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FFCP PHASE1:Mm9::chrX:55284180..55284195,+: Difference between revisions

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{{FFCP|EntrezGene=22773|HGNC=|MCL_coexpression_id=427|UniProt=A2AWK3|association_with_transcript=0bp_to_ENSMUST00000088629_5end|description=CAGE_peak_2_at_Zic3_5end|id=chrX:55284180..55284195,+|ontology_enrichment_celltype=CL:0000117!7.63e-15!23;CL:0000337!7.63e-15!23;CL:0002319!1.01e-11!43;CL:0000221!3.42e-11!44;CL:0000133!3.42e-11!44;CL:0000055!3.24e-09!50;CL:0000540!9.29e-08!33;CL:0000047!9.29e-08!33;CL:0000031!9.29e-08!33;CL:0000404!9.29e-08!33;CL:0002453!1.84e-07!8;CL:0000128!4.17e-07!6;CL:0000126!4.17e-07!6;CL:0000127!4.17e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-16,23;CL:0000337,4.94e-16,23;CL:0002319,7.48e-14,43;CL:0000221,2.64e-13,44;CL:0000133,2.64e-13,44;CL:0000540,5.69e-09,33;CL:0000047,5.69e-09,33;CL:0000031,5.69e-09,33;CL:0000404,5.69e-09,33;CL:0002453,1.52e-08,8;CL:0000128,3.99e-08,6;CL:0000126,3.99e-08,6;CL:0000127,3.99e-08,6;CL:0000393,2.93e-07,39;CL:0000211,2.93e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.00e-24!52;UBERON:0005068!6.00e-24!52;UBERON:0006241!6.00e-24!52;UBERON:0007135!6.00e-24!52;UBERON:0001017!7.46e-24!73;UBERON:0005743!7.46e-24!73;UBERON:0000073!1.28e-22!75;UBERON:0001016!1.28e-22!75;UBERON:0000955!2.10e-21!50;UBERON:0006238!2.10e-21!50;UBERON:0000033!2.42e-21!63;UBERON:0004121!6.25e-21!102;UBERON:0000924!6.25e-21!102;UBERON:0006601!6.25e-21!102;UBERON:0002616!1.59e-20!49;UBERON:0002346!5.41e-20!71;UBERON:0003075!5.41e-20!71;UBERON:0007284!5.41e-20!71;UBERON:0003056!2.20e-18!49;UBERON:0003080!8.18e-16!40;UBERON:0002780!3.13e-15!39;UBERON:0001890!3.13e-15!39;UBERON:0006240!3.13e-15!39;UBERON:0002020!8.79e-15!34;UBERON:0000153!1.63e-13!94;UBERON:0002791!2.80e-11!29;UBERON:0003528!2.80e-11!29;UBERON:0001893!2.80e-11!29;UBERON:0007811!1.01e-10!86;UBERON:0003076!4.95e-09!12;UBERON:0003057!4.95e-09!12;UBERON:0000956!1.94e-07!21;UBERON:0001869!1.94e-07!21;UBERON:0000203!1.94e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.74e-25,73;UBERON:0000073,4.86e-24,54;UBERON:0001016,8.10e-24,75;UBERON:0001049,1.72e-23,52;UBERON:0005068,1.72e-23,52;UBERON:0006241,1.72e-23,52;UBERON:0007135,1.72e-23,52;UBERON:0004121,8.49e-20,95;UBERON:0000924,8.49e-20,95;UBERON:0006601,8.49e-20,95;UBERON:0000955,1.30e-19,47;UBERON:0006238,1.30e-19,47;UBERON:0002346,1.37e-19,64;UBERON:0003075,1.37e-19,64;UBERON:0007284,1.37e-19,64;UBERON:0002616,1.20e-18,46;UBERON:0010371,2.10e-17,73;UBERON:0003080,2.06e-14,40;UBERON:0002780,9.05e-14,39;UBERON:0001890,9.05e-14,39;UBERON:0006240,9.05e-14,39;UBERON:0002020,9.39e-14,34;UBERON:0003056,8.84e-13,49;UBERON:0003076,2.12e-10,12;UBERON:0003057,2.12e-10,12;UBERON:0003528,6.39e-10,29;UBERON:0002791,6.39e-10,29;UBERON:0001893,6.39e-10,29;UBERON:0010314,7.09e-10,92;UBERON:0000956,2.87e-07,21;UBERON:0001869,2.87e-07,21;UBERON:0000203,2.87e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.4517440104608,15.6978112593922,43.4978641814254,48.8019046676451,9.09911740564856,66.1261796078869,0,0,0,0,0,1.54701627683233,5.05791152148994,6.34789175126439,10.775133859605,9.14880236586657,7.11435836888911,0,0,0,1.49800055259202,1.92109152660777,5.18448061542388,4.3201900266141,4.20649922702764,3.14216082844184,5.74258206474195,2.20483438586917,2.87536413054709,2.75765635983006,1.10115880999389,1.0214987046815,1.84327839907492,6.72620067423989,6.22115976496386,5.73004707612436,1.11673199600552,2.8138130501584,0.916789486660861,5.89257170947335,4.55589378557129,6.33758115806022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,4.9772735491963,3.97948742945565,0,0,0,0,3.14560342750128,0.915001205637253,3.14135880282161,1.21677024134594,0.511430914660661,3.53239675751252,2.43361894601636,0,0,0,0.631325567659422,4.68433594665733,2.06911893990126,1.62055916824814,0.452114453507145,0.612328492361951,0.768682321709099,0.749613796477831,0.776110112217047,5.17363183038821,2.83659120251729,4.04687585577082,3.5071317188412,2.50242524303038,2.089512999133,1.23469281