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FFCP PHASE1:Mm9::chr11:56825300..56825329,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:56825300..56825329,+
|DHSsupport=NA
|short_description=p1@Gria1
|DPIdataset=NA
|description=CAGE_peak_1_at_Gria1_5end
|association_with_transcript=0bp_to_ENSMUST00000036315_5end
|EntrezGene=14799
|EntrezGene=14799
|HGNC=
|HGNC=
|MCL_coexpression_id=362
|TSSclassifier=NA
|UniProt=P23818
|UniProt=P23818
|association_with_transcript=0bp_to_ENSMUST00000036315_5end
|cluster_id=chr11:56825300..56825329,+
|description=CAGE_peak_1_at_Gria1_5end
|id=chr11:56825300..56825329,+
|ontology_enrichment_celltype=CL:0000117!7.80e-13!23;CL:0000337!7.80e-13!23;CL:0000540!2.71e-10!33;CL:0000047!2.71e-10!33;CL:0000031!2.71e-10!33;CL:0000404!2.71e-10!33;CL:0002319!1.26e-09!43;CL:0000221!2.14e-09!44;CL:0000133!2.14e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-15,23;CL:0000337,2.11e-15,23;CL:0000540,1.84e-08,33;CL:0000047,1.84e-08,33;CL:0000031,1.84e-08,33;CL:0000404,1.84e-08,33;CL:0002319,1.06e-07,43;CL:0000221,2.67e-07,44;CL:0000133,2.67e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.70e-27!73;UBERON:0005743!3.70e-27!73;UBERON:0000073!1.05e-25!75;UBERON:0001016!1.05e-25!75;UBERON:0001049!5.46e-25!52;UBERON:0005068!5.46e-25!52;UBERON:0006241!5.46e-25!52;UBERON:0007135!5.46e-25!52;UBERON:0000955!2.03e-24!50;UBERON:0006238!2.03e-24!50;UBERON:0002616!1.28e-23!49;UBERON:0000033!1.73e-22!63;UBERON:0002346!4.50e-22!71;UBERON:0003075!4.50e-22!71;UBERON:0007284!4.50e-22!71;UBERON:0002020!1.81e-20!34;UBERON:0003056!3.37e-20!49;UBERON:0003080!8.81e-20!40;UBERON:0002780!4.55e-19!39;UBERON:0001890!4.55e-19!39;UBERON:0006240!4.55e-19!39;UBERON:0004121!1.71e-18!102;UBERON:0000924!1.71e-18!102;UBERON:0006601!1.71e-18!102;UBERON:0002791!6.70e-18!29;UBERON:0003528!6.70e-18!29;UBERON:0001893!6.70e-18!29;UBERON:0000956!3.35e-13!21;UBERON:0001869!3.35e-13!21;UBERON:0000203!3.35e-13!21;UBERON:0000025!3.25e-12!114;UBERON:0004111!2.73e-11!122;UBERON:0002619!3.57e-11!17;UBERON:0007811!2.32e-10!86;UBERON:0000153!7.87e-10!94;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0000468!6.15e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.11e-32,54;UBERON:0001049,3.61e-30,52;UBERON:0005068,3.61e-30,52;UBERON:0006241,3.61e-30,52;UBERON:0007135,3.61e-30,52;UBERON:0002346,4.42e-27,64;UBERON:0003075,4.42e-27,64;UBERON:0007284,4.42e-27,64;UBERON:0000955,5.74e-27,47;UBERON:0006238,5.74e-27,47;UBERON:0001017,9.61e-27,73;UBERON:0002616,5.24e-26,46;UBERON:0001016,2.45e-25,75;UBERON:0002020,8.68e-25,34;UBERON:0003080,2.05e-23,40;UBERON:0003056,1.00e-22,49;UBERON:0002780,1.53e-22,39;UBERON:0001890,1.53e-22,39;UBERON:0006240,1.53e-22,39;UBERON:0003528,1.25e-21,29;UBERON:0002791,1.25e-21,29;UBERON:0001893,1.25e-21,29;UBERON:0010371,8.56e-21,73;UBERON:0004121,9.33e-20,95;UBERON:0000924,9.33e-20,95;UBERON:0006601,9.33e-20,95;UBERON:0010314,7.28e-18,92;UBERON:0000956,7.46e-16,21;UBERON:0001869,7.46e-16,21;UBERON:0000203,7.46e-16,21;UBERON:0002619,2.31e-13,17;UBERON:0000025,4.29e-13,114;UBERON:0004111,1.01e-11,122;UBERON:0002021,5.25e-09,10;UBERON:0000411,5.25e-09,10;UBERON:0001950,5.25e-09,10;UBERON:0003076,3.74e-07,12;UBERON:0003057,3.74e-07,12;UBERON:0002420,6.38e-07,8;UBERON:0007245,6.38e-07,8;UBERON:0010009,6.38e-07,8;UBERON:0010011,6.38e-07,8;UBERON:0000454,6.38e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1787446105161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,5.71184075109627,18.0819806139084,0.55994568650145,1.43752564364972,0,0,0,0,0,0,10.1158230429799,16.9277113367051,10.775133859605,0.677689064138264,0,0,0,0,0.898800331555214,4.61061966