FFCP PHASE1:Mm9::chr12:109150430..109150441,-: Difference between revisions
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|id=chr12:109150430..109150441,-
|short_description=p@chr12:109150430..109150441,-
|description=CAGE_peak_at_chr12:109150430..109150441,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109150430..109150441,- | |||
|description=CAGE_peak_at_chr12:109150430..109150441,- | |||
|id=chr12:109150430..109150441,- | |||
|ontology_enrichment_celltype=CL:0000117!1.20e-24!23;CL:0000337!1.20e-24!23;CL:0002609!5.18e-20!6;CL:0000540!1.05e-18!33;CL:0000047!1.05e-18!33;CL:0000031!1.05e-18!33;CL:0000404!1.05e-18!33;CL:0000393!2.50e-15!39;CL:0000211!2.50e-15!39;CL:0002319!1.33e-13!43;CL:0000221!3.21e-13!44;CL:0000133!3.21e-13!44;CL:0000055!3.01e-11!50;CL:0002608!5.72e-11!3;CL:0002321!3.92e-07!70;CL:0000220!3.92e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.48e-72,6;CL:0002608,4.90e-53,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.80e-13!34;UBERON:0002791!3.63e-11!29;UBERON:0003528!3.63e-11!29;UBERON:0001893!3.63e-11!29;UBERON:0007811!4.39e-10!86;UBERON:0001017!4.44e-10!73;UBERON:0005743!4.44e-10!73;UBERON:0000153!4.68e-10!94;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0000956!1.21e-08!21;UBERON:0001869!1.21e-08!21;UBERON:0000203!1.21e-08!21;UBERON:0002616!3.15e-08!49;UBERON:0000064!3.23e-08!99;UBERON:0000955!5.19e-08!50;UBERON:0006238!5.19e-08!50;UBERON:0002780!9.39e-08!39;UBERON:0001890!9.39e-08!39;UBERON:0006240!9.39e-08!39;UBERON:0001049!1.31e-07!52;UBERON:0005068!1.31e-07!52;UBERON:0006241!1.31e-07!52;UBERON:0007135!1.31e-07!52;UBERON:0001954!1.51e-07!7;UBERON:0003022!1.51e-07!7;UBERON:0002421!1.51e-07!7;UBERON:0000349!1.51e-07!7;UBERON:0002600!1.51e-07!7;UBERON:0003080!1.66e-07!40;UBERON:0004121!4.92e-07!102;UBERON:0000924!4.92e-07!102;UBERON:0006601!4.92e-07!102;UBERON:0000033!7.38e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.44e-23,7;UBERON:0003022,2.44e-23,7;UBERON:0002421,2.44e-23,7;UBERON:0000349,2.44e-23,7;UBERON:0002600,2.44e-23,7;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002619,4.01e-10,17;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.75507719831198,1.26194976810829,0,0,2.44981598429908,2.30029130443767,3.67687514644008,0,0.127687338085188,0.614426133024974,0.263772575460388,0.274462930807229,0,0,0,0,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.228620419965,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.75507719831198,1.26194976810829,0,0,2.44981598429908,2.30029130443767,3.67687514644008,0,0.127687338085188,0.614426133024974,0.263772575460388,0.274462930807229,0,0,0,0,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.228620419965,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:109150430..109150441,- | |||
}} | }} |
Latest revision as of 16:00, 4 August 2015
Short description: | p@chr12:109150430..109150441, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109150430..109150441, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.48e-72 | 6 |
hippocampal neuron | 4.90e-53 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.44e-23 | 7 |
lobe parts of cerebral cortex | 2.44e-23 | 7 |
hippocampal formation | 2.44e-23 | 7 |
limbic system | 2.44e-23 | 7 |
limbic lobe | 2.44e-23 | 7 |
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of cerebral cortex | 4.01e-10 | 17 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |