FFCP PHASE1:Hg19::chr12:95510716..95510730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55785 | |EntrezGene=55785 | ||
Line 8: | Line 8: | ||
|UniProt=F8VQX5 | |UniProt=F8VQX5 | ||
|association_with_transcript=18bp_to_ENST00000551521_5end | |association_with_transcript=18bp_to_ENST00000551521_5end | ||
|cluster_id=chr12:95510716..95510730,- | |||
|coexpression_cluster_id=C1694 | |coexpression_cluster_id=C1694 | ||
|description=CAGE_peak_3_at_FGD6_5end | |description=CAGE_peak_3_at_FGD6_5end |
Latest revision as of 02:09, 16 September 2015
Short description: | p3@FGD6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGD6_5end |
Coexpression cluster: | C1694_squamous_Prostate_Sebocyte_Gingival_Mallassezderived_clear_Urothelial |
Association with transcript: | 18bp_to_ENST00000551521_5end |
EntrezGene: | FGD6 |
HGNC: | 21740 |
UniProt: | F8VQX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@FGD6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.03e-26 | 13 |
epithelial cell | 2.03e-26 | 253 |
endo-epithelial cell | 7.71e-24 | 42 |
general ecto-epithelial cell | 1.96e-20 | 14 |
epithelial cell of tracheobronchial tree | 3.51e-17 | 9 |
epithelial cell of lower respiratory tract | 3.51e-17 | 9 |
endodermal cell | 3.01e-16 | 58 |
gingival epithelial cell | 4.31e-15 | 3 |
epithelial cell of Malassez | 4.51e-15 | 3 |
bronchial epithelial cell | 1.04e-13 | 3 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.31e-15 | 3 |
urothelium | 1.70e-14 | 5 |
lower respiratory tract epithelium | 1.04e-13 | 3 |
epithelium of bronchus | 1.04e-13 | 3 |
epithelial bud | 3.09e-12 | 37 |
transitional epithelium | 4.23e-12 | 6 |
jaw skeleton | 2.03e-11 | 4 |
splanchnocranium | 2.03e-11 | 4 |
respiratory system epithelium | 2.12e-11 | 28 |
mammary gland | 7.96e-11 | 4 |
Showing 1 to 10 of 46 entries
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.42e-10 | 2 |
squamous cell carcinoma | 1.04e-07 | 14 |
carcinoma | 4.99e-07 | 106 |
Showing 1 to 3 of 3 entries