385865,14.101787273953,12.2855403881839,10.5162480675691,9.14083150092171,14.1355866209033,18.4961106814581,15.1435844208813,10.1114066527102,44.0463523997555,49.0319378247121,36.0975353152172,16.0901271030836,17.6571152152651,11.9810075228055,18.9844439320939,48.3975844627245,51.6458077485618,18.8562294703147,19.5049202694771,14.3527573285481,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,2.24711072210803,0,0,0,0.281686839553361,0,0,0,0,0,0,1.48439043634778,0,0,0.867426633830679,0.913396434936424,0.461230994512117,0.452167921657868,0.940709657085638,0,0,0.144599356919912,0,0,0,0,0,89.0053622915103,90.4809773434126,0.255457055208591,0,0,0,60.5154183195484,101.565133825735,38.3245773944236,70.5726739980642,69.5546043938499,56.3105600756408,87.9347645827246,1.2220723662038,0.248813941220186,0.758168275301024,1.68353484709179,0.910843100738926,0.459804208866946,1.26043490863744,1.05493372485001,2.85753296435577,3.20284300712124,3.18585863503078,10.3481348295606,0.215567992932842,0.945530400839096,1.40760899331159,1.53437012699302,1.39023624612799,1.0447564995665,0,0.59710280045548,0,0,0,2.07125772535502,1.40715635988658,3.24111710629827,2.84093682702252,3.93528463494808,3.85667782218446,4.41814495025775,1.07309360559848,2.45207218971056,0.987359099480883,0.164167464079095,0.324275238183423,0.292399974850665,0,0,294.405927989778,63.4921458380185,0,0.264450566663544,0.639864751605702,1.16118335930219,1.9330119198314,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0,1.75934646160189,0.795825888164603,0.58489226135736,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,1.1270773567308,1.01825663922657,1.16371492300575,0.561086559122548,0.252946148497029,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0,0,7.7596339869974,0.37898282354097,0,0.509235257325564,0.469380496577004,0.837531287209079,0.952174563544055,3.31727201358258,2.83743259391144,2.21464689648775,6.05928120898451,19.1720078217413,16.9231282228578,13.3077133894991,0,0,0,0,26.972499117949,21.8013737061498,6.88526770582037,0,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0.668396022247182,1.41538265394416,0.809621403349789,0.584511715822624,0.395287777946524,133.027024998628,1.98716119291576,3.38324646967785,3.74640006513225,4.78413356620353,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0,1.09060118843252,0,0,0,0,9.19186935535228,1.26042765821917,1.03486947026204,0.428674070063185,2.48276327099183,1.78368817602071,1.97458824722545,1.2178597964584,0,0,2.8668691747145,0.16488625294148,0,0.0603129249281559,0,0,0.874442509889552,20.025932617135,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.632671987162271,1.62655573701479,0.756037385752609,1.04544148007234,0.87345025498471,1.48350781023303,1.65306911450672,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0.469428954583016,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,2.62755465631655,4.57879060668163,2.57242054894879,0,45.1801474093653,57.5406545633971,53.2792827498639,42.2758828565471,39.0497036269266,40.7912704590438,64.8021600222534,56.2901504030276,40.3296743995942,35.2077011991238,0.207574695168353,1.19707462020309,4.26834014385335,4.132814190161,1.46729213839588,2.38996560985018,5.55616819504038,3.5025959730612,6.73930340142812,4.54854981174835,6.33698249725599,6.79054828989874,4.96299989590377,5.69823856403337,5.16919220600519,3.81034953026459,3.94006708212509,4.43691207066522,4.12085900803307,4.26876868389752,5.82877729055206,4.43689515398344,5.7224685587357,5.52316383202848,6.7758753899038,6.09225176820071,4.75612729469209,6.83981249738391,6.24698923690964,6.17256498823512,4.62676570684279,2.85662998889134,5.