FFCP PHASE1:Mm9::chrX:149078974..149079013,-: Difference between revisions
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{{FFCP|EntrezGene=110380|HGNC=|MCL_coexpression_id=1|UniProt=A2ALU4|association_with_transcript=7bp_to_uc009uqj.1,uc009uqk.1_5end|description=CAGE_peak_2_at_Shroom2_5end|id=chrX:149078974..149079013,-|ontology_enrichment_celltype=CL:0000540!3.80e-17!33;CL:0000047!3.80e-17!33;CL:0000031!3.80e-17!33;CL:0000404!3.80e-17!33;CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23;CL:0000393!1.16e-14!39;CL:0000211!1.16e-14!39;CL:0000221!4.74e-13!44;CL:0000133!4.74e-13!44;CL:0002319!7.62e-13!43;CL:0000055!7.28e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-19,33;CL:0000047,1.84e-19,33;CL:0000031,1.84e-19,33;CL:0000404,1.84e-19,33;CL:0000117,5.03e-19,23;CL:0000337,5.03e-19,23;CL:0000393,7.75e-15,39;CL:0000211,7.75e-15,39;CL:0002319,1.63e-12,43;CL:0000221,5.27e-12,44;CL:0000133,5.27e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0004121!2.89e-29!102;UBERON:0000924!2.89e-29!102;UBERON:0006601!2.89e-29!102;UBERON:0002346!4.95e-26!71;UBERON:0003075!4.95e-26!71;UBERON:0007284!4.95e-26!71;UBERON:0000033!6.81e-25!63;UBERON:0001049!5.31e-24!52;UBERON:0005068!5.31e-24!52;UBERON:0006241!5.31e-24!52;UBERON:0007135!5.31e-24!52;UBERON:0000955!3.27e-22!50;UBERON:0006238!3.27e-22!50;UBERON:0003056!6.32e-22!49;UBERON:0002020!2.00e-21!34;UBERON:0002616!2.14e-21!49;UBERON:0003080!4.57e-19!40;UBERON:0002780!2.63e-18!39;UBERON:0001890!2.63e-18!39;UBERON:0006240!2.63e-18!39;UBERON:0002791!2.29e-17!29;UBERON:0003528!2.29e-17!29;UBERON:0001893!2.29e-17!29;UBERON:0007811!6.70e-14!86;UBERON:0000956!2.52e-12!21;UBERON:0001869!2.52e-12!21;UBERON:0000203!2.52e-12!21;UBERON:0002619!6.32e-11!17;UBERON:0000153!7.46e-11!94;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.05e-31,73;UBERON:0001016,9.56e-30,75;UBERON:0002346,1.31e-27,64;UBERON:0003075,1.31e-27,64;UBERON:0007284,1.31e-27,64;UBERON:0000073,2.14e-27,54;UBERON:0002020,2.19e-26,34;UBERON:0004121,4.63e-26,95;UBERON:0000924,4.63e-26,95;UBERON:0006601,4.63e-26,95;UBERON:0001049,1.50e-25,52;UBERON:0005068,1.50e-25,52;UBERON:0006241,1.50e-25,52;UBERON:0007135,1.50e-25,52;UBERON:0010371,5.44e-22,73;UBERON:0003528,3.53e-21,29;UBERON:0002791,3.53e-21,29;UBERON:0001893,3.53e-21,29;UBERON:0003056,9.57e-21,49;UBERON:0000955,1.03e-20,47;UBERON:0006238,1.03e-20,47;UBERON:0002616,9.40e-20,46;UBERON:0003080,6.99e-19,40;UBERON:0002780,5.72e-18,39;UBERON:0001890,5.72e-18,39;UBERON:0006240,5.72e-18,39;UBERON:0000956,1.04e-14,21;UBERON:0001869,1.04e-14,21;UBERON:0000203,1.04e-14,21;UBERON:0010314,6.21e-14,92;UBERON:0002619,6.94e-13,17;UBERON:0002021,7.48e-12,10;UBERON:0000411,7.48e-12,10;UBERON:0001950,7.48e-12,10;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0002240,2.43e-07,6;UBERON:0005174,2.43e-07,6;UBERON:0001137,2.43e-07,6;UBERON:0003076,3.22e-07,12;UBERON:0003057,3.22e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,23.4687094597133,41.7902873624906,27.8885817542719,0.677689064138264,0,0,0,0,0,0.768436610643109,1.97010263386108,2.43010688997043,3.36519938162211,38.5628828945135,41.0815486170001,11.2691535277758,7.09256485534949,6.43453150627015,46.2486700197433,26.3035916455487,24.1162257212302,21.4974649000216,19.5783557309157,17.7110545989298,21.7762739221077,17.4456409109821,16.1966142643419,86.6208041292583,89.1246721802384,42.4990736481685,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,42.8401228697793,36.6000482254901,16.8376831831238,45.889620530761,46.2844977767898,23.8956251243494,25.1473957755024,0,0,0,1.26265113531884,0.520481771850815,0.459804208866946,2.52086981727489,1.80845781402858,4.08218994907967,5.89323113310309,5.62210347