FFCP PHASE1:Mm9::chrX:38754566..38754604,+: Difference between revisions
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{{FFCP|EntrezGene=53623|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000156721_5end|description=CAGE_peak_2_at_Gria3_5end|id=chrX:38754566..38754604,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.21e-10!73;UBERON:0005743!1.21e-10!73;UBERON:0000073!6.42e-10!75;UBERON:0001016!6.42e-10!75;UBERON:0000955!4.23e-08!50;UBERON:0006238!4.23e-08!50;UBERON:0004121!6.86e-08!102;UBERON:0000924!6.86e-08!102;UBERON:0006601!6.86e-08!102;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0002616!1.28e-07!49;UBERON:0001049!1.69e-07!52;UBERON:0005068!1.69e-07!52;UBERON:0006241!1.69e-07!52;UBERON:0007135!1.69e-07!52;UBERON:0002346!2.95e-07!71;UBERON:0003075!2.95e-07!71;UBERON:0007284!2.95e-07!71;UBERON:0000033!6.19e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.16e-10,73;UBERON:0001016,2.61e-09,75;UBERON:0002021,4.55e-08,10;UBERON:0000411,4.55e-08,10;UBERON:0001950,4.55e-08,10;UBERON:0000073,6.60e-08,54;UBERON:0001049,2.32e-07,52;UBERON:0005068,2.32e-07,52;UBERON:0006241,2.32e-07,52;UBERON:0007135,2.32e-07,52;UBERON:0000955,5.33e-07,47;UBERON:0006238,5.33e-07,47|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.55129870453209,6.056748023254,11.7539905112521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0,0,0,3.65100772129174,4.05507724878058,4.22157529971868,1.56478268869608,0.65407546914134,1.75748946187577,2.13872888981712,0.55994568650145,1.43752564364972,0,0,2.35265659399725,3.08711323243136,2.29226751951005,6.70373719960675,0.809265843438391,0,0.633831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.768436610643109,1.34796496001021,0.810035629990144,0.841299845405528,1.42825492201902,1.32521124570968,1.34739879136449,0.383381884072945,0,2.20231761998777,6.51205424234457,5.83704826373725,1.31886287730194,0.640413505216868,1.04182674111352,2.79182999001381,3.93933827022176,5.04234217663473,3.53554302568401,4.55589378557129,1.86399445825301,0.227178579999552,0.982430281388212,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0,1.12355536105401,4.60161870960756,1.55871602761721,2.47337702157238,5.21120653173718,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.91347103775248,2.84831672011889,3.71105347662062,1.73485326766136,0.608930956624282,2.30615497256059,1.20578112442098,1.52865319276416,1.88499886994513,0.988779870937496,0.86759614151947,0.884610551949874,2.10296904931632,2.20841518460394,2.42437626567611,0,3.51336956413857,6.91174132484402,0.255457055208591,10.6635460810269,2.39961092397363,11.3092502095028,8.38827580667007,5.49000723382352,2.01046963380583,14.7750672163435,16.3657892691412,4.77912502486988,10.058958310201,5.09196819251581,1.49288364732112,0.252722758433675,0.631325567659422,0.390361328888111,0.689706313300419,0.900310649026746,1.80845781402858,0.95251098811859,1.7935920839879,1.68663104207512,2.84573707812917,0,0.756424320671277,0.703804496655795,1.53437012699302,2.22437799380478,1.39300866608867,1.23469281844766,3.78165106955137,4.91549231119264,3.08817488537658,5.39910648851626,2.07125772535502,2.57978665979206,1.98068267607116,1.42046841351126,2.75469924446365,2.46827380619805,2.32533944750408,0.268273401399619,2.56883753207773,0.987359099480883,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.671032093801859,9.88362758251398,2.16099685996497,0,0.264450566663544,3.19932375802851,3.48355007790658,2.19074684247559,1.4117846723634,1.33426826306922,1.33157938278791,0.474529061544512,0.823494773620054,0.754005626400808,0.397912944082302,0.974820435595601,0,0.648414149624083,1.39398891278057,0,2.39921876480431,2.25415471346161,2.44381593414377,0.969762435838129,1.61312385747733,3.60448261608267,2.36176236767363,2.82597710114475,0.863780147452604,0,1.50160595144485,0.982794975566015,1.12431056192427,1.42002084971