FFCP PHASE1:Mm9::chr11:51813858..51813890,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:51813858..51813890,-
|short_description=p2@Ube2b
|description=CAGE_peak_2_at_Ube2b_5end
|association_with_transcript=77bp_to_NM_009458,uc007iut.2_5end
|E...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22210 | |EntrezGene=22210 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2RSE4,P63147,Q3TQ27 | |UniProt=A2RSE4,P63147,Q3TQ27 | ||
|association_with_transcript=77bp_to_NM_009458,uc007iut.2_5end | |||
|cluster_id=chr11:51813858..51813890,- | |||
|description=CAGE_peak_2_at_Ube2b_5end | |||
|id=chr11:51813858..51813890,- | |||
|ontology_enrichment_celltype=CL:0000393!4.54e-14!39;CL:0000211!4.54e-14!39;CL:0000540!1.55e-13!33;CL:0000047!1.55e-13!33;CL:0000031!1.55e-13!33;CL:0000404!1.55e-13!33;CL:0000221!8.28e-11!44;CL:0000133!8.28e-11!44;CL:0000055!1.67e-10!50;CL:0002319!1.85e-10!43;CL:0000117!4.03e-08!23;CL:0000337!4.03e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.54e-14,39;CL:0000211,4.54e-14,39;CL:0000540,1.55e-13,33;CL:0000047,1.55e-13,33;CL:0000031,1.55e-13,33;CL:0000404,1.55e-13,33;CL:0000221,8.28e-11,44;CL:0000133,8.28e-11,44;CL:0002319,1.85e-10,43;CL:0000117,4.03e-08,23;CL:0000337,4.03e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!5.15e-09!43;UBERON:0004535!5.41e-09!23;UBERON:0001009!5.41e-09!23;UBERON:0007100!2.04e-08!18;UBERON:0000948!2.04e-08!18;UBERON:0005498!2.04e-08!18;UBERON:0004140!2.04e-08!18;UBERON:0009881!2.04e-08!18;UBERON:0004141!2.04e-08!18;UBERON:0003084!2.04e-08!18;UBERON:0007005!2.04e-08!18;UBERON:0004139!2.04e-08!18;UBERON:0004291!2.04e-08!18;UBERON:0001017!4.77e-07!73;UBERON:0005743!4.77e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.09e-10,92;UBERON:0003103,5.15e-09,43;UBERON:0004535,5.41e-09,23;UBERON:0001009,5.41e-09,23;UBERON:0007100,2.04e-08,18;UBERON:0000948,2.04e-08,18;UBERON:0005498,2.04e-08,18;UBERON:0004140,2.04e-08,18;UBERON:0009881,2.04e-08,18;UBERON:0004141,2.04e-08,18;UBERON:0003084,2.04e-08,18;UBERON:0007005,2.04e-08,18;UBERON:0004139,2.04e-08,18;UBERON:0004291,2.04e-08,18;UBERON:0001017,4.77e-07,73 | |||
|phase1_expression=56.0520964866779,6.2815573375085,7.27998783023258,5.44435580352294,6.01074875935617,14.9412552001582,11.9142446703718,20.7888550740938,44.0668700334717,44.0041309485348,16.4369249496485,19.1453181588807,15.0656642339461,17.2218192765425,8.66085380720723,9.92128810210147,9.79386629379405,18.7699988388151,21.8011949433125,15.2780274647291,47.9644156452034,37.3333976515329,37.8739694251456,18.7191134668286,15.3704218315004,10.9104073181854,8.61523992318149,10.1271479362368,10.4512880701006,15.3738379153558,14.4124831925948,6.35030673459631,9.84103660135312,15.8481681015439,26.8632006368685,23.6053196409059,22.8669679013853,47.7126059040075,39.8481025707138,34.0290433582969,51.1761394586982,31.4200923080885,30.5871522409627,47.5889971947682,44.2003420117084,53.7791983833727,37.5547845287059,40.9887293995239,34.0513583238431,32.0809333472568,29.8171078062022,30.188038516644,53.0193035142447,63.8318684969983,51.7584450679395,35.7590616089966,34.6705462325896,34.5500301825886,64.5389510142117,70.3558002431804,65.2846345611365,30.1571633541528,17.7858959222228,14.3983954765024,11.8663963508037,7.104801149461,24.8668091730276,21.5162250980071,63.6654219574053,63.1827791392312,65.6213879416312,49.1319693174542,55.438003778855,57.