358373,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,29.6508827475419,15.3327872445134,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,35.3211297973142,32.5848488726325,0,0,0.631016438832513,1.17131623288992,2.15423397732799,4.30143836314594,3.7875774594007,2.54768877709949,1.61924280669958,2.92255857911312,1.58115111178609,52.3753745767545,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,0,0.535106452806212,1.31639216481697,1.2178597964584,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,37.0850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,64.9464619009626,69.0487854760765,73.3306257202428,45.7129465034209,65.7679218979817,65.7192690729039,54.0018000185445,49.5353323546642,62.080510030836,57.471394604452,1.14166082342594,2.79317411380722,3.07320490357441,5.10524105843418,8.17491334249131,7.16989682955055,6.22290837844523,5.97501665992793,6.73930340142812,5.30664144703975,6.59046179714623,6.41329560712659,4.02658482120494,4.60981097315059,5.85841783347255,5.23923060411381,4.40360438590451,3.6652751888104,3.29668720642645,4.26876868389752,4.4573002810104,5.14679837862079,5.48403236878838,3.63366041580821,4.89368778159719,4.56918882615053,5.48783918618318,6.05060336307039,4.88894809845102,3.92799590160417,5.57584585183618,3.25064791839359,4.09231043169689,3.56354734727722,5.78719832943424,11.7410971630835,5.38042699424439,5.58664740525576,3.25190164517034,2.8676884485537,2.08681052058379|short_description=p2@Shroom2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110380 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2ALU4 | |||
|association_with_transcript=7bp_to_uc009uqj.1,uc009uqk.1_5end | |||
|cluster_id=chrX:149078974..149079013,- | |||
|description=CAGE_peak_2_at_Shroom2_5end | |||
|id=chrX:149078974..149079013,- | |||
|ontology_enrichment_celltype=CL:0000540!3.80e-17!33;CL:0000047!3.80e-17!33;CL:0000031!3.80e-17!33;CL:0000404!3.80e-17!33;CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23;CL:0000393!1.16e-14!39;CL:0000211!1.16e-14!39;CL:0000221!4.74e-13!44;CL:0000133!4.74e-13!44;CL:0002319!7.62e-13!43;CL:0000055!7.28e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-19,33;CL:0000047,1.84e-19,33;CL:0000031,1.84e-19,33;CL:0000404,1.84e-19,33;CL:0000117,5.03e-19,23;CL:0000337,5.03e-19,23;CL:0000393,7.75e-15,39;CL:0000211,7.75e-15,39;CL:0002319,1.63e-12,43;CL:0000221,5.27e-12,44;CL:0000133,5.27e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0004121!2.89e-29!102;UBERON:0000924!2.89e-29!102;UBERON:0006601!2.89e-29!102;UBERON:0002346!4.95e-26!71;UBERON:0003075!4.95e-26!71;UBERON:0007284!4.95e-26!71;UBERON:0000033!6.81e-25!63;UBERON:0001049!5.31e-24!52;UBERON:0005068!5.31e-24!52;UBERON:0006241!5.31e-24!52;UBERON:0007135!5.31e-24!52;UBERON:0000955!3.27e-22!50;UBERON:0006238!3.27e-22!50;UBERON:0003056!6.32e-22!49;UBERON:0002020!2.00e-21!34;UBERON:0002616!2.14e-21!49;UBERON:0003080!4.57e-19!40;UBERON:0002780!2.63e-18!39;UBERON:0001890!2.63e-18!39;UBERON:0006240!2.63e-18!39;UBERON:0002791!2.29e-17!29;UBERON:0003528!2.29e-17!29;UBERON:0001893!2.29e-17!29;UBERON:0007811!6.70e-14!86;UBERON:0000956!2.52e-12!21;UBERON:0001869!2.52e-12!21;UBERON:0000203!2.52e-12!21;UBERON:0002619!6.32e-11!17;UBERON:0000153!7.46e-11!94;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.05e-31,73;UBERON:0001016,9.56e-30,75;UBERON:0002346,1.31e-27,64;UBERON:0003075,1.31e-27,64;UBERON:0007284,1.31e-27,64;UBERON:0000073,2.14e-27,54;UBERON:0002020,2.19e-26,34;UBERON:0004121,4.63e-26,95;UBERON:0000924,4.63e-26,95;UBERON:0006601,4.63e-26,95;UBERON:0001049,1.50e-25,52;UBERON:0005068,1.50e-25,52;UBERON:0006241,1.50e-25,52;UBERON:0007135,1.50e-25,52;UBERON:0010371,5.44e-22,73;UBERON:0003528,3.