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FFCP PHASE1:Mm9::chr11:98698089..98698145,+: Difference between revisions

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(Created page with "{{FFCP |id=chr11:98698089..98698145,+ |short_description=p1@Rapgefl1 |description=CAGE_peak_1_at_Rapgefl1_5end |association_with_transcript=0bp_to_ENSMUST00000107479,NM_00...")
 
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{{FFCP
{{FFCP
|id=chr11:98698089..98698145,+
|DHSsupport=NA
|short_description=p1@Rapgefl1
|DPIdataset=NA
|description=CAGE_peak_1_at_Rapgefl1_5end
|association_with_transcript=0bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end
|EntrezGene=268480
|EntrezGene=268480
|HGNC=
|HGNC=
|MCL_coexpression_id=1610
|TSSclassifier=NA
|UniProt=Q68EF8
|UniProt=Q68EF8
|association_with_transcript=0bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end
|cluster_id=chr11:98698089..98698145,+
|description=CAGE_peak_1_at_Rapgefl1_5end
|id=chr11:98698089..98698145,+
|ontology_enrichment_celltype=CL:0000117!6.73e-07!23;CL:0000337!6.73e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.81e-07,23;CL:0000337,4.81e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-15,54;UBERON:0010371,5.09e-15,73;UBERON:0001049,3.45e-14,52;UBERON:0005068,3.45e-14,52;UBERON:0006241,3.45e-14,52;UBERON:0007135,3.45e-14,52;UBERON:0004121,7.97e-14,95;UBERON:0000924,7.97e-14,95;UBERON:0006601,7.97e-14,95;UBERON:0002020,2.17e-12,34;UBERON:0002346,2.30e-12,64;UBERON:0003075,2.30e-12,64;UBERON:0007284,2.30e-12,64;UBERON:0000955,7.92e-12,47;UBERON:0006238,7.92e-12,47;UBERON:0001017,1.11e-11,73;UBERON:0002616,2.78e-11,46;UBERON:0003056,8.47e-11,49;UBERON:0003080,1.37e-10,40;UBERON:0001016,1.42e-10,75;UBERON:0002780,3.81e-10,39;UBERON:0001890,3.81e-10,39;UBERON:0006240,3.81e-10,39;UBERON:0003528,7.09e-10,29;UBERON:0002791,7.09e-10,29;UBERON:0001893,7.09e-10,29;UBERON:0002021,9.06e-08,10;UBERON:0000411,9.06e-08,10;UBERON:0001950,9.06e-08,10;UBERON:0000956,2.37e-07,21;UBERON:0001869,2.37e-07,21;UBERON:0000203,2.37e-07,21;UBERON:0002619,7.17e-07,17
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|phase1_expression=11.3705681444404,8.37540978334467,10.4649825059593,16.3330674105688,20.0358291978539,3.69334398206158,3.03696432774183,0,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.946386496074713,0.685572168028694,0.84877930359606,8.92954546586233,1.29078236561151,0.783599367416806,5.91971964335605,6.8822784320151,2.8711598205751,6.8921919385452,3.44753972297422,12.5415456841207,12.3494763582366,3.32595765982957,0.635030673459631,0,0,3.46621943701529,3.32469290716985,2.6542016314108,0,0,0,1.17646297606203,0,0.485510353031154,0.755380907853464,0.608261587317087,0.183546752161682,3.12956537739216,0,2.41654801007919,1.1665793944457,0.699932108126813,1.43752564364972,0.671130424230945,0,0,0.514518872071894,0.85960031981627,0,8.6996078169627,7.93486468908049,12.0427966666174,0,0,0.449949858640699,1.97773272513395,0,1.79760066311043,2.68952813725088,4.87341177849845,4.05017814995072,5.04779907243317,27.4224945027651,26.0624878322904,3.1847607795888,1.82106394934649,6.43453150627015,28.6301290598411,24.2605942361857,17.8183578577242,8.5726087024626,9.33173964744578,9.37644067002168,13.1216009530649,14.069065250792,20.3221669543157,29.7574871328404,21.9252388430619,15.4711540034999,0.151452386666368,0.0755715601067855,2.02905142091174,0,0,0.539703191637817,0,0.448026887097336,4.91555470461132,0.681721290312231,0.259786004602869,0.35333957451034,6.05626705039726,1.28326477414318,5.09610479413291,7.11066703153331,2.59789249213457,0.760079596425296,3.0331466700887,4.33898742932428,0,0.742210695324124,1.38788261412909,0.608930956624282,0.922461989024234,1.05505848386836,1.76383060703557,0.251333182659351,0.247194967734374,0.578397427679