987096,1.39951452323658,3.04039942369732,1.90934123603023,14.7096237015228,13.419084830372,8.5324219249223,6.690825472463,8.07941485860857,7.28267470478032,8.76126630688561,3.92633912976044,2.20345454596048,1.24267862617385,3.94585057078933,9.71857549285862,10.7548018797113,14.9727415024917,17.6948958164492,19.767866682421,15.256441023948,8.46328501485676,5.13810787685983,0.724752362478018,2.59227005632079,1.26404448251271,13.582589424441,7.80603274452687,6.36612032591196,4.65469408735452,4.96703386953162,2.28371354087941,2.80610101631697,2.82706059854813,2.59103142626999,1.71404514732629,1.16949456887703,1.44317762460494,1.05189211963412,7.70883304291719,0,0.538283139656854,0.167884616364078,1.54551675225752,5.63047426353546,3.11357761254351,1.71494703263253,0,32.7556068717899,34.5243927380383,32.6550442660456,37.2921405685802,15.7568979547248,18.8848474347425,17.550585006027,14.8605997063993,16.3131267234314,22.2636934053283,22.937003816103,29.1288157582753,23.5612375940705,18.2330037801221,23.476674214334,21.1420034717516,20.224452229947,22.0457511245617,23.1061830906107,17.6888048234658,17.7435509923168,22.8237873077152,20.4138486284344,24.0734573042308,25.099299933603,24.2909782554368,26.0739733375925,20.6412865896164,23.0768104449852,17.3694725758589,20.5721551431249,14.5530161050657,19.0748951957857,16.4241450794531,19.1042042243121,20.8998081492441,21.0367168803688,17.0995312434598,19.1483800522665,15.1508413347589,21.117033226103,25.4141564528954,21.6892452879935,19.0572314658738,21.0268205969444,45.9651463405821,24.5628188867679,24.495300161506,18.7462565427467,19.1914534633978,18.5494268496337
|short_description=p1@Vash1
}}
}}

Latest revision as of 23:13, 26 September 2015

Short description:p1@Vash1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vash1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000021681, NM_177354, uc007ohx.2_5end
EntrezGene:Vash1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vash1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C364.13
Mouse Granule cells, donor2.CNhs12357.11731-123E358.19
Mouse Granule cells, donor3.CNhs12108.11636-122C763.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C830.86
Mouse Microglia, donor2.CNhs12634.11736-123E849.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D595.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F587.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D988.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D542.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D276.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F265.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D678.13
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D482.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F473.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D867.20
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.01
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E153.50
Mouse Schwann, donor1.CNhs12507.11728-123D96.51
Mouse Schwann, donor2.CNhs12573.11746-123F919.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C110.47
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F525.40
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I237.28
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F158.43
cortex, adult.CNhs10473.12-14D518.60
cortex, neonate N30.CNhs11107.1392-42F224.55
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C625.76
eyeball, embryo E14.CNhs10521.399-16E232.19
eyeball, embryo E15.CNhs10593.426-16C942.49
eyeball, embryo E17.CNhs11023.1261-18D437.37
eyeball, neonate N00.CNhs11207.633-15C653.27
eyeball, neonate N01.CNhs11140.1532-43E767.13
eyeball, neonate N02.CNhs11205.1551-44G879.46
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E212.50
forelimb, embryo E12.CNhs10600.359-14H217.78
forelimb, embryo E13.CNhs10589.384-1E217.60
forelimb, embryo E14.CNhs10577.413-26A820.17
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C421.59
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I69.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F515.24
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D425.09
heart, embryo E15.CNhs11017.431-16C819.68
heart, embryo E16.CNhs11021.457-17C618.82
heart, embryo E17.CNhs11025.479-18E518.84
heart, embryo E18.CNhs11030.1283-20G323.07
heart, neonate N00.CNhs11213.639-21E316.46
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G125.28
heart, neonate N16.CNhs11209.782-15G126.43
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D214.90
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G165.55
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D810.95
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F88.57
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I212.42
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G79.61
kidney, neonate N10.CNhs11206.758-6D58.79
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B16.84
lung, embryo E12.CNhs10522.354-16G214.21
lung, embryo E14.CNhs10604.404-26F817.27
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A612.73
lung, embryo E18.CNhs10583.1287-20I622.61
lung, neonate N00.CNhs11224.640-42C629.27
lung, neonate N06.CNhs11212.683-20E527.27
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E629.34
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C715.02
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C220.23
medulla oblongata, neonate N30.CNhs11200.1396-42A325.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E144.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E240.22
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E364.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D789.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D891.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9137.86
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D463.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D568.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D671.94
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H718.87
ovary, neonate N00.CNhs11217.1299-22I420.69
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C726.13
pituitary gland, embryo E14.CNhs11037.398-44A524.65
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F514.32
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G411.30
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C929.48
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C110.32
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E314.71
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D48.53
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C68.08
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A98.76
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I517.69
testis, embryo E18.CNhs11027.503-18G519.77
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C56.37
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I822.94
whole body, embryo E12.CNhs10587.857-27C929.13
whole body, embryo E13.CNhs10512.372-23H223.56
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B123.48
whole body, embryo E16.CNhs10514.453-14F221.14
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.69
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.06
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I545.97
whole body, embryo E18.CNhs10516.493-3B324.56
whole body, neonate N00.CNhs10525.657-19C224.50
whole body, neonate N01.CNhs10576.659-23C618.75
whole body, neonate N06.CNhs10515.692-21D119.19
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.61e-2373
nervous system2.03e-2375
ectoderm-derived structure1.11e-2295
ectoderm1.11e-2295
presumptive ectoderm1.11e-2295
neurectoderm5.72e-1964
neural plate5.72e-1964
presumptive neural plate5.72e-1964
structure with developmental contribution from neural crest7.12e-1992
ecto-epithelium3.07e-1673
regional part of nervous system3.07e-1454
neural tube5.54e-1452
neural rod5.54e-1452
future spinal cord5.54e-1452
neural keel5.54e-1452
pre-chordal neural plate6.48e-1349
gray matter5.80e-1234
brain1.85e-1147
future brain1.85e-1147
regional part of brain5.47e-1146
regional part of forebrain6.22e-1039
forebrain6.22e-1039
future forebrain6.22e-1039
anterior neural tube6.92e-1040
brain grey matter2.25e-0929
regional part of telencephalon2.25e-0929
telencephalon2.25e-0929
tube5.59e-09114
embryo2.75e-08320
anatomical conduit2.69e-07122
autonomic nervous system5.29e-079
cerebral cortex8.37e-0721
cerebral hemisphere8.37e-0721
pallium8.37e-0721
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