FFCP PHASE1:Mm9::chrX:98494482..98494540,+: Difference between revisions
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{{FFCP|EntrezGene=245537|HGNC=|MCL_coexpression_id=1|UniProt=A2AGI3,A2AGI0,A2AGI2,Q8BYM5|association_with_transcript=0bp_to_ENSMUST00000118111,ENSMUST00000130555,ENSMUST00000151528,NM_172932,uc009txj.2_5end|description=CAGE_peak_1_at_Nlgn3_5end|id=chrX:98494482..98494540,+|ontology_enrichment_celltype=CL:0000221!2.29e-18!44;CL:0000133!2.29e-18!44;CL:0002319!5.72e-18!43;CL:0000540!6.90e-16!33;CL:0000047!6.90e-16!33;CL:0000031!6.90e-16!33;CL:0000404!6.90e-16!33;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000055!3.29e-13!50;CL:0000393!2.35e-11!39;CL:0000211!2.35e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,8.56e-19,44;CL:0000133,8.56e-19,44;CL:0002319,2.22e-18,43;CL:0000540,1.95e-16,33;CL:0000047,1.95e-16,33;CL:0000031,1.95e-16,33;CL:0000404,1.95e-16,33;CL:0000117,3.68e-14,23;CL:0000337,3.68e-14,23;CL:0000393,1.23e-11,39;CL:0000211,1.23e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.97e-38!73;UBERON:0005743!2.97e-38!73;UBERON:0000073!5.24e-37!75;UBERON:0001016!5.24e-37!75;UBERON:0004121!1.20e-35!102;UBERON:0000924!1.20e-35!102;UBERON:0006601!1.20e-35!102;UBERON:0002346!5.45e-31!71;UBERON:0003075!5.45e-31!71;UBERON:0007284!5.45e-31!71;UBERON:0001049!2.49e-28!52;UBERON:0005068!2.49e-28!52;UBERON:0006241!2.49e-28!52;UBERON:0007135!2.49e-28!52;UBERON:0000033!5.77e-27!63;UBERON:0000955!1.08e-26!50;UBERON:0006238!1.08e-26!50;UBERON:0002616!4.83e-26!49;UBERON:0003056!1.41e-22!49;UBERON:0003080!1.80e-21!40;UBERON:0002020!4.15e-21!34;UBERON:0002780!6.86e-21!39;UBERON:0001890!6.86e-21!39;UBERON:0006240!6.86e-21!39;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0000956!3.39e-13!21;UBERON:0001869!3.39e-13!21;UBERON:0000203!3.39e-13!21;UBERON:0000153!7.94e-13!94;UBERON:0007811!1.46e-11!86;UBERON:0002619!2.46e-11!17;UBERON:0000468!1.79e-09!333;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000025!2.09e-07!114;UBERON:0003076!2.70e-07!12;UBERON:0003057!2.70e-07!12;UBERON:0000479!5.89e-07!349;UBERON:0004111!7.80e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-39,73;UBERON:0001016,4.05e-38,75;UBERON:0004121,1.47e-34,95;UBERON:0000924,1.47e-34,95;UBERON:0006601,1.47e-34,95;UBERON:0002346,2.21e-31,64;UBERON:0003075,2.21e-31,64;UBERON:0007284,2.21e-31,64;UBERON:0000073,8.81e-31,54;UBERON:0001049,2.33e-29,52;UBERON:0005068,2.33e-29,52;UBERON:0006241,2.33e-29,52;UBERON:0007135,2.33e-29,52;UBERON:0010371,2.59e-28,73;UBERON:0000955,1.02e-25,47;UBERON:0006238,1.02e-25,47;UBERON:0002616,4.72e-25,46;UBERON:0010314,1.52e-24,92;UBERON:0003056,2.20e-23,49;UBERON:0003080,3.09e-22,40;UBERON:0002020,7.38e-22,34;UBERON:0002780,1.24e-21,39;UBERON:0001890,1.24e-21,39;UBERON:0006240,1.24e-21,39;UBERON:0003528,2.44e-18,29;UBERON:0002791,2.44e-18,29;UBERON:0001893,2.44e-18,29;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0002619,1.04e-11,17;UBERON:0002021,2.21e-08,10;UBERON:0000411,2.21e-08,10;UBERON:0001950,2.21e-08,10;UBERON:0003076,1.62e-07,12;UBERON:0003057,1.62e-07,12|phase1_expression=15.0539916278506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.750562796861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0,14.0830441982647,37.9363772101977,39.5435128922049,34.8029519342967,20.4380175573029,41.6882436658418,0,0,0,0,1.71920063963254,1.03134418455488,90.4354580042402,107.914159771495,98.8776989469639,2.37191172448392,2.66788438833342,0,0,0,40