FFCP PHASE1:Mm9::chr12:38606769..38606800,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:38606769..38606800,+
|short_description=p3@Dgkb
|description=CAGE_peak_3_at_Dgkb_5end
|association_with_transcript=8bp_to_ENSMUST00000084204,uc007nki.1,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217480 | |EntrezGene=217480 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2037 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TSN3,Q6NS52 | |UniProt=Q3TSN3,Q6NS52 | ||
|association_with_transcript=8bp_to_ENSMUST00000084204,uc007nki.1,uc007nkj.1_5end | |||
|cluster_id=chr12:38606769..38606800,+ | |||
|description=CAGE_peak_3_at_Dgkb_5end | |||
|id=chr12:38606769..38606800,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.86e-11!71;UBERON:0003075!9.86e-11!71;UBERON:0007284!9.86e-11!71;UBERON:0001049!3.41e-09!52;UBERON:0005068!3.41e-09!52;UBERON:0006241!3.41e-09!52;UBERON:0007135!3.41e-09!52;UBERON:0001017!4.12e-09!73;UBERON:0005743!4.12e-09!73;UBERON:0004121!9.08e-09!102;UBERON:0000924!9.08e-09!102;UBERON:0006601!9.08e-09!102;UBERON:0000955!9.36e-09!50;UBERON:0006238!9.36e-09!50;UBERON:0000073!1.29e-08!75;UBERON:0001016!1.29e-08!75;UBERON:0002616!3.45e-08!49;UBERON:0000033!1.24e-07!63;UBERON:0002021!3.43e-07!10;UBERON:0000411!3.43e-07!10;UBERON:0001950!3.43e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.45e-14,54;UBERON:0001049,2.20e-12,52;UBERON:0005068,2.20e-12,52;UBERON:0006241,2.20e-12,52;UBERON:0007135,2.20e-12,52;UBERON:0001017,7.14e-12,73;UBERON:0002021,1.13e-11,10;UBERON:0000411,1.13e-11,10;UBERON:0001950,1.13e-11,10;UBERON:0001016,2.74e-11,75;UBERON:0002020,5.47e-11,34;UBERON:0002346,2.93e-10,64;UBERON:0003075,2.93e-10,64;UBERON:0007284,2.93e-10,64;UBERON:0000955,8.87e-10,47;UBERON:0006238,8.87e-10,47;UBERON:0002616,6.43e-09,46;UBERON:0003080,1.04e-08,40;UBERON:0003528,2.77e-08,29;UBERON:0002791,2.77e-08,29;UBERON:0001893,2.77e-08,29;UBERON:0010371,5.87e-08,73;UBERON:0002780,7.09e-08,39;UBERON:0001890,7.09e-08,39;UBERON:0006240,7.09e-08,39;UBERON:0004121,1.72e-07,95;UBERON:0000924,1.72e-07,95;UBERON:0006601,1.72e-07,95;UBERON:0002619,2.50e-07,17;UBERON:0003056,8.97e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.98781686856452,0,0,0,8.8092704799511,3.44755812830007,5.37622866396852,0.131886287730194,0,0.52091337055676,2.23346399201105,12.380777420697,11.4598685832608,7.66034322231536,7.54569908235246,0.559198337475902,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,1.17588707135705,0.502666365318702,0.741584903203122,0.578397427679647,0,0.485300549842228,0,0,0,0.878342391034642,0.41889341362691,0.766371165625774,0,0,0,11.3840885947665,8.6925114535539,0.628271760564322,3.99795936442236,5.37002460393694,7.89594569326328,7.94982189032012,0.712875546952214,0,0.252722758433675,0.420883711772948,0,0.229902104433473,0,0.90422890701429,0.340182495756639,0.2562274405697,0.281105173679186,1.29351685369508,0,0,0,0.43839146485515,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,9.04246778825747,0.617427674275707,0,0,0,0.928946687441754,2.31961430379768,4.03367049246685,3.33567065767305,2.09248188723815,0,3.29397909448022,1.50801125280162,1.39269530428806,1.9496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.685491075658373,0,0.814605311381257,0.387904974335251,0.561086559122548,0.316182685621286,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0.568474235311454,0.814824882210129,1.01847051465113,1.87752198630802,1.84256883185997,1.19021820443007,1.36593553500459,5.04432461139811,3.32197034473162,0.797273843287435,0.983179888294428,0.690739927463582,0.144649058581512,0,0,0,0,8.66973185934077,7.2671245687166,0,0,0,0.390438744296638,3.44677436372478,0,0,0,1.21443210502468,0.292255857911312,0.790575555893047,32.4534529586025,0.709700426041343,0.534196811001766,0.977321756121456,1.64970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.363533729477506,0.356497378384721,2.52829406348653,0,0,0.680879211507576,0.18006109403131,0,0.643011105094777,1.77340233642274,0.535106452806212,0.987294123612726,0,0,0,0.661585194164886,0.32977250588296,0.322928853391811,0.0603129249281559,0.238744688006273,0,0,13.3506217447567,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0,0,0.506868376472335,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0.295379054349154,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,3.95326289831947,2.30162618253588,4.01026859407578,3.09335728218638,3.42541259885321,1.5107877947794,2.02506750069542,4.05289082901798,3.17199686288943,4.14208249401456,0.207574695168353,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,1.03017528619447,2.56735367673452,1.01078884705519,2.28131369901216,1.13175804831646,1.03005658216871,1.15245274328765,1.20614484806788,2.85776214769844,0.579421629724277,0.192909220463705,1.64834360321323,2.20798380201596,0,3.01708870470874,0.953744759789284,1.59881058295561,1.31753132581463,1.35383372626682,1.09756783723664,1.31534855718921,1.90125759384206,1.68342681497322,0.593175090620871,1.37906275325789,1.22769312950907,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,0.429742108096597,0.956441660344217,0.441182838239031,0.927471342481686 