53e-21,29;UBERON:0002791,3.53e-21,29;UBERON:0001893,3.53e-21,29;UBERON:0003056,9.57e-21,49;UBERON:0000955,1.03e-20,47;UBERON:0006238,1.03e-20,47;UBERON:0002616,9.40e-20,46;UBERON:0003080,6.99e-19,40;UBERON:0002780,5.72e-18,39;UBERON:0001890,5.72e-18,39;UBERON:0006240,5.72e-18,39;UBERON:0000956,1.04e-14,21;UBERON:0001869,1.04e-14,21;UBERON:0000203,1.04e-14,21;UBERON:0010314,6.21e-14,92;UBERON:0002619,6.94e-13,17;UBERON:0002021,7.48e-12,10;UBERON:0000411,7.48e-12,10;UBERON:0001950,7.48e-12,10;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0002240,2.43e-07,6;UBERON:0005174,2.43e-07,6;UBERON:0001137,2.43e-07,6;UBERON:0003076,3.22e-07,12;UBERON:0003057,3.22e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,23.4687094597133,41.7902873624906,27.8885817542719,0.677689064138264,0,0,0,0,0,0.768436610643109,1.97010263386108,2.43010688997043,3.36519938162211,38.5628828945135,41.0815486170001,11.2691535277758,7.09256485534949,6.43453150627015,46.2486700197433,26.3035916455487,24.1162257212302,21.4974649000216,19.5783557309157,17.7110545989298,21.7762739221077,17.4456409109821,16.1966142643419,86.6208041292583,89.1246721802384,42.4990736481685,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,42.8401228697793,36.6000482254901,16.8376831831238,45.889620530761,46.2844977767898,23.8956251243494,25.1473957755024,0,0,0,1.26265113531884,0.520481771850815,0.459804208866946,2.52086981727489,1.80845781402858,4.08218994907967,5.89323113310309,5.62210347358373,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,29.6508827475419,15.3327872445134,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,35.3211297973142,32.5848488726325,0,0,0.631016438832513,1.17131623288992,2.15423397732799,4.30143836314594,3.7875774594007,2.54768877709949,1.61924280669958,2.92255857911312,1.58115111178609,52.3753745767545,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,0,0.535106452806212,1.31639216481697,1.2178597964584,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,37.0850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,64.9464619009626,69.0487854760765,73.3306257202428,45.7129465034209,65.7679218979817,65.7192690729039,54.0018000185445,49.5353323546642,62.080510030836,57.471394604452,1.14166082342594,2.79317411380722,3.07320490357441,5.10524105843418,8.17491334249131,7.16989682955055,6.22290837844523,5.97501665992793,6.73930340142812,5.30664144703975,6.59046179714623,6.41329560712659,4.02658482120494,4.60981097315059,5.85841783347255,5.23923060411381,4.40360438590451,3.6652751888104,3.29668720642645,4.26876868389752,4.4573002810104,5.14679837862079,5.48403236878838,3.63366041580821,4.89368778159719,4.56918882615053,5.48783918618318,6.05060336307039,4.88894809845102,3.92799590160417,5.57584585183618,3.25064791839359,4.09231043169689,3.56354734727722,5.78719832943424,11.7410971630835,5.38042699424439,5.58664740525576,3.25190164517034,2.8676884485537,2.08681052058379 | |||
|short_description=p2@Shroom2 | |||
}} |
Latest revision as of 16:53, 1 October 2015
Short description: | p2@Shroom2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Shroom2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 7bp_to_uc009uqj.1, uc009uqk.1_5end |
EntrezGene: | Shroom2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.84e-19 | 33 |
neuronal stem cell | 1.84e-19 | 33 |
neuroblast | 1.84e-19 | 33 |
electrically signaling cell | 1.84e-19 | 33 |
CNS neuron (sensu Vertebrata) | 5.03e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.03e-19 | 23 |
electrically responsive cell | 7.75e-15 | 39 |
electrically active cell | 7.75e-15 | 39 |
neural cell | 1.63e-12 | 43 |
ectodermal cell | 5.27e-12 | 44 |
neurectodermal cell | 5.27e-12 | 44 |