FFCP PHASE1:Mm9::chr11:46140367..46140399,-: Difference between revisions
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|id=chr11:46140367..46140399,-
|short_description=p@chr11:46140367..46140399,-
|description=CAGE_peak_at_chr11:46140367..46140399,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:46140367..46140399,- | |||
|description=CAGE_peak_at_chr11:46140367..46140399,- | |||
|id=chr11:46140367..46140399,- | |||
|ontology_enrichment_celltype=CL:0000838!8.80e-13!12;CL:0000624!2.31e-12!8;CL:0002031!6.69e-12!25;CL:0000542!1.15e-11!13;CL:0000051!1.15e-11!13;CL:0000084!4.54e-11!11;CL:0000827!4.54e-11!11;CL:0000791!7.22e-11!9;CL:0000789!7.22e-11!9;CL:0002420!7.22e-11!9;CL:0002419!7.22e-11!9;CL:0000790!7.22e-11!9;CL:0000893!7.00e-09!6;CL:0002489!7.00e-09!6;CL:0000898!7.00e-09!6;CL:0000809!7.00e-09!6;CL:0000810!7.00e-09!6;CL:0000895!7.00e-09!6;CL:0000808!7.00e-09!6;CL:0000894!7.00e-09!6;CL:0000806!7.00e-09!6;CL:0000807!7.00e-09!6;CL:0000805!7.00e-09!6;CL:0002425!7.00e-09!6;CL:0002436!7.00e-09!6;CL:0002427!7.00e-09!6;CL:0002428!7.00e-09!6;CL:0002429!7.00e-09!6;CL:0002433!7.00e-09!6;CL:0002431!7.00e-09!6;CL:0002432!7.00e-09!6;CL:0000988!1.18e-08!32;CL:0002032!1.18e-08!32;CL:0000037!1.18e-08!32;CL:0000566!1.18e-08!32;CL:0000837!1.18e-08!32;CL:0000738!1.61e-08!17;CL:0002087!1.61e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.79e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.12e-08!3;DOID:4045!3.12e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-30,3;DOID:4045,5.70e-30,3;DOID:0050686,2.24e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.21e-10!48;UBERON:0002390!1.12e-09!45;UBERON:0003061!1.12e-09!45;UBERON:0004177!3.11e-09!29;UBERON:0002370!1.92e-08!23;UBERON:0000974!1.92e-08!23;UBERON:0004807!1.92e-08!23;UBERON:0005058!1.92e-08!23;UBERON:0003351!1.92e-08!23;UBERON:0009113!1.92e-08!23;UBERON:0003295!1.92e-08!23;UBERON:0009722!1.92e-08!23;UBERON:0005562!1.92e-08!23;UBERON:0007690!1.92e-08!23;UBERON:0006562!5.31e-08!24;UBERON:0003408!5.31e-08!24;UBERON:0001557!5.31e-08!24;UBERON:0001042!5.31e-08!24;UBERON:0008814!5.31e-08!24;UBERON:0009145!5.31e-08!24;UBERON:0002405!1.67e-07!70;UBERON:0003081!1.71e-07!88;UBERON:0007823!1.73e-07!5;UBERON:0000072!7.09e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.19e-11,1;UBERON:0001097,7.19e-11,1;UBERON:0003968,7.19e-11,1;UBERON:0001467,7.19e-11,1;UBERON:0001134,1.79e-10,9;UBERON:0002036,1.79e-10,9;UBERON:0002385,1.79e-10,9;UBERON:0000486,1.79e-10,9;UBERON:0007503,1.79e-10,9;UBERON:0001015,1.79e-10,9;UBERON:0002329,1.79e-10,9;UBERON:0003082,1.79e-10,9;UBERON:0003059,1.79e-10,9;UBERON:0007282,1.79e-10,9;UBERON:0004290,1.79e-10,9;UBERON:0009618,1.79e-10,9;UBERON:0000383,1.73e-09,10;UBERON:0007524,1.11e-08,11;UBERON:0003077,1.11e-08,11;UBERON:0007285,1.11e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0,0.513602189793617,0.524522414513984,0.333109761815663,0,0,0.788655413395594,1.50825876966313,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,17.7998072951091,18.8234076169925,10.9287277593351,27.1885797697446,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0,0.341741761595705,0,0,0,0,1.14389086603261,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0,0.513602189793617,0.524522414513984,0.333109761815663,0,0,0.788655413395594,1.50825876966313,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,17.7998072951091,18.8234076169925,10.9287277593351,27.1885797697446,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0,0.341741761595705,0,0,0,0,1.14389086603261,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:46140367..46140399,- | |||
}} | }} |
Latest revision as of 22:51, 5 August 2015
Short description: | p@chr11:46140367..46140399, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:46140367..46140399, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.19e-11 | 1 |
axillary lymph node | 7.19e-11 | 1 |
peripheral lymph node | 7.19e-11 | 1 |
shoulder | 7.19e-11 | 1 |
skeletal muscle tissue | 1.79e-10 | 9 |
striated muscle tissue | 1.79e-10 | 9 |
muscle tissue | 1.79e-10 | 9 |
multilaminar epithelium | 1.79e-10 | 9 |
epithelial vesicle | 1.79e-10 | 9 |
musculature | 1.79e-10 | 9 |
somite | 1.79e-10 | 9 |
myotome | 1.79e-10 | 9 |
presomitic mesoderm | 1.79e-10 | 9 |
presumptive segmental plate | 1.79e-10 | 9 |
dermomyotome | 1.79e-10 | 9 |
trunk paraxial mesoderm | 1.79e-10 | 9 |
musculature of body | 1.73e-09 | 10 |
dense mesenchyme tissue | 1.11e-08 | 11 |
paraxial mesoderm | 1.11e-08 | 11 |
presumptive paraxial mesoderm | 1.11e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.70e-30 | 3 |
muscle cancer | 5.70e-30 | 3 |
organ system cancer | 2.24e-15 | 6 |