647,0,1.7794353494215,1.98757366614354,2.90925151881133,24.2309289583559,14.3462590535658,22.2013509222262,14.3055950916811,0,0,0,20.2217363196511,22.8750301409313,8.67015029578764,57.7096743038358,52.1659532953874,17.2464076984435,26.76980840618,2.64782346010822,2.73695335342205,1.26361379216837,9.46988351489133,4.29397461776922,3.44853156650209,3.60124259610698,5.42537344208574,4.150226448231,3.33095672740609,2.81105173679186,8.2785078636485,3.01795190105979,5.67318240503458,7.38994721488585,9.20622076195814,15.2925987074079,33.432207986128,33.5424882344948,1.79130840136644,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,0.23674473558521,1.37734962223183,1.3884040159864,0.697601834251224,0,0.233530684734339,0.987359099480883,0.492502392237286,0.405344047729279,0.292399974850665,0.658650345873152,0.536825675041487,67.713363437649,26.3435807690968,10.9038198384653,5.81791246659797,0.639864751605702,1.62565670302307,2.19074684247559,1.00841762311671,2.89091456998331,3.04361001780095,12.8122846617018,2.14108641141214,5.27803938480566,7.16243299348143,6.04388670069272,14.3811105384675,14.9135254413539,11.3510525754989,1.89667900953082,2.17072173958485,3.38123207019241,2.24016460629846,2.32742984601151,1.8936671370386,1.45444035385792,1.77132177575523,1.56998727841375,1.1105744752962,0,0.500535317148282,0.786235980452812,0.224862112384854,0.405720242777006,0.241177159752417,0.763877555344259,0.575392274901621,0.324270453550071,0,2.87536413054709,0.744281895337007,2.18426371180192,0.505157755894224,0.896987067609561,0,0.923765950833023,1.32643988239339,2.11854469374634,3.05541154395339,1.87752198630802,3.01511263395268,3.57065461329021,3.70753930929818,1.7339865851681,1.10732344824387,0.478364305972461,3.60499292374624,1.38147985492716,0.867894351489069,1.50791283939272,0.54390568381871,0.983528546038072,3.03530420935206,13.1651483789989,11.7211686592203,0.819674726883377,1.26235463602186,0.631016438832513,0,0.861693590931196,1.43381278771531,1.33679204449436,2.26461224631066,0.809621403349789,1.75353514746787,1.18586333383957,35.9879874392424,4.11626247103979,3.02711526234334,3.58351310577867,1.97964147567043,6.63725691699814,1.45668381692989,2.11626489875326,0.943025398779491,2.06711325016541,1.22974059177571,2.06742634534577,6.5436071305951,3.20847640546249,5.05658812697306,9.48767477174989,8.25084345985495,5.44703369206061,2.52085531643834,4.01011919726539,3.64372959553707,4.07882537377229,4.28085162244969,3.78462747384878,2.13125464380219,0.704015124191131,0,3.96951116498931,69.2522262354216,63.4555196914909,44.5712515219072,55.1500229294491,44.8104656304017,11.3677526285642,17.0591277849669,0,1.857481811669,0.925972636848558,0.565105371014073,1.0935538217682,0.686334519619568,0.169978429993855,0.279902904647316,0.138199973804424,24.821436068393,3.63786392618306,6.50622294805916,13.068646239438,17.1452402731864,22.4913440658563,25.3544971203463,25.4572643634035,26.699106082371,12.4430374360121,11.1841076355647,0.56369293868419,1.04661582230785,1.15820943319968,2.52786544847262,2.0665571756437,1.68956125490778,1.29092962510329,1.43224823328345,2.09718688851422,1.44950472495604,1.15212002503146,0,0.810900861160657,2.67048488628551,1.68897069871134,1.25318686967237,1.98681354781265,0.961563596159751,1.32920574457119,1.21159739937777,1.447929326445,0.907435666231565,0.877120926657772,1.15454209968395,1.28564592399726,65.0716200975657,0.887943813496259,0.269141569828427,0,28.2056807286998,6.94425159169373,14.6521299413812,73.7427224031987,6.52043735245972,44.6153955667483,40.5086208126316,41.2484769676366,60.1486138202907,34.2541259885321,38.5250887668747,49.2766425169218,39.1779446805072,45.7673833074047,48.6694693046711,1.55681021376265,3.19219898720825,3.41467211508268,12.8846560046196,4.61148957781561,7.90527086