Personal tools

FFCP PHASE1:Mm9::chr12:80309891..80309910,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr12:80309891..80309910,+ |short_description=p1@Rdh12 |description=CAGE_peak_1_at_Rdh12_5end |association_with_transcript=0bp_to_ENSMUST00000021548,NM_030017,u...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:80309891..80309910,+
|DHSsupport=NA
|short_description=p1@Rdh12
|DPIdataset=NA
|description=CAGE_peak_1_at_Rdh12_5end
|association_with_transcript=0bp_to_ENSMUST00000021548,NM_030017,uc007oab.1,uc007oac.1,uc011yog.1_5end
|EntrezGene=77974
|EntrezGene=77974
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q8BYK4
|UniProt=Q8BYK4
|association_with_transcript=0bp_to_ENSMUST00000021548,NM_030017,uc007oab.1,uc007oac.1,uc011yog.1_5end
|cluster_id=chr12:80309891..80309910,+
|description=CAGE_peak_1_at_Rdh12_5end
|id=chr12:80309891..80309910,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=20.0186058880992,0,0.454999239389536,0,0,0,0.233612640595526,5.16493293766305,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,2.39681021903688,4.02133851127388,2.6648780945253,3.64455481301687,2.09868563438444,14.8267217718372,13.9856722277854,19.9463136345074,1.7008658030214,0.397163804803541,0,2.3998863419011,1.60586496747019,0,0,0.215471232685889,0.570070258369122,0.504060259519861,1.33038306393183,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,380.863783970586,228.14992060095,198.41549896607,432.938375190826,406.412063550275,232.073948748891,1.1330713617802,0.405507724878058,0.734187008646726,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.39986421625363,0,18.7916518784665,2.17608642603403,8.06625117941913,0.771778308107841,0.573066879877513,1.54701627683233,0.202316460859598,1.05798195854407,0,0.677689064138264,4.4464739805557,0,0,2.1314403448383,0.898800331555214,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.489963196859816,0.287536413054709,0,0,0.766124028511126,0.153606533256243,0.263772575460388,0.365950574409639,0,1.3959149950069,0,1.06958773443767,0,0.284743361598206,0,0.151452386666368,0.226714680320357,1.44932244350839,0,0,0,0,0,3.7919993435573,0,0,0,11.2674735821344,1.28326477414318,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,2.16949371466214,12.9468941823586,0.148442139064825,0.173485326766136,1.52232739156071,0.230615497256059,0.301445281105245,0.823120949949934,0.251333182659351,4.94389935468748,1.01219549843938,15.9229899350977,0.161766849947409,3.75430581382669,2.90925151881133,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,1.55759661857696,3.59941638596045,1.52484272487678,1.19832511523858,1.83000241127451,0.125654352112864,0.695297280769106,0.511430914660661,0.83115217823824,1.1356888414743,1.42575109390443,9.33052279575698,10.108910337347,87.5438120487732,0.650602214813519,0.459804208866946,2.88099407688559,6.17889753126432,0.95251098811859,2.8185018462667,4.96619140166563,287.936851632524,0.862271971731369,1.32374256117473,2.11141348996739,4.82230611340665,28.0827721717854,55.3720944770245,67.2907586053975,0.59710280045548,2.1066395619397,3.86021860672073,5.39910648851626,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,0.514523061896422,0,0.528901133327089,1.06644125267617,1.39342003116263,0.902072229254653,0.80673409849337,0.444756087689741,0,0.474529061544512,0,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,1.01825663922657,2.71533482034676,5.19005067188357,3.92066530170395,5.75679577120448,3.45397201251025,1.23397163921801,0.592905254174298,0,0,0.449724224769707,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,1.29708181420028,1.09824565275233,0,0.744281895337007,1.24815069245824,0,0.179397413521912,0.482443521363367,1.47802552133284,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,1.50755631697634,0.714130922658041,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,7.20998584749247,0.518054945597687,2.16973587872267,0,0.54390568381871,0.983528546038072,0.551873492609465,1.28440471990234,1.05490517932983,2.13115428989678,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,1.28528526568723,1.70328102249922,1.42452482933804,0.977321756121456,0.494910368917606,0,0.728341908464944,0,0.377210159511796,1.18120757152309,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,6.12791290356818,1.8006109403131,2.58717367565509,1.92903331528433,2.6601035046341,1.78368817602071,1.48094118541909,2.43571959291679,3.52007562095566,4.66030555900404,0.661585194164886,33.8016818530034,49.569578995643,39.8065304525829,49.897