844766,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,2.3131894342054,6.38008596751563,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04171063287669,6.20921682157222,4.71541477069503,3.54680467284547,1.96205699362278,1.97458824722545,0.304464949114599,0.704015124191131,6.99045833850607,0,0.32977250588296,3.55221738730992,2.53314284698255,0.835606408021955,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.34570784914214,0.335769232728157,0,0,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,4.29632955859219,0,0,0.675022500231806,0.900642406448441,0,0,4.8780053364563,6.3843979744165,4.09760653809922,3.40349403895612,3.14419743941973,2.20612210140017,2.00022055021454,1.85431551515005,5.13470735346904,1.76888048234658,2.5347929989024,1.13175804831646,2.43467919421694,2.4969809437899,1.49332219284595,3.81034953026459,1.50649623728312,1.35036454324594,1.23625770240992,2.64958056241915,2.05721551431249,1.4198064492747,1.1921809497366,2.32554266611726,1.50575008664529,2.5384382367503,2.56099162021882,3.41990624869196,0.950628796921032,3.92799590160417,2.01679530811096,1.77308068276014,0.409231043169689,2.32405261778949,2.50778594275484,3.49734809113124,2.57324769289949,0.644613162144895,0.382576664137687,0,0.231867835620421|short_description=p2@Zic3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22773
|HGNC=
|MCL_coexpression_id=427
|TSSclassifier=NA
|UniProt=A2AWK3
|association_with_transcript=0bp_to_ENSMUST00000088629_5end
|cluster_id=chrX:55284180..55284195,+
|description=CAGE_peak_2_at_Zic3_5end
|id=chrX:55284180..55284195,+
|ontology_enrichment_celltype=CL:0000117!7.63e-15!23;CL:0000337!7.63e-15!23;CL:0002319!1.01e-11!43;CL:0000221!3.42e-11!44;CL:0000133!3.42e-11!44;CL:0000055!3.24e-09!50;CL:0000540!9.29e-08!33;CL:0000047!9.29e-08!33;CL:0000031!9.29e-08!33;CL:0000404!9.29e-08!33;CL:0002453!1.84e-07!8;CL:0000128!4.17e-07!6;CL:0000126!4.17e-07!6;CL:0000127!4.17e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-16,23;CL:0000337,4.94e-16,23;CL:0002319,7.48e-14,43;CL:0000221,2.64e-13,44;CL:0000133,2.64e-13,44;CL:0000540,5.69e-09,33;CL:0000047,5.69e-09,33;CL:0000031,5.69e-09,33;CL:0000404,5.69e-09,33;CL:0002453,1.52e-08,8;CL:0000128,3.99e-08,6;CL:0000126,3.99e-08,6;CL:0000127,3.99e-08,6;CL:0000393,2.93e-07,39;CL:0000211,2.93e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.00e-24!52;UBERON:0005068!6.00e-24!52;UBERON:0006241!6.00e-24!52;UBERON:0007135!6.00e-24!52;UBERON:0001017!7.46e-24!73;UBERON:0005743!7.46e-24!73;UBERON:0000073!1.28e-22!75;UBERON:0001016!1.28e-22!75;UBERON:0000955!2.10e-21!50;UBERON:0006238!2.10e-21!50;UBERON:0000033!2.42e-21!63;UBERON:0004121!6.25e-21!102;UBERON:0000924!6.25e-21!102;UBERON:0006601!6.25e-21!102;UBERON:0002616!1.59e-20!49;UBERON:0002346!5.41e-20!71;UBERON:0003075!5.41e-20!71;UBERON:0007284!5.41e-20!71;UBERON:0003056!2.20e-18!49;UBERON:0003080!8.18e-16!40;UBERON:0002780!3.13e-15!39;UBERON:0001890!3.13e-15!39;UBERON:0006240!3.13e-15!39;UBERON:0002020!8.79e-15!34;UBERON:0000153!1.63e-13!94;UBERON:0002791!2.80e-11!29;UBERON:0003528!2.80e-11!29;UBERON:0001893!2.80e-11!29;UBERON:0007811!1.01e-10!86;UBERON:0003076!4.95e-09!12;UBERON:0003057!4.95e-09!12;UBERON:0000956!1.94e-07!21;UBERON:0001869!1.94e-07!21;UBERON:0000203!1.94e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.74e-25,73;UBERON:0000073,4.86e-24,54;UBERON:0001016,8.10e-24,75;UBERON:0001049,1.72e-23,52;UBERON:0005068,1.72e-23,52;UBERON:0006241,1.72e-23,52;UBERON:0007135,1.72e-23,52;UBERON:0004121,8.49e-20,95;UBERON:0000924,8.49e-20,95;UBERON:0006601,8.49e-20,95;UBERON:0000955,1.30e-19,47;UBERON:0006238,1.30e-19,47;UBERON:0002346,1.37e-19,64;UBERON:0003075,1.37e-19,64;UBERON:0007284,1.37e-19,64;UBERON:0002616,1.20e-18,46;UBERON:0010371,2.10e-17,73;UBERON:0003080,2.06e-14,40;UBERON:0002780,9.05e-14,39;UBERON:0001890,9.05e-14,39;UBERON:0006240,9.05e-14,39;UBERON:0002020,9.39e-14,34;UBERON:0003056,8.84e-13,49;UBERON:0003076,2.12e-10,12;UBERON:0003057,2.12e-10,12;UBERON:0003528,6.39e-10,29;UBERON:0002791,6.39e-10,29;UBERON:0001893,6.39e-10,29;UBERON:0010314,7.09e-10,92;UBERON:0000956,2.87e-07,21;UBERON:0001869,2.87e-07,21;UBERON:0000203,2.87e-07,21