6931664302434,64.2164655822184,79.9720344350718,33.0347642998166,29.6234624357635,32.5645850503236,57.7661940258249,58.3691166183374,75.5324387307302,30.1517638921491,48.9603470727562,36.0603864753272,46.2566879193658,49.9724599604851,62.0710154598251,18.098560206631,25.8454735565206,35.6533321103064,12.0459342777394,38.7583660213418,17.810205324048,19.4932925234301,28.2256938871321,45.5039921226876,23.1785238706159,27.797102492507,25.7937889392548,49.5768837613915,32.0816193535795,28.028576367731,14.2213340630666,58.4525810730278,65.8735650235256,66.7292267419514,30.8296475241462,11.3932668804756,21.2272258862699,30.8803881643722,28.010824004717,20.7553947530453,24.5677904100775,39.039450769054,18.0959891514733,32.382540773203,35.1376437315385,13.2691582792481,65.1920405288059,45.2725112843807,40.2446460102234,5.59175283654366,24.59358694897,19.0596503200244,10.4737392635522,44.9306716897201,43.1929966315254,36.9774360782618,26.213361895844,22.4175295381127,28.1465748732816,18.0777292999968,18.4115129277838,26.8046577481833,27.418773458451,45.2166775495404,32.4702193292343,37.9084137650512,15.993581047372,44.8915528221328,44.8309103645272,41.0541655956196,41.7452345404931,42.1145929746719,45.6084844214065,47.694177800902,26.9051505568576,43.760302565367,52.9497024469894,46.8029990276104,48.0038654016389,43.0973236299677,30.2979384874285,31.0731025975995,38.6126477627877,27.3863143052162,19.3010930336036,22.4489164522518,61.1021028979731,58.396988935293,51.4977495778503,51.1368628864054,54.7004564257783,58.1587015585416,59.9937577456052,59.5566951107155,84.8884039009322,70.9252953127101,87.829593282316,92.9048557395507,102.486191185158,80.7944424271066,96.762827926228,21.2392848049769,42.3967003002652,7.26921322564356,8.99131926656051,40.9513441027649,39.0157608725537,33.118937559778,31.2609463166181,20.9035361214178,18.4518857329182,8.0669940462567,16.6345944271251,20.3581519128218,25.4664284212673,15.4021628824105,8.08937467788799,7.5648317456143,11.5501938487533,43.8132851201619,38.8444942873078,30.4310886317317,39.3047062741457,38.4025924591899,44.255702350791,28.2034955574188,18.3036583494707,19.9388384358546,28.5047448659359,14.8226313543574,11.6791574001266,12.9728936774714,9.89393294493356,8.11440485554012,10.1294407096015,12.9859184408524,17.5494643844994,48.8027032592857,16.4736847912849,30.1913233707445,25.3055844414582,26.2111645416231,17.9331003342449,13.9929982547091,24.1221760681684,27.3434721446575,52.2996296486538,37.1560146287819,40.2295853287196,40.3667227056224,38.5264392116176,29.7554551107517,46.8320754858717,32.9457451181939,43.6285438608087,22.6425771493632,19.1720078217413,19.1680329871144,31.678143829351,15.0791283939272,16.86107619838,4.91764273019036,11.313406598494,25.6880943980467,24.6144541843627,34.2624035837252,117.651452077238,72.8823986851553,81.2112588137008,88.969863263646,60.9370434779008,63.4976221134823,61.9937602427543,78.9380868266044,80.0781050676995,86.5680233702886,27.6336332122754,29.8074178937364,19.0530195923963,43.9794790254655,23.2607873391275,9.2921596837974,46.3711015056015,41.1160037472061,25.838895926558,10.9261700365886,24.9022469834581,29.7192537143454,27.6285634402904,24.9548164869305,16.7499481705982,10.5418608574999,5.15677716240934,42.5549507192235,43.7548458496084,34.1506925186472,50.3692032324242,54.9754724291048,48.3379495701611,45.9091767479918