335061,7.77863547305653,9.47761263298913,8.98573786857083,8.84440241173291,9.88569269571935,9.05406438653166,7.95952813494,8.38729496503788,8.04096565378586,6.19181798667996,9.38663040153329,6.94473193669338,6.1812885120496,6.32955356577908,8.57173130963539,8.87379030796687,9.53744759789284,10.174249164263,9.50504742194839,8.96914843651771,9.14639864363863,7.3659519202596,8.41985505844343,7.2948495315506,10.0839765405548,6.50129583678719,6.13846564754534,8.52152626522813,18.5190346541896,19.2354145012218,13.3341016813883,22.1317185669747,8.41668661102911,11.9119366324538,4.40548887678801
|short_description=p1@Rapgefl1
}}
}}

Latest revision as of 03:29, 26 September 2015

Short description:p1@Rapgefl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rapgefl1_5end
Coexpression cluster:MCL_coexpression_mm9:1610
Association with transcript: 0bp_to_ENSMUST00000107479, NM_001080925, uc007lhr.1_5end
EntrezGene:Rapgefl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rapgefl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B912.54
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I222.20
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D557.71
cortex, neonate N30.CNhs11107.1392-42F252.17
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B226.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C433.43
forelimb, embryo E18.CNhs11008.1520-43B533.54
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E867.71
hippocampus, neonate N00.CNhs11228.627-43G126.34
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E314.91
intestine, neonate N30.CNhs11131.1384-42G111.35
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C369.25
skin, neonate N00.CNhs11124.650-25G463.46
skin, neonate N03.CNhs11215.662-22H344.57
skin, neonate N06.CNhs11097.693-20I555.15
skin, neonate N10.CNhs11108.762-6C444.81
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H624.82
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D413.07
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C622.49
stomach, neonate N03.CNhs11193.1340-24B825.35
stomach, neonate N07.CNhs11210.718-18A925.46
stomach, neonate N25.CNhs11104.1355-25E426.70
stomach, neonate N30.CNhs11134.1386-42I112.44
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B465.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E428.21
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E514.65
vagina, adult.CNhs10502.89-27D573.74
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D760.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A538.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.67
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F918.52
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C222.13
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.81e-0723
neuroblast (sensu Vertebrata)4.81e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.81e-1554
ecto-epithelium5.09e-1573
neural tube3.45e-1452
neural rod3.45e-1452
future spinal cord3.45e-1452
neural keel3.45e-1452
ectoderm-derived structure7.97e-1495
ectoderm7.97e-1495
presumptive ectoderm7.97e-1495
gray matter2.17e-1234
neurectoderm2.30e-1264
neural plate2.30e-1264
presumptive neural plate2.30e-1264
brain7.92e-1247
future brain7.92e-1247
central nervous system1.11e-1173
regional part of brain2.78e-1146
pre-chordal neural plate8.47e-1149
anterior neural tube1.37e-1040
nervous system1.42e-1075
regional part of forebrain3.81e-1039
forebrain3.81e-1039
future forebrain3.81e-1039
brain grey matter7.09e-1029
regional part of telencephalon7.09e-1029
telencephalon7.09e-1029
occipital lobe9.06e-0810
visual cortex9.06e-0810
neocortex9.06e-0810
cerebral cortex2.37e-0721
cerebral hemisphere2.37e-0721
pallium2.37e-0721
regional part of cerebral cortex7.17e-0717
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