.1464148094662,84.9122454760636,48.0082904988252,44.4169537111262,47.9540911881151,120.544715418405,126.999411047178,53.8959516545798,54.4402275383583,57.9107835564313,85.8903871795232,96.9146896066575,90.7814611544399,110.520709117902,102.466160834699,91.6807532179897,72.3083967413577,77.6612401843718,89.9981679405412,136.413035074308,116.175291532068,87.0485412004154,0.302904773332736,2.94729084416464,0.869593466105033,0.860423876981386,0,0,0,0,4.21333260395256,0,0,0,24.3659116213657,0,0,0,0,0,0,2.74041311325744,0.258937883647172,14.6957717674177,11.2765462397988,9.74289530598852,14.2981608298756,8.13902258984162,8.93674174231356,8.92232798440696,0.494389935468748,3.32578520915797,1.76922110389975,4.36770494858005,0.441683036920787,0.969750506270444,1.86391761218122,72.3168568618521,77.9141749346053,0,0,0,0,88.5262678882502,109.342644073652,87.4554290705536,105.511362356712,115.327671255979,88.1021308932535,93.7754500531639,5.80484373946803,0.870848794270651,0.252722758433675,7.15502310014011,8.19758790665033,7.81667155073808,12.7844112161798,12.8099095160358,15.3762488082001,14.2206229516183,16.8663104207512,20.9549730298603,9.26942369611222,18.1541836961106,24.6331573829528,16.4396799320681,15.2925987074079,10.0993128291428,8.23128545631774,1.39323986772945,0,0,0,1.86413195281952,4.22146907965973,1.98068267607116,3.55117103377815,2.16440654922144,2.62254091908543,1.86027155800326,1.60964040839772,0.934122738937356,1.48103864922132,2.46251196118643,1.2160321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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245537 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AGI3,A2AGI0,A2AGI2,Q8BYM5 | |||
|association_with_transcript=0bp_to_ENSMUST00000118111,ENSMUST00000130555,ENSMUST00000151528,NM_172932,uc009txj.2_5end | |||
|cluster_id=chrX:98494482..98494540,+ | |||
|description=CAGE_peak_1_at_Nlgn3_5end | |||
|id=chrX:98494482..98494540,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.29e-18!44;CL:0000133!2.29e-18!44;CL:0002319!5.72e-18!43;CL:0000540!6.90e-16!33;CL:0000047!6.90e-16!33;CL:0000031!6.90e-16!33;CL:0000404!6.90e-16!33;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000055!3.29e-13!50;CL:0000393!2.35e-11!39;CL:0000211!2.35e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.56e-19,44;CL:0000133,8.56e-19,44;CL:0002319,2.22e-18,43;CL:0000540,1.95e-16,33;CL:0000047,1.95e-16,33;CL:0000031,1.95e-16,33;CL:0000404,1.95e-16,33;CL:0000117,3.68e-14,23;CL:0000337,3.68e-14,23;CL:0000393,1.23e-11,39;CL:0000211,1.23e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-38!73;UBERON:0005743!2.97e-38!73;UBERON:0000073!5.24e-37!75;UBERON:0001016!5.24e-37!75;UBERON:0004121!1.20e-35!102;UBERON:0000924!1.20e-35!102;UBERON:0006601!1.20e-35!102;UBERON:0002346!5.45e-31!71;UBERON:0003075!5.45e-31!71;UBERON:0007284!5.45e-31!71;UBERON:0001049!2.49e-28!52;UBERON:0005068!2.49e-28!52;UBERON:0006241!2.49e-28!52;UBERON:0007135!2.49e-28!52;UBERON:0000033!5.77e-27!63;UBERON:0000955!1.08e-26!50;UBERON:0006238!1.08e-26!50;UBERON:0002616!4.83e-26!49;UBERON:0003056!1.41e-22!49;UBERON:0003080!1.80e-21!40;UBERON:0002020!4.15e-21!34;UBERON:0002780!6.86e-21!39;UBERON:0001890!6.86e-21!39;UBERON:0006240!6.86e-21!39;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0000956!3.39e-13!21;UBERON:0001869!3.39e-13!21;UBERON:0000203!3.39e-13!21;UBERON:0000153!7.94e-13!94;UBERON:0007811!1.46e-11!86;UBERON:0002619!2.46e-11!17;UBERON:0000468!1.79e-09!333;