,46.8876021636483,14.0803024838226,33.045803054756,18.7449138346718,20.610781617685,42.788073074415,24.6679862956157,20.4126708245363,16.9065126737413,13.4081184849731,19.655082013114,7.17657699350981,27.2430665711454,18.1490636822317,11.3021074202815,7.10809984149331,7.0921233694022,49.1237662682242,45.7641249098362,47.5407909887218,34.3681422485441,45.2360470821024,38.0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| |phase1_expression=56.0520964866779,6.2815573375085,7.27998783023258,5.44435580352294,6.01074875935617,14.9412552001582,11.9142446703718,20.7888550740938,44.0668700334717,44.0041309485348,16.4369249496485,19.1453181588807,15.0656642339461,17.2218192765425,8.66085380720723,9.92128810210147,9.79386629379405,18.7699988388151,21.8011949433125,15.2780274647291,47.9644156452034,37.3333976515329,37.8739694251456,18.7191134668286,15.3704218315004,10.9104073181854,8.61523992318149,10.1271479362368,10.4512880701006,15.3738379153558,14.4124831925948,6.35030673459631,9.84103660135312,15.8481681015439,26.8632006368685,23.6053196409059,22.8669679013853,47.7126059040075,39.8481025707138,34.0290433582969,51.1761394586982,31.4200923080885,30.5871522409627,47.5889971947682,44.2003420117084,53.7791983833727,37.5547845287059,40.9887293995239,34.0513583238431,32.0809333472568,29.8171078062022,30.188038516644,53.0193035142447,63.8318684969983,51.7584450679395,35.7590616089966,34.6705462325896,34.5500301825886,64.5389510142117,70.3558002431804,65.2846345611365,30.1571633541528,17.7858959222228,14.3983954765024,11.8663963508037,7.104801149461,24.8668091730276,21.5162250980071,63.6654219574053,63.1827791392312,65.6213879416312,49.1319693174542,55.438003778855,57.6931664302434,64.2164655822184,79.9720344350718,33.0347642998166,29.6234624357635,32.5645850503236,57.7661940258249,58.3691166183374,75.5324387307302,30.1517638921491,48.9603470727562,36.0603864753272,46.2566879193658,49.9724599604851,62.0710154598251,18.098560206631,25.8454735565206,35.6533321103064,12.0459342777394,38.7583660213418,17.810205324048,19.4932925234301,28.2256938871321,45.5039921226876,23.1785238706159,27.797102492507,25.7937889392548,49.5768837613915,32.0816193535795,28.028576367731,14.2213340630666,58.4525810730278,65.8735650235256,66.7292267419514,30.8296475241462,11.3932668804756,21.2272258862699,30.8803881643722,28.010824004717,20.7553947530453,24.5677904100775,39.039450769054,18.0959891514733,32.382540773203,35.1376437315385,13.2691582792481,65.1920405288059,45.2725112843807,40.2446460102234,5.59175283654366,24.59358694897,19.0596503200244,10.4737392635522,44.9306716897201,43.1929966315254,36.9774360782618,26.213361895844,22.4175295381127,28.1465748732816,18.0777292999968,18.4115129277838,26.8046577481833,27.418773458451,45.2166775495404,32.4702193292343,37.9084137650512,15.993581047372,44.8915528221328,44.8309103645272,41.0541655956196,41.7452345404931,42.1145929746719,45.6084844214065,47.694177800902,26.9051505568576,43.760302565367,52.9497024469894,46.8029990276104,48.0038654016389,43.0973236299677,30.2979384874285,31.0731025975995,38.6126477627877,27.3863143052162,19.3010930336036,22.4489164522518,61.1021028979731,58.396988935293,51.4977495778503,51.1368628864054,54.7004564257783,58.1587015585416,59.9937577456052,59.5566951107155,84.8884039009322,70.9252953127101,87.829593282316,92.9048557395507,102.486191185158,80.7944424271066