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FFCP PHASE1:Mm9::chr12:82434116..82434207,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:82434116..82434207,-
|DHSsupport=NA
|short_description=p1@Slc8a3
|DPIdataset=NA
|description=CAGE_peak_1_at_Slc8a3_5end
|association_with_transcript=0bp_to_ENSMUST00000064594,ENSMUST00000085238,NM_001167920,NM_080440,uc007obv.2,uc007obw.2,uc007obx.1_5end
|EntrezGene=110893
|EntrezGene=110893
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=E9PX50,Q7TS90,Q3UTP5,Q8BXN1,Q8VHJ8
|UniProt=E9PX50,Q7TS90,Q3UTP5,Q8BXN1,Q8VHJ8
|association_with_transcript=0bp_to_ENSMUST00000064594,ENSMUST00000085238,NM_001167920,NM_080440,uc007obv.2,uc007obw.2,uc007obx.1_5end
|cluster_id=chr12:82434116..82434207,-
|description=CAGE_peak_1_at_Slc8a3_5end
|id=chr12:82434116..82434207,-
|ontology_enrichment_celltype=CL:0000117!2.13e-14!23;CL:0000337!2.13e-14!23;CL:0000540!3.90e-11!33;CL:0000047!3.90e-11!33;CL:0000031!3.90e-11!33;CL:0000404!3.90e-11!33;CL:0002319!1.33e-08!43;CL:0000393!1.41e-08!39;CL:0000211!1.41e-08!39;CL:0000221!1.65e-08!44;CL:0000133!1.65e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-18,23;CL:0000337,1.74e-18,23;CL:0000540,5.82e-11,33;CL:0000047,5.82e-11,33;CL:0000031,5.82e-11,33;CL:0000404,5.82e-11,33;CL:0000393,6.18e-08,39;CL:0000211,6.18e-08,39;CL:0002319,1.55e-07,43;CL:0000221,3.59e-07,44;CL:0000133,3.59e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.57e-23!102;UBERON:0000924!4.57e-23!102;UBERON:0006601!4.57e-23!102;UBERON:0002346!4.85e-21!71;UBERON:0003075!4.85e-21!71;UBERON:0007284!4.85e-21!71;UBERON:0000033!6.80e-21!63;UBERON:0001017!7.95e-20!73;UBERON:0005743!7.95e-20!73;UBERON:0000073!3.27e-19!75;UBERON:0001016!3.27e-19!75;UBERON:0001049!9.39e-18!52;UBERON:0005068!9.39e-18!52;UBERON:0006241!9.39e-18!52;UBERON:0007135!9.39e-18!52;UBERON:0002020!2.31e-16!34;UBERON:0000955!4.14e-16!50;UBERON:0006238!4.14e-16!50;UBERON:0003056!1.14e-15!49;UBERON:0002616!1.86e-15!49;UBERON:0002791!9.75e-13!29;UBERON:0003528!9.75e-13!29;UBERON:0001893!9.75e-13!29;UBERON:0003080!4.28e-12!40;UBERON:0002780!1.89e-11!39;UBERON:0001890!1.89e-11!39;UBERON:0006240!1.89e-11!39;UBERON:0007811!5.10e-09!86;UBERON:0000153!1.46e-08!94;UBERON:0000956!2.76e-08!21;UBERON:0001869!2.76e-08!21;UBERON:0000203!2.76e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.63e-23,95;UBERON:0000924,2.63e-23,95;UBERON:0006601,2.63e-23,95;UBERON:0002346,2.81e-23,64;UBERON:0003075,2.81e-23,64;UBERON:0007284,2.81e-23,64;UBERON:0000073,8.70e-23,54;UBERON:0010371,4.27e-22,73;UBERON:0001049,3.74e-21,52;UBERON:0005068,3.74e-21,52;UBERON:0006241,3.74e-21,52;UBERON:0007135,3.74e-21,52;UBERON:0002020,1.28e-20,34;UBERON:0001017,1.54e-20,73;UBERON:0001016,1.84e-19,75;UBERON:0003056,7.45e-18,49;UBERON:0000955,1.17e-16,47;UBERON:0006238,1.17e-16,47;UBERON:0003528,7.30e-16,29;UBERON:0002791,7.30e-16,29;UBERON:0001893,7.30e-16,29;UBERON:0002616,7.47e-16,46;UBERON:0003080,5.77e-14,40;UBERON:0002780,3.81e-13,39;UBERON:0001890,3.81e-13,39;UBERON:0006240,3.81e-13,39;UBERON:0010314,3.16e-12,92;UBERON:0000956,4.88e-10,21;UBERON:0001869,4.88e-10,21;UBERON:0000203,4.88e-10,21;UBERON:0003076,3.41e-08,12;UBERON:0003057,3.41e-08,12;UBERON:0002619,1.44e-07,17;UBERON:0002420,2.41e-07,8;UBERON:0007245,2.41e-07,8;UBERON:0010009,2.41e-07,8;UBERON:0010011,2.41e-07,8;UBERON:0000454,2.41e-07,8;UBERON:0002240,3.52e-07,6;UBERON:0005174,3.52e-07,6;UBERON:0001137,3.52e-07,6;UBERON:0002021,9.71e-07,10;UBERON:0000411,9.71e-07,10;UBERON:0001950,9.71e-07,10
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,7.89034197352431,11.6378015439847,14.5781222806421,0,0,0,0,0,1.79760066311043,1.15265491596466,7.67303131082735,9.85543349821342,10.3059231062177,32.5642122220336,31.8050698970323,4.28717797252339,2.58782771749238,8.27296907949019,16.5173821499083,15.9609172606485,12.4421291937557,9.10015385338338,7.86793734980723,7.29278718779464,17.0301629390842,11.8180148106653,11.4598685832608,30.9360014747351,23.9184423742493,16.7759501242771,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,5.89866564553358,0,0,0,0.281686839553361,0,0,0,0,0,0,1.37020655662872,0,0.29688427812965,0.173485326766136,0.913396434936424,0.691846491768175,0.753613202763113,0.352766121407114,0.376999773989026,0,0.144599356919912,3.5384422077995,15.6913844448987,11.4837589599405,7.75800405016355,1.86391761218122,13.7606974595427