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000025!2.09e-07!114;UBERON:0003076!2.70e-07!12;UBERON:0003057!2.70e-07!12;UBERON:0000479!5.89e-07!349;UBERON:0004111!7.80e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-39,73;UBERON:0001016,4.05e-38,75;UBERON:0004121,1.47e-34,95;UBERON:0000924,1.47e-34,95;UBERON:0006601,1.47e-34,95;UBERON:0002346,2.21e-31,64;UBERON:0003075,2.21e-31,64;UBERON:0007284,2.21e-31,64;UBERON:0000073,8.81e-31,54;UBERON:0001049,2.33e-29,52;UBERON:0005068,2.33e-29,52;UBERON:0006241,2.33e-29,52;UBERON:0007135,2.33e-29,52;UBERON:0010371,2.59e-28,73;UBERON:0000955,1.02e-25,47;UBERON:0006238,1.02e-25,47;UBERON:0002616,4.72e-25,46;UBERON:0010314,1.52e-24,92;UBERON:0003056,2.20e-23,49;UBERON:0003080,3.09e-22,40;UBERON:0002020,7.38e-22,34;UBERON:0002780,1.24e-21,39;UBERON:0001890,1.24e-21,39;UBERON:0006240,1.24e-21,39;UBERON:0003528,2.44e-18,29;UBERON:0002791,2.44e-18,29;UBERON:0001893,2.44e-18,29;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0002619,1.04e-11,17;UBERON:0002021,2.21e-08,10;UBERON:0000411,2.21e-08,10;UBERON:0001950,2.21e-08,10;UBERON:0003076,1.62e-07,12;UBERON:0003057,1.62e-07,12 | |||
|phase1_expression=15.0539916278506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.750562796861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0,14.0830441982647,37.9363772101977,39.5435128922049,34.8029519342967,20.4380175573029,41.6882436658418,0,0,0,0,1.71920063963254,1.03134418455488,90.4354580042402,107.914159771495,98.8776989469639,2.37191172448392,2.66788438833342,0,0,0,40.1464148094662,84.9122454760636,48.0082904988252,44.4169537111262,47.9540911881151,120.544715418405,126.999411047178,53.8959516545798,54.4402275383583,57.9107835564313,85.8903871795232,96.9146896066575,90.7814611544399,110.520709117902,102.466160834699,91.6807532179897,72.3083967413577,77.6612401843718,89.9981679405412,136.413035074308,116.175291532068,87.0485412004154,0.302904773332736,2.94729084416464,0.869593466105033,0.860423876981386,0,0,0,0,4.21333260395256,0,0,0,24.3659116213657,0,0,0,0,0,0,2.74041311325744,0.258937883647172,14.6957717674177,11.2765462397988,9.74289530598852,14.2981608298756,8.13902258984162,8.93674174231356,8.92232798440696,0.494389935468748,3.32578520915797,1.76922110389975,4.36770494858005,0.441683036920787,0.969750506270444,1.86391761218122,72.3168568618521,77.9141749346053,0,0,0,0,88.5262678882502,109.342644073652,87.4554290705536,105.511362356712,115.327671255979,88.1021308932535,93.7754500531639,5.80484373946803,0.870848794270651,0.252722758433675,7.15502310014011,8.19758790665033,7.81667155073808,12.7844112161798,12.8099095160358,15.3762488082001,14.2206229516183,16.8663104207512,20.9549730298603,9.26942369611222,18.1541836961106,24.6331573829528,16.4396799320681,15.2925987074079,10.0993128291428,8.23128545631774,1.39323986772945,0,0,0,1.86413195281952,4.22146907965973,1.98068267607116,3.55117103377815,2.16440654922144,2.62254091908543,1.86027155800326,1.60964040839772,0.934122738937356,1.48103864922132,2.46251196118643,1.21603214318784,1.75439984910399,0.658650345873152,1.20785776884335,123.019619910014,91.4822004051839,0,0.264450566663544,5.75878276445132,6.27039014023184,5.54130083685001,4.63872106633688,3.7804267453628,4.94586627892654,1.42358718463353,3.95277491337626,3.01602250560323,2.98434708061726,2.14460495831032,0.898819408654221,1.29682829924817,0.597423819763102,5.69003702859245,6.28366819353509,5.63538678365402,5.29493452397817,2.90928