,96.762827926228,21.2392848049769,42.3967003002652,7.26921322564356,8.99131926656051,40.9513441027649,39.0157608725537,33.118937559778,31.2609463166181,20.9035361214178,18.4518857329182,8.0669940462567,16.6345944271251,20.3581519128218,25.4664284212673,15.4021628824105,8.08937467788799,7.5648317456143,11.5501938487533,43.8132851201619,38.8444942873078,30.4310886317317,39.3047062741457,38.4025924591899,44.255702350791,28.2034955574188,18.3036583494707,19.9388384358546,28.5047448659359,14.8226313543574,11.6791574001266,12.9728936774714,9.89393294493356,8.11440485554012,10.1294407096015,12.9859184408524,17.5494643844994,48.8027032592857,16.4736847912849,30.1913233707445,25.3055844414582,26.2111645416231,17.9331003342449,13.9929982547091,24.1221760681684,27.3434721446575,52.2996296486538,37.1560146287819,40.2295853287196,40.3667227056224,38.5264392116176,29.7554551107517,46.8320754858717,32.9457451181939,43.6285438608087,22.6425771493632,19.1720078217413,19.1680329871144,31.678143829351,15.0791283939272,16.86107619838,4.91764273019036,11.313406598494,25.6880943980467,24.6144541843627,34.2624035837252,117.651452077238,72.8823986851553,81.2112588137008,88.969863263646,60.9370434779008,63.4976221134823,61.9937602427543,78.9380868266044,80.0781050676995,86.5680233702886,27.6336332122754,29.8074178937364,19.0530195923963,43.9794790254655,23.2607873391275,9.2921596837974,46.3711015056015,41.1160037472061,25.838895926558,10.9261700365886,24.9022469834581,29.7192537143454,27.6285634402904,24.9548164869305,16.7499481705982,10.5418608574999,5.15677716240934,42.5549507192235,43.7548458496084,34.1506925186472,50.3692032324242,54.9754724291048,48.3379495701611,45.9091767479918,46.8876021636483,14.0803024838226,33.045803054756,18.7449138346718,20.610781617685,42.788073074415,24.6679862956157,20.4126708245363,16.9065126737413,13.4081184849731,19.655082013114,7.17657699350981,27.2430665711454,18.1490636822317,11.3021074202815,7.10809984149331,7.0921233694022,49.1237662682242,45.7641249098362,47.5407909887218,34.3681422485441,45.2360470821024,38.0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| ||
|short_description=p2@Ube2b | |||
}} | }} |
Latest revision as of 15:39, 1 October 2015
Short description: | p2@Ube2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ube2b_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_NM_009458, uc007iut.2_5end |
EntrezGene: | Ube2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.54e-14 | 39 |
electrically active cell | 4.54e-14 | 39 |
neuron | 1.55e-13 | 33 |
neuronal stem cell | 1.55e-13 | 33 |
neuroblast | 1.55e-13 | 33 |
electrically signaling cell | 1.55e-13 | 33 |
ectodermal cell | 8.28e-11 | 44 |
neurectodermal cell | 8.28e-11 | 44 |
neural cell | 1.85e-10 | 43 |
CNS neuron (sensu Vertebrata) | 4.03e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.09e-10 | 92 |
compound organ | 5.15e-09 | 43 |
cardiovascular system | 5.41e-09 | 23 |
circulatory system | 5.41e-09 | 23 |
primary circulatory organ | 2.04e-08 | 18 |
heart | 2.04e-08 | 18 |
primitive heart tube | 2.04e-08 | 18 |
primary heart field | 2.04e-08 | 18 |
anterior lateral plate mesoderm | 2.04e-08 | 18 |
heart tube | 2.04e-08 | 18 |
heart primordium | 2.04e-08 | 18 |
cardiac mesoderm | 2.04e-08 | 18 |
cardiogenic plate | 2.04e-08 | 18 |
heart rudiment | 2.04e-08 | 18 |
central nervous system | 4.77e-07 | 73 |