32000356120596,3.71848418846318,4.05103883060397,11.4912865851455,3.97683734357194,3.22306581072447,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1787446105161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,5.71184075109627,18.0819806139084,0.55994568650145,1.43752564364972,0,0,0,0,0,0,10.1158230429799,16.9277113367051,10.775133859605,0.677689064138264,0,0,0,0,0.898800331555214,4.61061966385865,14.101787273953,12.2855403881839,10.5162480675691,9.14083150092171,14.1355866209033,18.4961106814581,15.1435844208813,10.1114066527102,44.0463523997555,49.0319378247121,36.0975353152172,16.0901271030836,17.6571152152651,11.9810075228055,18.9844439320939,48.3975844627245,51.6458077485618,18.8562294703147,19.5049202694771,14.3527573285481,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,2.24711072210803,0,0,0,0.281686839553361,0,0,0,0,0,0,1.48439043634778,0,0,0.867426633830679,0.913396434936424,0.461230994512117,0.452167921657868,0.940709657085638,0,0,0.144599356919912,0,0,0,0,0,89.0053622915103,90.4809773434126,0.255457055208591,0,0,0,60.5154183195484,101.565133825735,38.3245773944236,70.5726739980642,69.5546043938499,56.3105600756408,87.9347645827246,1.2220723662038,0.248813941220186,0.758168275301024,1.68353484709179,0.910843100738926,0.459804208866946,1.26043490863744,1.05493372485001,2.85753296435577,3.20284300712124,3.18585863503078,10.3481348295606,0.215567992932842,0.945530400839096,1.40760899331159,1.53437012699302,1.39023624612799,1.0447564995665,0,0.59710280045548,0,0,0,2.07125772535502,1.40715635988658,3.24111710629827,2.84093682702252,3.93528463494808,3.85667782218446,4.41814495025775,1.07309360559848,2.45207218971056,0.987359099480883,0.164167464079095,0.324275238183423,0.292399974850665,0,0,294.405927989778,63.4921458380185,0,0.264450566663544,0.639864751605702,1.16118335930219,1.9330119198314,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0,1.75934646160189,0.795825888164603,0.58489226135736,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,1.1270773567308,1.01825663922657,1.16371492300575,0.561086559122548,0.252946148497029,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0,0,7.7596339869974,0.37898282354097,0,0.509235257325564,0.469380496577004,0.837531287209079,0.952174563544055,3.31727201358258,2.83743259391144,2.21464689648775,6.05928120898451,19.1720078217413,16.9231282228578,13.3077133894991,0,0,0,0,26.972499117949,21.8013737061498,6.88526770582037,0,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0.668396022247182,1.41538265394416,0.809621403349789,0.584511715822624,0.395287777946524,133.027024998628,1.98716119291576,3.38324646967785,3.74640006513225,4.78413356620353,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0,1.09060118843252,0,0,0,0,9.19186935535228,1.26042765821917,1.03486947026204,0.428674070063185,2.48276327099183,1.78368817602071,1.97458824722545,1.2178597964584,0,0,2.8668691747145,0.16488625294148,0,0.0603129249281559,0,0,0.874442509889552,20.025932617135,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.632671987162271,1.62655573701479,0.756037385752609,1.04544148007234,0.87345025498471,1.48350781023303,1.65306911450672,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0.469428954583016,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,2.62755465631655,4.57879060668163,2.57242054894879,0,45.1801474093653,57.5406545633971,53.2792827498639,42.2758828565471,39.0497036269266,40.7912704590438,64.8021600222534,56.2901504030276,40.3296743995942,35.2077011991238,0.207574695168353,1.19707462020309,4.26834014385335,4.132814190161,1.46729213839588,2.38996560985018,5.55616819504038,3.5025959730612,6.73