FFCP PHASE1:Mm9::chr11:62416617..62416668,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62416617..62416668,+
|short_description=p1@Snord49b
|description=CAGE_peak_1_at_Snord49b_5end
|association_with_transcript=29bp_to_NR_028526,uc011xwc.1_5e...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100217426 | |EntrezGene=100217426 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=657 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_NR_028526,uc011xwc.1_5end | |||
|cluster_id=chr11:62416617..62416668,+ | |||
|description=CAGE_peak_1_at_Snord49b_5end | |||
|id=chr11:62416617..62416668,+ | |||
|ontology_enrichment_celltype=CL:0002320!1.19e-14!46;CL:0000134!1.19e-14!46;CL:0000063!1.18e-13!66;CL:0000988!1.42e-12!32;CL:0002032!1.42e-12!32;CL:0000037!1.42e-12!32;CL:0000566!1.42e-12!32;CL:0000837!1.42e-12!32;CL:0000219!3.39e-12!54;CL:0000144!6.79e-11!121;CL:0000012!6.79e-11!121;CL:0000034!1.19e-10!97;CL:0002031!1.29e-09!25;CL:0002371!1.45e-09!118;CL:0000723!3.82e-09!91;CL:0000048!3.82e-09!91;CL:0000049!2.22e-08!19;CL:0000548!2.74e-08!115;CL:0000004!2.74e-08!115;CL:0000255!2.74e-08!115;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.04e-16,46;CL:0000134,1.04e-16,46;CL:0000988,8.88e-16,32;CL:0002032,8.88e-16,32;CL:0000037,8.88e-16,32;CL:0000837,8.88e-16,32;CL:0000219,1.16e-13,54;CL:0000034,4.68e-12,97;CL:0002031,6.73e-12,25;CL:0000049,1.99e-10,19;CL:0000723,2.46e-10,91;CL:0000048,2.46e-10,91;CL:0000738,9.01e-09,17;CL:0002087,9.01e-09,17;CL:0000763,4.07e-08,16;CL:0000838,1.82e-07,12;CL:0000084,8.36e-07,11;CL:0000827,8.36e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.19e-14!46;UBERON:0002193!2.18e-10!48;UBERON:0002405!4.25e-10!70;UBERON:0002390!1.51e-09!45;UBERON:0003061!1.51e-09!45;UBERON:0002371!9.12e-09!16;UBERON:0002204!7.37e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.04e-16,46;UBERON:0002193,1.19e-11,48;UBERON:0002405,1.19e-11,48;UBERON:0002390,1.21e-10,45;UBERON:0003061,1.21e-10,45;UBERON:0002371,2.56e-10,16;UBERON:0002204,8.33e-08,32;UBERON:0001474,4.70e-07,22;UBERON:0004765,4.70e-07,22;UBERON:0001434,4.70e-07,22 | |||
|phase1_expression=0.640595388419176,1.74487703819681,3.18499467572675,0.60492842261366,0.500895729946347,2.51818907867835,2.33612640595526,2.96983643915625,13.093351160105,13.8098070529976,11.8140398075598,8.61539317149633,1.54080656938085,1.39872643870396,2.33176833270964,5.26435695213547,2.79824751251259,3.47008381894061,2.05671650408608,3.39511721438424,1.78590909317247,7.74469419366905,12.5375898786689,3.03985603307473,3.44113921600755,5.16808767703518,3.01533397311352,3.01659725760245,0.950117097281869,0.756090389279792,3.76941868114018,3.17515336729816,3.07532393792285,0,0.577703239502549,0.831173226792462,0.612508068787107,26.3674927364252,28.1280724028568,17.7998072951091,54.1172968988533,34.8353197328807,27.6740901227758,1.6366586336825,1.01376931219515,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0.58328969722285,0.419959264876088,0,10.9058693937529,3.62681071005672,4.03312558970957,6.43148590089868,1.14613375975503,0,0.202316460859598,0,1.26766280701236,1.0165335962074,0.889294796111139,8.99899717281399,9.88866362566974,12.0781619540837,4.19440154725767,3.45796474789399,0.311068836925433,0.270011876663381,0.210324961351382,2.85650984403804,3.3130281142742,0.244981598429908,0.383381884072945,0.919218786610021,4.40463523997555,3.44755812830007,2.91852413186863,0.395658863190582,0.274462930807229,1.04182674111352,4.4669279840221,2.8138130501584,3.51435969886663,1.17851434189467,1.28134512719193,0.745597783301202,6.81535739998656,2.19157524309678,2.6087803983151,1.72084775396277,14.9593693415705,1.61910957491345,0.649776417447669,0.896053774194671,1.40444420131752,1.02258193546835,2.07828803682295,1.7666978725517,0.14084341977668,1.28326477414318,0,0,3.24736561516821,2.28023878927589,5.05524445014783,0.68510327831436,1.8125651855302,0.445326417194474,0.346970653532272,2.13125834818499,0.461230994512117,1.05505848386836,1.05829836422134,0.251333182659351,0.494389935468748,0.578397427679647,1.76922110389975,1.29413479957927,0.883366073