,18.0124167859571,0.255457055208591,0,0,0,19.3229924832221,17.8425235099264,11.6858547464964,7.82209440865244,4.85859368927628,11.6361304953354,14.4394724130304,0.101839363850316,3.73220911830279,0,5.47148825304832,0.650602214813519,1.83921683546778,2.34080768746954,5.57607825992146,9.66118287948856,9.86475646193343,11.056803498048,16.039608985819,0.215567992932842,0.189106080167819,0,0.43839146485515,0.278047249225598,2.43776516565517,1.02891068203972,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,5.88811855979556,5.76265829323993,0.660837565967596,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.889512175379481,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.974820435595601,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0,0.339490171550376,0.938760993154008,0.502518772325447,0.476087281772027,1.56106918286239,2.04925687338048,1.55025282754142,1.91345722388985,2.94953966488328,1.38147985492716,0.578596234326046,0,0,0,0,17.6605648986571,16.0580010631318,0,29.791569410116,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,16.708708453934,0.283880170416537,0.712262414669021,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,1.42598951353889,0.316036757935816,0,0,1.02131881726136,0,0.388076051348264,0,0.177340233642274,0.356737635204141,0.164549020602121,1.522324745573,0,0,0,1.31909002353184,1.29171541356724,1.38719727334758,0.716234064018819,1.80554989719567,2.04036585640896,17.0591277849669,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.404593039154462,0.661227645802687,0.523511883968059,0.648074866458964,1.24267862617385,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0,2.59227005632079,0,0,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0,0,0,0,0,0,0,31.062062555284,0,0,0,0,0,0,0.643105137237198,0,5.0827665835536,5.9842280745933,10.8850147553485,9.96748457593388,3.42541259885321,7.55393897389701,9.45031500324528,5.40385443869065,7.70342095273148,1.55328093525546,0.103787347584177,0.798049746802062,1.02440163452481,1.94485373654635,1.04806581313991,2.02227859295016,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,2.78827229879264,4.14977951049368,2.62196220915671,3.64943368707755,2.69946704091382,2.85776214769844,4.86714168968393,2.89363830695558,2.06042950401653,1.61918812147837,3.08582327146874,2.12970967391205,3.33810665926249,2.90692833264657,2.54095327121393,4.73841804193388,3.65855945745545,2.89376682581627,3.93831930152999,3.36685362994643,3.55905054372522,2.06859412988683,1.63692417267876,2.47898945897546,1.35034627686799,4.24677982494508,5.14649538579898,4.72716318906256,8.7992632751668,10.5883881177367,12.7527309591232
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,7.89034197352431,11.6378015439847,14.5781222806421,0,0,0,0,0,1.79760066311043,1.15265491596466,7.67303131082735,9.85543349821342,10.3059231062177,32.5642122220336,31.8050698970323,4.28717797252339,2.58782771749238,8.27296907949019,16.5173821499083,15.9609172606485,12.4421291937557,9.10015385338338,7.86793734980723,7.29278718779464,17.0301629390842,11.8180148106653,11.4598685832608,30.9360014747351,23.9184423742493,16.7759501242771,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,5.89866564553358,0,0,0,0.281686839553361,0,0,0,0,0,0,1.37020655662872,0,0.29688427812965,0.173485326766136,0.913396434936424,0.691846491768175,0.753613202763113,0.352766121407114,0.376999773989026,0,0.144599356919912,3.5384422077995,15.6913844448987,11.4837589599405,7.75800405016355,1.86391761218122,13.7606974595427,18.0124167859571,0.255457055208591,0,0,0,19.3229924832221,17.8425235099264,11.6858547464964,7.82209440865244,4.85859368927628,11.6361304953354,14.4394724130304,0.101839363850316,3.73220911830279,0,5.47148825304832,0.650602214813519,1.83921683546778,2.34080768746954,5.57607825992146,9.66118287948856,9.86475646193343,11.056803498048,16.039608985819,0.215567992932842,0.189106080167819,0,0.43839146485515,0.278047249225598,2.43776516565517,1.02891068203972,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,5.88811855979556,5.76265829323993,0.660837565967596,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.889512175379481,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.974820435595601,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0,0.339490171550376,0.938760993154008,0.502518772325447,0.476087281772027,1.56106918286239,2.04925687338048,1