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.4517440104608,15.6978112593922,43.4978641814254,48.8019046676451,9.09911740564856,66.1261796078869,0,0,0,0,0,1.54701627683233,5.05791152148994,6.34789175126439,10.775133859605,9.14880236586657,7.11435836888911,0,0,0,1.49800055259202,1.92109152660777,5.18448061542388,4.3201900266141,4.20649922702764,3.14216082844184,5.74258206474195,2.20483438586917,2.87536413054709,2.75765635983006,1.10115880999389,1.0214987046815,1.84327839907492,6.72620067423989,6.22115976496386,5.73004707612436,1.11673199600552,2.8138130501584,0.916789486660861,5.89257170947335,4.55589378557129,6.33758115806022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,4.9772735491963,3.97948742945565,0,0,0,0,3.14560342750128,0.915001205637253,3.14135880282161,1.21677024134594,0.511430914660661,3.53239675751252,2.43361894601636,0,0,0,0.631325567659422,4.68433594665733,2.06911893990126,1.62055916824814,0.452114453507145,0.612328492361951,0.768682321709099,0.749613796477831,0.776110112217047,5.17363183038821,2.83659120251729,4.04687585577082,3.5071317188412,2.50242524303038,2.089512999133,1.23469281844766,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,2.3131894342054,6.38008596751563,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04171063287669,6.20921682157222,4.71541477069503,3.54680467284547,1.96205699362278,1.97458824722545,0.304464949114599,0.704015124191131,6.99045833850607,0,0.32977250588296,3.55221738730992,2.53314284698255,0.835606408021955,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.34570784914214,0.335769232728157,0,0,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,4.29632955859219,0,0,0.675022500231806,0.900642406448441,0,0,4.8780053364563,6.3843979744165,4.09760653809922,3.40349403895612,3.14419743941973,2.20612210140017,2.00022055021454,1.85431551515005,5.13470735346904,1.76888048234658,2.5347929989024,1.13175804831646,2.43467919421694,2.4969809437899,1.49332219284595,3.81034953026459,1.50649623728312,1.35036454324594,1.23625770240992,2.64958056241915,2.05721551431249,1.4198064492747,1.1921809497366,2.32554266611726,1.50575008664529,2.5384382367503,2.56099162021882,3.41990624869196,0.950628796921032,3.92799590160417,2.01679530811096,1.77308068276014,0.409231043169689,2.32405261778949,2.50778594275484,3.49734809113124,2.57324769289949,0.644613162144895,0.382576664137687,0,0.231867835620421
|short_description=p2@Zic3
}}

Latest revision as of 22:23, 1 October 2015

Short description:p2@Zic3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zic3_5end
Coexpression cluster:MCL_coexpression_mm9:427
Association with transcript: 0bp_to_ENSMUST00000088629_5end
EntrezGene:Zic3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zic3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B795.45
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B843.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C348.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C466.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system5.74e-2573
regional part of nervous system4.86e-2454
nervous system8.10e-2475
neural tube1.72e-2352
neural rod1.72e-2352
future spinal cord1.72e-2352
neural keel1.72e-2352
ectoderm-derived structure8.49e-2095
ectoderm8.49e-2095
presumptive ectoderm8.49e-2095
brain1.30e-1947
future brain1.30e-1947
neurectoderm1.37e-1964
neural plate1.37e-1964
presumptive neural plate1.37e-1964
regional part of brain1.20e-1846
ecto-epithelium2.10e-1773
anterior neural tube2.06e-1440
regional part of forebrain9.05e-1439
forebrain9.05e-1439
future forebrain9.05e-1439
gray matter9.39e-1434
pre-chordal neural plate8.84e-1349
posterior neural tube2.12e-1012
chordal neural plate2.12e-1012
brain grey matter6.39e-1029
regional part of telencephalon6.39e-1029
telencephalon6.39e-1029
structure with developmental contribution from neural crest7.09e-1092
cerebral cortex2.87e-0721
cerebral hemisphere2.87e-0721
pallium2.87e-0721
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