952,0,0.25462585178142,0.575392274901621,0.972811360650212,1.09824565275233,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,2.77129785249907,2.08440552947533,1.62964976442026,3.05541154395339,2.81628297946203,4.52266895092903,2.85652369063216,3.70753930929818,3.15270288212382,4.87222317227305,2.87018583583477,3.11340297959902,5.00786447411097,3.61622646453779,0,0,0.491764273019036,0.827810238914197,4.0137647496948,6.21221938938677,0.655739781506702,0.252470927204373,3.47059041357882,6.63745865304285,6.46270193198397,5.9742199488138,8.02075226696619,7.35998980050964,8.50102473517278,7.89090816360542,4.34816555741176,9.96096080907602,1.41940085208269,3.91744328067962,4.88660878060728,1.48473110675282,0,2.6705869977048,1.81394134178851,3.01768127609437,1.47650946440386,3.99665692327106,2.84271122485043,3.63533729477506,3.56497378384721,0.948110273807448,1.05418608574999,2.06271086496374,1.7021980287689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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53623 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000156721_5end | |||
|cluster_id=chrX:38754566..38754604,+ | |||
|description=CAGE_peak_2_at_Gria3_5end | |||
|id=chrX:38754566..38754604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.21e-10!73;UBERON:0005743!1.21e-10!73;UBERON:0000073!6.42e-10!75;UBERON:0001016!6.42e-10!75;UBERON:0000955!4.23e-08!50;UBERON:0006238!4.23e-08!50;UBERON:0004121!6.86e-08!102;UBERON:0000924!6.86e-08!102;UBERON:0006601!6.86e-08!102;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0002616!1.28e-07!49;UBERON:0001049!1.69e-07!52;UBERON:0005068!1.69e-07!52;UBERON:0006241!1.69e-07!52;UBERON:0007135!1.69e-07!52;UBERON:0002346!2.95e-07!71;UBERON:0003075!2.95e-07!71;UBERON:0007284!2.95e-07!71;UBERON:0000033!6.19e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.16e-10,73;UBERON:0001016,2.61e-09,75;UBERON:0002021,4.55e-08,10;UBERON:0000411,4.55e-08,10;UBERON:0001950,4.55e-08,10;UBERON:0000073,6.60e-08,54;UBERON:0001049,2.32e-07,52;UBERON:0005068,2.32e-07,52;UBERON:0006241,2.32e-07,52;UBERON:0007135,2.32e-07,52;UBERON:0000955,5.33e-07,47;UBERON:0006238,5.33e-07,47 | |||
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.55129870453209,6.056748023254,11.7539905112521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0,0,0,3.65100772129174,4.05507724878058,4.22157529971868,1.56478268869608,0.65407546914134,1.75748946187577,2.13872888981712,0.55994568650145,1.43752564364972,0,0,2.35265659399725,3.08711323243136,2.29226751951005,6.70373719960675,0.809265843438391,0,0.633831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.768436610643109,1.34796496001021,0.810035629990144,0.841299845405528,1.42825492201902,1.32521124570968,1.34739879136449,0.383381884072945,0,2.20231761998777,6.51205424234457,5.83704826373725,1.31886287730194,0.640413505216868,1.04182674111352,2.79182999001381,3.93933827022176,5.04234217663473,3.53554302568401,4.55589378557129,1.86399445825301,0.227178579999552,0.982430281388212,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0,1.12355536105401,4.60161870960756,1.55871602761721,2.47337702157238,5.21120653173718,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.91347103775248,2.84831672011889,3.71105347662062,1.73485326766136,0.608930956624282,2.30615497256059,1.20578112442098,1.52865319276416,1.88499886994513,0.988779870937496,0.86759614151947,0.884610551949874,2.10296904931632,2.20841518460394,2.42437626567611,0,3.51336956413857,6.91174132484402,0.255457055208591,10.6635460810269,2.39961092397363,11.3092502095028,8.38827580667007,5.49000723382352,2.01046963380583,14.7750672163435,16.3657892691412,4.77912502486988,10.058958310201,5.09196819251581,1.49288364732112,0.252722758433675,0.631325567659422,0.390361328888111,0.689706313300419,0.900310649026746,1.80845781402858,0.95251098811859,1.7935920839879,1.68663104