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.98781686856452,0,0,0,8.8092704799511,3.44755812830007,5.37622866396852,0.131886287730194,0,0.52091337055676,2.23346399201105,12.380777420697,11.4598685832608,7.66034322231536,7.54569908235246,0.559198337475902,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,1.17588707135705,0.502666365318702,0.741584903203122,0.578397427679647,0,0.485300549842228,0,0,0,0.878342391034642,0.41889341362691,0.766371165625774,0,0,0,11.3840885947665,8.6925114535539,0.628271760564322,3.99795936442236,5.37002460393694,7.89594569326328,7.94982189032012,0.712875546952214,0,0.252722758433675,0.420883711772948,0,0.229902104433473,0,0.90422890701429,0.340182495756639,0.2562274405697,0.281105173679186,1.29351685369508,0,0,0,0.43839146485515,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,9.04246778825747,0.617427674275707,0,0,0,0.928946687441754,2.31961430379768,4.03367049246685,3.33567065767305,2.09248188723815,0,3.29397909448022,1.50801125280162,1.39269530428806,1.9496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.685491075658373,0,0.814605311381257,0.387904974335251,0.561086559122548,0.316182685621286,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0.568474235311454,0.814824882210129,1.01847051465113,1.87752198630802,1.84256883185997,1.19021820443007,1.36593553500459,5.04432461139811,3.32197034473162,0.797273843287435,0.983179888294428,0.690739927463582,0.144649058581512,0,0,0,0,8.66973185934077,7.2671245687166,0,0,0,0.390438744296638,3.44677436372478,0,0,0,1.21443210502468,0.292255857911312,0.790575555893047,32.4534529586025,0.709700426041343,0.534196811001766,0.977321756121456,1.64970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.363533729477506,0.356497378384721,2.52829406348653,0,0,0.680879211507576,0.18006109403131,0,0.643011105094777,1.77340233642274,0.535106452806212,0.987294123612726,0,0,0,0.661585194164886,0.32977250588296,0.322928853391811,0.0603129249281559,0.238744688006273,0,0,13.3506217447567,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0,0,0.506868376472335,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0.295379054349154,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,3.95326289831947,2.30162618253588,4.01026859407578,3.09335728218638,3.42541259885321,1.5107877947794,2.02506750069542,4.05289082901798,3.17199686288943,4.14208249401456,0.207574695168353,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,1.03017528619447,2.56735367673452,1.01078884705519,2.28131369901216,1.13175804831646,1.03005658216871,1.15245274328765,1.20614484806788,2.85776214769844,0.579421629724277,0.192909220463705,1.64834360321323,2.20798380201596,0,3.01708870470874,0.953744759789284,1.59881058295561,1.31753132581463,1.35383372626682,1.09756783723664,1.31534855718921,1.90125759384206,1.68342681497322,0.593175090620871,1.37906275325789,1.22769312950907,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,0.429742108096597,0.956441660344217,0.441182838239031,0.927471342481686 | ||
|short_description=p3@Dgkb | |||
}} | }} |
Latest revision as of 14:27, 26 September 2015
Short description: | p3@Dgkb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dgkb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2037 |
Association with transcript: | 8bp_to_ENSMUST00000084204, uc007nki.1, uc007nkj.1_5end |
EntrezGene: | Dgkb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.45e-14 | 54 |
neural tube | 2.20e-12 | 52 |
neural rod | 2.20e-12 | 52 |
future spinal cord | 2.20e-12 | 52 |
neural keel | 2.20e-12 | 52 |
central nervous system | 7.14e-12 | 73 |
occipital lobe | 1.13e-11 | 10 |
visual cortex | 1.13e-11 | 10 |
neocortex | 1.13e-11 | 10 |
nervous system | 2.74e-11 | 75 |
gray matter | 5.47e-11 | 34 |
neurectoderm | 2.93e-10 | 64 |
neural plate | 2.93e-10 | 64 |
presumptive neural plate | 2.93e-10 | 64 |
brain | 8.87e-10 | 47 |
future brain | 8.87e-10 | 47 |
regional part of brain | 6.43e-09 | 46 |
anterior neural tube | 1.04e-08 | 40 |
brain grey matter | 2.77e-08 | 29 |
regional part of telencephalon | 2.77e-08 | 29 |
telencephalon | 2.77e-08 | 29 |
ecto-epithelium | 5.87e-08 | 73 |
regional part of forebrain | 7.09e-08 | 39 |
forebrain | 7.09e-08 | 39 |
future forebrain | 7.09e-08 | 39 |
ectoderm-derived structure | 1.72e-07 | 95 |
ectoderm | 1.72e-07 | 95 |
presumptive ectoderm | 1.72e-07 | 95 |
regional part of cerebral cortex | 2.50e-07 | 17 |
pre-chordal neural plate | 8.97e-07 | 49 |