.55025282754142,1.91345722388985,2.94953966488328,1.38147985492716,0.578596234326046,0,0,0,0,17.6605648986571,16.0580010631318,0,29.791569410116,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,16.708708453934,0.283880170416537,0.712262414669021,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,1.42598951353889,0.316036757935816,0,0,1.02131881726136,0,0.388076051348264,0,0.177340233642274,0.356737635204141,0.164549020602121,1.522324745573,0,0,0,1.31909002353184,1.29171541356724,1.38719727334758,0.716234064018819,1.80554989719567,2.04036585640896,17.0591277849669,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.404593039154462,0.661227645802687,0.523511883968059,0.648074866458964,1.24267862617385,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0,2.59227005632079,0,0,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0,0,0,0,0,0,0,31.062062555284,0,0,0,0,0,0,0.643105137237198,0,5.0827665835536,5.9842280745933,10.8850147553485,9.96748457593388,3.42541259885321,7.55393897389701,9.45031500324528,5.40385443869065,7.70342095273148,1.55328093525546,0.103787347584177,0.798049746802062,1.02440163452481,1.94485373654635,1.04806581313991,2.02227859295016,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,2.78827229879264,4.14977951049368,2.62196220915671,3.64943368707755,2.69946704091382,2.85776214769844,4.86714168968393,2.89363830695558,2.06042950401653,1.61918812147837,3.08582327146874,2.12970967391205,3.33810665926249,2.90692833264657,2.54095327121393,4.73841804193388,3.65855945745545,2.89376682581627,3.93831930152999,3.36685362994643,3.55905054372522,2.06859412988683,1.63692417267876,2.47898945897546,1.35034627686799,4.24677982494508,5.14649538579898,4.72716318906256,8.7992632751668,10.5883881177367,12.7527309591232
|short_description=p1@Slc8a3
}}
}}

Latest revision as of 21:19, 26 September 2015

Short description:p1@Slc8a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc8a3_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 0bp_to_ENSMUST00000064594, ENSMUST00000085238, NM_001167920, NM_080440, uc007obv.2, uc007obw.2, uc007obx.1_5end
EntrezGene:Slc8a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc8a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A611.48
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I218.01
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.32
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F111.69
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C69.66
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G811.06
eyeball, neonate N16.CNhs11188.777-19A216.04
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B431.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.74e-1823
neuroblast (sensu Vertebrata)1.74e-1823
neuron5.82e-1133
neuronal stem cell5.82e-1133
neuroblast5.82e-1133
electrically signaling cell5.82e-1133
electrically responsive cell6.18e-0839
electrically active cell6.18e-0839
neural cell1.55e-0743
ectodermal cell3.59e-0744
neurectodermal cell3.59e-0744

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.63e-2395
ectoderm2.63e-2395
presumptive ectoderm2.63e-2395
neurectoderm2.81e-2364
neural plate2.81e-2364
presumptive neural plate2.81e-2364
regional part of nervous system8.70e-2354
ecto-epithelium4.27e-2273
neural tube3.74e-2152
neural rod3.74e-2152
future spinal cord3.74e-2152
neural keel3.74e-2152
gray matter1.28e-2034
central nervous system1.54e-2073
nervous system1.84e-1975
pre-chordal neural plate7.45e-1849
brain1.17e-1647
future brain1.17e-1647
brain grey matter7.30e-1629
regional part of telencephalon7.30e-1629
telencephalon7.30e-1629
regional part of brain7.47e-1646
anterior neural tube5.77e-1440
regional part of forebrain3.81e-1339
forebrain3.81e-1339
future forebrain3.81e-1339
structure with developmental contribution from neural crest3.16e-1292
cerebral cortex4.88e-1021
cerebral hemisphere4.88e-1021
pallium4.88e-1021
posterior neural tube3.41e-0812
chordal neural plate3.41e-0812
regional part of cerebral cortex1.44e-0717
basal ganglion2.41e-078
nuclear complex of neuraxis2.41e-078
aggregate regional part of brain2.41e-078
collection of basal ganglia2.41e-078
cerebral subcortex2.41e-078
spinal cord3.52e-076
dorsal region element3.52e-076
dorsum3.52e-076
occipital lobe9.71e-0710
visual cortex9.71e-0710
neocortex9.71e-0710
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