841574,0.484875253135222,1.86391761218122,1.17112318804619,1.04723353406728,0,33.3086046126458,54.5911485204001,33.8006804014352,2.69623150928681,3.66000482254901,0.251308704225729,2.25971616249959,0.767146371990992,2.49345653471472,2.75810147215188,0.611036183101898,2.11491850037158,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.657587197282725,0,0,0,0.199034266818493,60.3903341089382,47.6093628162223,38.0779089190094,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.402619256281115,1.68231958851302,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.515469845288373,1.4117846723634,2.44615848229357,1.33157938278791,1.42358718463353,1.97638745668813,0.502670417600539,1.1937388322469,1.16978452271472,0,0.432276099749388,0.597423819763102,1.13800740571849,1.02823661348756,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.889357881261447,1.83529616287703,1.96558995113203,2.24862112384854,1.01430060694251,0.241177159752417,3.56476192493988,2.01387296215567,1.94562272130042,2.19649130550465,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,1.92977408545347,0.923765950833023,0.189491411770485,0.977789858652155,1.01847051465113,0.938760993154008,0.335012514883631,1.19021820443007,0.780534591431195,0.157635144106191,0.664394068946325,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,6.03165135757089,11.4220193601929,2.45882136509518,1.37968373152366,3.21101179975584,2.57865710502847,0.163934945376675,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,3.98235415019888,0.242780636154981,0.604647113929502,0.754420319023592,0.590603785761546,2.15204603560749,0.775284879504663,0.363533729477506,1.06949213515416,1.26414703174326,2.10837217149998,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0.304464949114599,1.40803024838226,1.90648863777438,2.20528398054962,0.49465875882444,0.807322133479528,0.663442174209714,0.238744688006273,0,0.582961673259701,2.78137953015765,4.44264290074417,2.06386867963222,3.51869602002452,1.88368457004691,2.05041341581538,2.74533807847827,14.10820968949,16.6542228265153,12.4379976423981,0,0.316335993581135,0.609958401380546,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0.388844919875379,0,5.07323644815771,0.598066184175915,0,0.388902376688095,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0,3.744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|phase1_expression=0.640595388419176,1.74487703819681,3.18499467572675,0.60492842261366,0.500895729946347,2.51818907867835,2.33612640595526,2.96983643915625,13.093351160105,13.8098070529976,11.8140398075598,8.61539317149633,1.54080656938085,1.39872643870396,2.33176833270964,5.26435695213547,2.79824751251259,3.47008381894061,2.05671650408608,3.39511721438424,1.78590909317247,7.74469419366905,12.5375898786689,3.03985603307473,3.44113921600755,5.16808767703518,3.01533397311352,3.01659725760245,0.950117097281869,0.756090389279792,3.76941868114018,3.17515336729816,3.07532393792285,0,0.577703239502549,0.831173226792462,0.612508068787107,26.3674927364252,28.1280724028568,17.7998072951091,54.1172968988533,34.8353197328807,27.6740901227758,1.6366586336825,1.01376931219515,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0.58328969722285,0.419959264876088,0,10.9058693937529,3.62681071005672,4.03312558970957,6.43148590089868,1.14613375975503,0,0.202316460859598,0,1.26766280701236,1.0165335962074,0.889294796111139,8.99899717281399,9.88866362566974,12.0781619540837,4.19440154725767,3.45796474789399,0.311068836925433,0.270011876663381,0.210324961351382,2.85650984403804,3.3130281142742,0.244981598429908,0.383381884072945,0.919218786610021,4.40463523997555,3.44755812830007,2.91852413186863,0.395658863190582,0.274462930807229,1.04182674111352,4.4669279840221,2.8138130501584,3.51435969886663,1.17851434189467,1.28134512719193,0.745597783301202,6.81535739998656,2.19157524309678,2.6087803983151,1.72084775396277,14.9593693415705,1.61910957491345,0.649776417447669,0.896053774194671,1.40444420131752,1.02258193546835,2.07828803682295,1.7666978725517,0.14084341977668,1.28326477414318,0,0,3.24736561516821,2.28023878927