639793311,47.9291427255579,0.291480836629851,2.03967832211561,5.29699730473343,3.92135049130123,8.51894825900674,3.01389531207506,3.14396723758358,1.60144721244566,5.94924504978494,7.83728133012485,4.97519905695926,42.005507192665,0.949007980743406,5.28630614529807,26.1372924788759,69.8354908688326,65.5087691238533,63.2513784544809,38.8471241909079,59.4185988303747,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.972255941720238,0.774958940866387,0.844780627453891,0.821500670520278,0.2604087696879,0.314578033277133,0,0,2.8441000856536,1.82452693761148,1.54066435747241,1.16928740680016,1.9692936523423,2.98022032171897,1.44234539423963,1.9199638532695,2.01932899896295,2.66723823292499,2.11734988787365,2.72882066071307,2.21287235772758,2.33753804363138,69.1527670026395,0.221985953374065,0.0897138566094757,0,6.76163579112667,128.56249568406,1.64836461840539,91.106561108603,7.52358156053045,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0.755393897389701,0,1.80128481289688,0.906284817968409,1.03552062350364,0.31136204275253,1.19707462020309,1.36586884603307,13.3708694387562,1.04806581313991,1.83843508450014,3.11145418922261,2.88449080134452,5.45562656306086,4.54854981174835,3.8021894983536,4.33840585187975,4.58843386602424,3.3293079250532,3.21638626151434,4.28664322154766,3.1288768005111,3.47236596834669,2.47251540481984,5.00476328456951,5.14303878578123,3.01708870470874,3.09967046931517,3.0522747492789,4.32903149910521,3.80765735512544,3.47563148458268,4.47218509444333,4.20992752922171,4.48913817326191,3.79632057997357,5.1222330835293,2.04615521584845,3.56354734727722,10.9956768259251,20.9840885467875,13.3341016813883,14.1814895671877,6.31251495827183,7.50010825006353,2.31867835620421
|phase1_expression=20.0186058880992,0,0.454999239389536,0,0,0,0.233612640595526,5.16493293766305,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,2.39681021903688,4.02133851127388,2.6648780945253,3.64455481301687,2.09868563438444,14.8267217718372,13.9856722277854,19.9463136345074,1.7008658030214,0.397163804803541,0,2.3998863419011,1.60586496747019,0,0,0.215471232685889,0.570070258369122,0.504060259519861,1.33038306393183,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,380.863783970586,228.14992060095,198.41549896607,432.938375190826,406.412063550275,232.073948748891,1.1330713617802,0.405507724878058,0.734187008646726,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.39986421625363,0,18.7916518784665,2.17608642603403,8.06625117941913,0.771778308107841,0.573066879877513,1.54701627683233,0.202316460859598,1.05798195854407,0,0.677689064138264,4.4464739805557,0,0,2.1314403448383,0.898800331555214,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.489963196859816,0.287536413054709,0,0,0.766124028511126,0.153606533256243,0.263772575460388,0.365950574409639,0,1.3959149950069,0,1.06958773443767,0,0.284743361598206,0,0.151452386666368,0.226714680320357,1.44932244350839,0,0,0,0,0,3.7919993435573,0,0,0,11.2674735821344,1.28326477414318,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,2.16949371466214,12.9468941823586,0.148442139064825,0.173485326766136,1.52232739156071,0.230615497256059,0.301445281105245,0.823120949949934,0.251333182659351,4.94389935468748,1.01219549843938,15.9229899350977,0.161766849947409,3.75430581382669,2.90925151881133,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,1.55759661857696,3.59941638596045,1.52484272487678,1.19832511523858,1.83000241127451,0.125654352112864,0.695297280769106,0.511430914660661,0.83115217823824,1.1356888414743,1.42575109390443,9.33052279575698,10.108910337347,87.5438120487732,0.650602214813519,0.459804208866946,2.88099407688559,6.17889753126432,0.95251098811859,2.8185018462667,4.96619140166563,287.936851632524,0.862271971731369,1.32374256117473,2.11141348996739,4.82230611340665,28.0827721717854,55.3720944770245,67.2907586053975,0.59710280045548,2.1066395619397,3.86021860672073,5.39910648851626,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,0.514523061896422,0,0.528901133327089,1.06644125267617,1.39342003116263,0.902072229254653,0.80673409849337,0.444756087689741,0,0.474529061544512,0,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,1.01825663922657,2.71533482034676,5.19005067188357,3.92066530170395,5.75679577120448,3.45397201251025,1.23397163921801,0.592905254174298,0,0,0.449724224769707,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,1.29708181420028,1.09824565275233,0,0.744281895337007,1.24815069245824,0,0.179397413521912,0.482443521363