730751439,2.94570443539338,2.84564417059158,0.885660887877613,0.31399745568275,0.616985819609003,0.296452627087149,0.83422552858047,0.196558995113203,0.899448449539415,0,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,1.11642284300551,0.936113019343682,0.505157755894224,0,0.482443521363367,0.923765950833023,7.20067364727842,13.0371981153621,6.95954851678271,5.63256595892405,3.85264392116176,2.14239276797412,1.17080188714679,4.09851374676097,2.87904096543407,2.39182152986231,1.47476983244164,0.518054945597687,0.578596234326046,0,0,0.983528546038072,0.551873492609465,51.8578405660568,69.0376834028077,0,1.00988370881749,12.9358369960665,9.76096860741596,26.9279247165999,27.0034741686384,29.6322236529584,36.7999490025482,10.1202675418724,14.3205370376543,18.1832377855401,93.5045030787459,1.98716119291576,4.98583690268315,4.72372182125371,3.95928295134085,1.32745138339963,2.91336763385978,0.906970670894253,1.88605079755898,2.36241514304618,3.3817866273832,1.55056975900933,1.09060118843252,3.20847640546249,2.84433082142234,1.05418608574999,4.12542172992747,24.1712120085189,16.0254373687866,14.746889951234,15.0035924522115,17.2020026633005,13.5560301377574,17.9358432456312,21.312546438022,0,0.21183207086382,1.7642271844397,2.63818004706368,3.87514624070173,3.61877549568935,2.26807453605959,1.47726809770555,1.45740418314925,59.1506713413526,0,3.30218988741156,1.85194527369712,0.753473828018764,0.136694227721025,0,0,0,0,0.954670618015114,8.06656783631895,8.53941761932765,5.18425635944646,6.89991376847747,4.80397640241591,4.5853877770839,5.37247462214684,3.66458318777641,1.42576470620972,0,0,3.88743019714345,3.97100377097034,7.00024278038572,6.32883135040882,6.42033276864957,4.69428954583016,4.9477666240701,1.8874681996628,0.724752362478018,0,0,2.43270258348197,2.2596410576262,0.389762468933385,0.537080087002444,0.79472541912506,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0.192423683280659,0,1.81384306892169,0,0,0,2.70465431645067,0,2.01466786693992,1.07184189539533,0,164.342786201566,172.161638453684,179.316295706531,118.063136270113,118.519275920321,123.884599171911,141.079702548447,124.288652089885,110.566747792146,115.978309832408,6.53860289780313,27.1336913912701,19.4636310559713,20.4209642337367,16.1402135223546,15.0751676929012,12.8903102124937,17.1009097508282,14.7622836412235,13.8983466470089,14.4483200937437,16.9763707247469,12.5479620009642,15.173961119954,15.5650120869712,15.7176918123414,15.0649623728312,17.3618298417335,10.714233420886,12.953504971827,12.6861623382604,13.4881612681096,15.7367885365232,15.2613737463945,12.4224382148236,14.4690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| |||
|short_description=p1@Nlgn3 | |||
}} |
Latest revision as of 00:58, 2 October 2015
Short description: | p1@Nlgn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlgn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000118111, ENSMUST00000130555, ENSMUST00000151528, NM_172932, uc009txj.2_5end |
EntrezGene: | Nlgn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.56e-19 | 44 |
neurectodermal cell | 8.56e-19 | 44 |
neural cell | 2.22e-18 | 43 |
neuron | 1.95e-16 | 33 |
neuronal stem cell | 1.95e-16 | 33 |
neuroblast | 1.95e-16 | 33 |
electrically signaling cell | 1.95e-16 | 33 |
CNS neuron (sensu Vertebrata) | 3.68e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.68e-14 | 23 |
electrically responsive cell | 1.23e-11 | 39 |
electrically active cell | 1.23e-11 | 39 |