207512,2.84573707812917,0,0.756424320671277,0.703804496655795,1.53437012699302,2.22437799380478,1.39300866608867,1.23469281844766,3.78165106955137,4.91549231119264,3.08817488537658,5.39910648851626,2.07125772535502,2.57978665979206,1.98068267607116,1.42046841351126,2.75469924446365,2.46827380619805,2.32533944750408,0.268273401399619,2.56883753207773,0.987359099480883,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.671032093801859,9.88362758251398,2.16099685996497,0,0.264450566663544,3.19932375802851,3.48355007790658,2.19074684247559,1.4117846723634,1.33426826306922,1.33157938278791,0.474529061544512,0.823494773620054,0.754005626400808,0.397912944082302,0.974820435595601,0,0.648414149624083,1.39398891278057,0,2.39921876480431,2.25415471346161,2.44381593414377,0.969762435838129,1.61312385747733,3.60448261608267,2.36176236767363,2.82597710114475,0.863780147452604,0,1.50160595144485,0.982794975566015,1.12431056192427,1.42002084971952,0,0.25462585178142,0.575392274901621,0.972811360650212,1.09824565275233,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,2.77129785249907,2.08440552947533,1.62964976442026,3.05541154395339,2.81628297946203,4.52266895092903,2.85652369063216,3.70753930929818,3.15270288212382,4.87222317227305,2.87018583583477,3.11340297959902,5.00786447411097,3.61622646453779,0,0,0.491764273019036,0.827810238914197,4.0137647496948,6.21221938938677,0.655739781506702,0.252470927204373,3.47059041357882,6.63745865304285,6.46270193198397,5.9742199488138,8.02075226696619,7.35998980050964,8.50102473517278,7.89090816360542,4.34816555741176,9.96096080907602,1.41940085208269,3.91744328067962,4.88660878060728,1.48473110675282,0,2.6705869977048,1.81394134178851,3.01768127609437,1.47650946440386,3.99665692327106,2.84271122485043,3.63533729477506,3.56497378384721,0.948110273807448,1.05418608574999,2.06271086496374,1.70219802876894,1.62054984628179,0.258717367565509,2.57204442037911,2.12808280370728,1.24858172321449,1.64549020602121,0.608929898229199,0,0.21183207086382,0.661585194164886,0.98931751764888,1.45317984026315,1.62844897306021,2.02932984805332,1.80554989719567,2.04036585640896,5.7481843623258,0.512612642393558,3.09580301944834,1.29636169158798,0.753473828018764,0.546776910884101,0.457556346413045,2.88963330989554,1.81936888020755,2.21119958087078,1.90934123603023,2.68885594543965,3.45643094115643,2.59212817972323,2.29997125615916,1.31017538247707,2.02296519577231,0.991841468704031,1.30877970992015,0.777689839750757,1.24267862617385,0,2.39226473670366,2.31641886639937,2.72231663681667,1.93739735216597,2.19642963138012,2.34714477291508,2.21347454234715,1.46803082195995,0,0.576060012515731,1.58005560314089,2.22997736819181,1.74608627180206,2.07873316764472,1.25318686967237,1.58945083825012,1.20195449519969,0.886137163047463,1.21159739937777,1.143102099825,0.907435666231565,0.292373642219257,1.05833025804362,1.40252282617883,0.453460767230423,0,0,0,1.15913756419314,2.064507229963,1.09890974560359,0.428736758158132,0.501572104035363,7.90652579663893,8.74617949363636,11.4579102687879,11.1704568523397,12.3314853558716,10.5755145634558,8.10027000278167,9.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| |||
|short_description=p2@Gria3 | |||
}} |
Latest revision as of 20:33, 1 October 2015
Short description: | p2@Gria3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gria3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000156721_5end |
EntrezGene: | Gria3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.16e-10 | 73 |
nervous system | 2.61e-09 | 75 |
occipital lobe | 4.55e-08 | 10 |
visual cortex | 4.55e-08 | 10 |
neocortex | 4.55e-08 | 10 |
regional part of nervous system | 6.60e-08 | 54 |
neural tube | 2.32e-07 | 52 |
neural rod | 2.32e-07 | 52 |
future spinal cord | 2.32e-07 | 52 |
neural keel | 2.32e-07 | 52 |
brain | 5.33e-07 | 47 |
future brain | 5.33e-07 | 47 |