367,1.47802552133284,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,1.50755631697634,0.714130922658041,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,7.20998584749247,0.518054945597687,2.16973587872267,0,0.54390568381871,0.983528546038072,0.551873492609465,1.28440471990234,1.05490517932983,2.13115428989678,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,1.28528526568723,1.70328102249922,1.42452482933804,0.977321756121456,0.494910368917606,0,0.728341908464944,0,0.377210159511796,1.18120757152309,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,6.12791290356818,1.8006109403131,2.58717367565509,1.92903331528433,2.6601035046341,1.78368817602071,1.48094118541909,2.43571959291679,3.52007562095566,4.66030555900404,0.661585194164886,33.8016818530034,49.569578995643,39.8065304525829,49.897639793311,47.9291427255579,0.291480836629851,2.03967832211561,5.29699730473343,3.92135049130123,8.51894825900674,3.01389531207506,3.14396723758358,1.60144721244566,5.94924504978494,7.83728133012485,4.97519905695926,42.005507192665,0.949007980743406,5.28630614529807,26.1372924788759,69.8354908688326,65.5087691238533,63.2513784544809,38.8471241909079,59.4185988303747,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.972255941720238,0.774958940866387,0.844780627453891,0.821500670520278,0.2604087696879,0.314578033277133,0,0,2.8441000856536,1.82452693761148,1.54066435747241,1.16928740680016,1.9692936523423,2.98022032171897,1.44234539423963,1.9199638532695,2.01932899896295,2.66723823292499,2.11734988787365,2.72882066071307,2.21287235772758,2.33753804363138,69.1527670026395,0.221985953374065,0.0897138566094757,0,6.76163579112667,128.56249568406,1.64836461840539,91.106561108603,7.52358156053045,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0.755393897389701,0,1.80128481289688,0.906284817968409,1.03552062350364,0.31136204275253,1.19707462020309,1.36586884603307,13.3708694387562,1.04806581313991,1.83843508450014,3.11145418922261,2.88449080134452,5.45562656306086,4.54854981174835,3.8021894983536,4.33840585187975,4.58843386602424,3.3293079250532,3.21638626151434,4.28664322154766,3.1288768005111,3.47236596834669,2.47251540481984,5.00476328456951,5.14303878578123,3.01708870470874,3.09967046931517,3.0522747492789,4.32903149910521,3.80765735512544,3.47563148458268,4.47218509444333,4.20992752922171,4.48913817326191,3.79632057997357,5.1222330835293,2.04615521584845,3.56354734727722,10.9956768259251,20.9840885467875,13.3341016813883,14.1814895671877,6.31251495827183,7.50010825006353,2.31867835620421
|short_description=p1@Rdh12
}}
}}

Latest revision as of 20:40, 26 September 2015

Short description:p1@Rdh12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rdh12_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000021548, NM_030017, uc007oab.1, uc007oac.1, uc011yog.1_5end
EntrezGene:Rdh12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rdh12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8380.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1228.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3198.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9432.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2406.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4232.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G487.54
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A2287.94
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E728.08
forelimb, embryo E17.CNhs10598.1517-43C455.37
forelimb, embryo E18.CNhs11008.1520-43B567.29
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D53.92
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A47.21
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C333.80
skin, neonate N00.CNhs11124.650-25G449.57
skin, neonate N03.CNhs11215.662-22H339.81
skin, neonate N06.CNhs11097.693-20I549.90
skin, neonate N10.CNhs11108.762-6C447.93
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H642.01
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D426.14
stomach, embryo E17.CNhs11006.1035-18D569.84
stomach, embryo E18.CNhs10999.1286-20C665.51
stomach, neonate N03.CNhs11193.1340-24B863.25
stomach, neonate N07.CNhs11210.718-18A938.85
stomach, neonate N25.CNhs11104.1355-25E459.42
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B469.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F5128.56
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D591.11
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:80309891..80309910,%2B&oldid=4273182"