589,5.05524445014783,0.68510327831436,1.8125651855302,0.445326417194474,0.346970653532272,2.13125834818499,0.461230994512117,1.05505848386836,1.05829836422134,0.251333182659351,0.494389935468748,0.578397427679647,1.76922110389975,1.29413479957927,0.883366073841574,0.484875253135222,1.86391761218122,1.17112318804619,1.04723353406728,0,33.3086046126458,54.5911485204001,33.8006804014352,2.69623150928681,3.66000482254901,0.251308704225729,2.25971616249959,0.767146371990992,2.49345653471472,2.75810147215188,0.611036183101898,2.11491850037158,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.657587197282725,0,0,0,0.199034266818493,60.3903341089382,47.6093628162223,38.0779089190094,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.402619256281115,1.68231958851302,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.515469845288373,1.4117846723634,2.44615848229357,1.33157938278791,1.42358718463353,1.97638745668813,0.502670417600539,1.1937388322469,1.16978452271472,0,0.432276099749388,0.597423819763102,1.13800740571849,1.02823661348756,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.889357881261447,1.83529616287703,1.96558995113203,2.24862112384854,1.01430060694251,0.241177159752417,3.56476192493988,2.01387296215567,1.94562272130042,2.19649130550465,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,1.92977408545347,0.923765950833023,0.189491411770485,0.977789858652155,1.01847051465113,0.938760993154008,0.335012514883631,1.19021820443007,0.780534591431195,0.157635144106191,0.664394068946325,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,6.03165135757089,11.4220193601929,2.45882136509518,1.37968373152366,3.21101179975584,2.57865710502847,0.163934945376675,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,3.98235415019888,0.242780636154981,0.604647113929502,0.754420319023592,0.590603785761546,2.15204603560749,0.775284879504663,0.363533729477506,1.06949213515416,1.26414703174326,2.10837217149998,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0.304464949114599,1.40803024838226,1.90648863777438,2.20528398054962,0.49465875882444,0.807322133479528,0.663442174209714,0.238744688006273,0,0.582961673259701,2.78137953015765,4.44264290074417,2.06386867963222,3.51869602002452,1.88368457004691,2.05041341581538,2.74533807847827,14.10820968949,16.6542228265153,12.4379976423981,0,0.316335993581135,0.609958401380546,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0.388844919875379,0,5.07323644815771,0.598066184175915,0,0.388902376688095,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0,3.744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| ||
|short_description=p1@Snord49b | |||
}} | }} |
Latest revision as of 21:19, 1 October 2015
Short description: | p1@Snord49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snord49b_5end |
Coexpression cluster: | MCL_coexpression_mm9:657 |
Association with transcript: | 29bp_to_NR_028526, uc011xwc.1_5end |
EntrezGene: | Snord49b |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.04e-16 | 46 |
mesenchymal cell | 1.04e-16 | 46 |
hematopoietic cell | 8.88e-16 | 32 |
hematopoietic oligopotent progenitor cell | 8.88e-16 | 32 |
hematopoietic stem cell | 8.88e-16 | 32 |
hematopoietic multipotent progenitor cell | 8.88e-16 | 32 |
motile cell | 1.16e-13 | 54 |
stem cell | 4.68e-12 | 97 |
hematopoietic lineage restricted progenitor cell | 6.73e-12 | 25 |
common myeloid progenitor | 1.99e-10 | 19 |
somatic stem cell | 2.46e-10 | 91 |
multi fate stem cell | 2.46e-10 | 91 |
leukocyte | 9.01e-09 | 17 |
nongranular leukocyte | 9.01e-09 | 17 |
myeloid cell | 4.07e-08 | 16 |
lymphoid lineage restricted progenitor cell | 1.82e-07 | 12 |
T cell | 8.36e-07 | 11 |
pro-T cell | 8.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.04e-16 | 46 |
hemolymphoid system | 1.19e-11 | 48 |
immune system | 1.19e-11 | 48 |
hematopoietic system | 1.21e-10 | 45 |
blood island | 1.21e-10 | 45 |
bone marrow | 2.56e-10 | 16 |
musculoskeletal system | 8.33e-08 | 32 |
bone element | 4.70e-07 | 22 |
skeletal element | 4.70e-07 | 22 |
skeletal system | 4.70e-07 | 22 |