930340142812,4.54854981174835,6.33698249725599,6.79054828989874,4.96299989590377,5.69823856403337,5.16919220600519,3.81034953026459,3.94006708212509,4.43691207066522,4.12085900803307,4.26876868389752,5.82877729055206,4.43689515398344,5.7224685587357,5.52316383202848,6.7758753899038,6.09225176820071,4.75612729469209,6.83981249738391,6.24698923690964,6.17256498823512,4.62676570684279,2.85662998889134,5.32000356120596,3.71848418846318,4.05103883060397,11.4912865851455,3.97683734357194,3.22306581072447,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p1@Gria1
}}
}}

Latest revision as of 18:01, 1 October 2015

Short description:p1@Gria1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gria1_5end
Coexpression cluster:MCL_coexpression_mm9:362
Association with transcript: 0bp_to_ENSMUST00000036315_5end
EntrezGene:Gria1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gria1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I651.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.35
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B289.01
cerebellum, neonate N30.CNhs11135.1395-42I290.48
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A460.52
corpus striatum, adult.CNhs10487.19-21D8101.57
corpus striatum, neonate N00.CNhs11226.630-43F138.32
cortex, adult.CNhs10473.12-14D570.57
cortex, neonate N30.CNhs11107.1392-42F269.55
diencephalon, adult.CNhs10482.20-12F256.31
diencephalon, neonate N30.CNhs11201.1388-42B287.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8294.41
hippocampus, neonate N00.CNhs11228.627-43G163.49
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H213.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C226.97
medulla oblongata, neonate N30.CNhs11200.1396-42A321.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I9133.03
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C920.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A257.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A664.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.21
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.11e-1523
neuroblast (sensu Vertebrata)2.11e-1523
neuron1.84e-0833
neuronal stem cell1.84e-0833
neuroblast1.84e-0833
electrically signaling cell1.84e-0833
neural cell1.06e-0743
ectodermal cell2.67e-0744
neurectodermal cell2.67e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.11e-3254
neural tube3.61e-3052
neural rod3.61e-3052
future spinal cord3.61e-3052
neural keel3.61e-3052
neurectoderm4.42e-2764
neural plate4.42e-2764
presumptive neural plate4.42e-2764
brain5.74e-2747
future brain5.74e-2747
central nervous system9.61e-2773
regional part of brain5.24e-2646
nervous system2.45e-2575
gray matter8.68e-2534
anterior neural tube2.05e-2340
pre-chordal neural plate1.00e-2249
regional part of forebrain1.53e-2239
forebrain1.53e-2239
future forebrain1.53e-2239
brain grey matter1.25e-2129
regional part of telencephalon1.25e-2129
telencephalon1.25e-2129
ecto-epithelium8.56e-2173
ectoderm-derived structure9.33e-2095
ectoderm9.33e-2095
presumptive ectoderm9.33e-2095
structure with developmental contribution from neural crest7.28e-1892
cerebral cortex7.46e-1621
cerebral hemisphere7.46e-1621
pallium7.46e-1621
regional part of cerebral cortex2.31e-1317
tube4.29e-13114
anatomical conduit1.01e-11122
occipital lobe5.25e-0910
visual cortex5.25e-0910
neocortex5.25e-0910
posterior neural tube3.74e-0712
chordal neural plate3.74e-0712
basal ganglion6.38e-078
nuclear complex of neuraxis6.38e-078
aggregate regional part of brain6.38e-078
collection of basal ganglia6.38e-078
cerebral subcortex6.38e-078
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