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FFCP PHASE1:Mm9::chrX:100551803..100551827,+: Difference between revisions

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{{FFCP|EntrezGene=12212|HGNC=|MCL_coexpression_id=937|UniProt=Q8CBW7,A2RT09|association_with_transcript=0bp_to_ENSMUST00000116547,NM_009767,uc009tzl.2_5end|description=CAGE_peak_3_at_Chic1_5end|id=chrX:100551803..100551827,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.27e-19!63;UBERON:0002346!2.67e-17!71;UBERON:0003075!2.67e-17!71;UBERON:0007284!2.67e-17!71;UBERON:0000955!1.54e-16!50;UBERON:0006238!1.54e-16!50;UBERON:0002616!7.25e-16!49;UBERON:0003056!6.35e-15!49;UBERON:0001049!3.52e-14!52;UBERON:0005068!3.52e-14!52;UBERON:0006241!3.52e-14!52;UBERON:0007135!3.52e-14!52;UBERON:0004121!4.32e-14!102;UBERON:0000924!4.32e-14!102;UBERON:0006601!4.32e-14!102;UBERON:0000073!1.07e-13!75;UBERON:0001016!1.07e-13!75;UBERON:0001017!2.85e-13!73;UBERON:0005743!2.85e-13!73;UBERON:0003080!2.27e-12!40;UBERON:0002780!8.61e-12!39;UBERON:0001890!8.61e-12!39;UBERON:0006240!8.61e-12!39;UBERON:0000153!5.27e-09!94;UBERON:0000025!2.72e-08!114;UBERON:0007811!4.88e-08!86;UBERON:0004111!5.07e-08!122;UBERON:0002791!1.77e-07!29;UBERON:0003528!1.77e-07!29;UBERON:0001893!1.77e-07!29;UBERON:0002020!3.47e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.12e-16,64;UBERON:0003075,1.12e-16,64;UBERON:0007284,1.12e-16,64;UBERON:0000073,2.86e-15,54;UBERON:0000955,3.73e-15,47;UBERON:0006238,3.73e-15,47;UBERON:0003056,4.15e-15,49;UBERON:0002616,2.02e-14,46;UBERON:0010314,2.09e-14,92;UBERON:0001049,6.19e-14,52;UBERON:0005068,6.19e-14,52;UBERON:0006241,6.19e-14,52;UBERON:0007135,6.19e-14,52;UBERON:0001016,1.08e-13,75;UBERON:0010371,1.20e-13,73;UBERON:0001017,3.25e-13,73;UBERON:0004121,1.38e-12,95;UBERON:0000924,1.38e-12,95;UBERON:0006601,1.38e-12,95;UBERON:0003080,3.55e-12,40;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0000025,1.07e-07,114;UBERON:0004111,4.82e-07,122;UBERON:0003528,8.71e-07,29;UBERON:0002791,8.71e-07,29;UBERON:0001893,8.71e-07,29|phase1_expression=2.24208385946712,0,0.454999239389536,0.30246421130683,0,1.51091344720701,1.16806320297763,3.35720640948098,0.563154888606667,0,0.34243593645101,0.478632953972018,1.02720437958723,1.39872643870396,0,0,0,0.630924330716475,0.411343300817216,0.42438965179803,1.7008658030214,0,0,0.159992422793407,0.68822784320151,2.29692785646008,0,0,0.950117097281869,1.76421090831952,0.221730510655305,0,0,0,0,1.16364251750945,0.408338712524738,0,0,0,0,0,0,2.01434908760924,1.21652317463417,0.183546752161682,0,1.52617609466313,1.31811709640683,1.74986909166855,0.979904951377538,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,2.06268836910977,1.01158230429799,0.528990979272033,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,1.47227472945967,0.571301968807607,0.662605622854841,0.979926393719632,1.34183659425531,0.919218786610021,4.40463523997555,5.10749352340751,4.6081959976873,0.923204014111357,1.09785172322892,2.08365348222704,3.35019598801657,7.31591393041184,5.34793867218835,0.883885756421003,1.85083185038834,2.23679334990361,1.13589289999776,2.26714680320357,2.6087803983151,1.72084775396277,0,1.07940638327563,0,0,0.983110940922263,0.852151612890289,0.259786004602869,0,1.97180787687353,1.28326477414318,0,0,0.432982082022428,0,0,1.1418387971906,1.29468941823586,3.41416919849097,0.520455980298408,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,2.76466500925286,0.247194967734374,1.3013942122792,0,1.13236794963186,0.220841518460394,0,0,5.27005434620785,4.81727425670947,0.255457055208591,0.11981512450592,0,0.127070227073065,4.34392854273986,2.74500361691176,3.01570445070875,3.82413504423008,3.06858548796397,5.40248915854856,5.19172041816825,1.93494791315601,1.11966273549084,1.26361379216837,2.73574412652416,1.82168620147785,1.14951052216736,1.0803727788321,1.80845781402858,2.31324097114515,2.3060469651273,1.78033276663485,2.58703370739016,0.862271971731369,1.32374256117473,1.75951124163949,2.41115305670332,2.50242524303038,1.0447564995665,0.823128545631774,1.99034266818493,0,0,0,2.89976081549703,0.938104239924385,1.62055855314913,1.42046841351126,1.37734962223183,1.3884040159864,1.39520366850245,0.804820204198858,0.817357396570186,1.31647879930784,0.820837320395476,0.810688095458557,0.730999937126662,0.658650345873152,1.07365135008297,4.41608891984667,1.74937841044784,0.330418782983798,0,1.91959425481711,0.696710015581316,1.03093969057675,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,1.31759163779209,1.50801125280162,0.795825888164603,2.14460495831032,0.898819408654221,1.51296634912286,0.995706366271836,0.569003702859245,1.25673363870702,3.38123207019241,1.83286195060783,1.35766741017338,1.68325967736765,2.27651533647326,2.80459281161244,3.45397201251025,0.987177311374404,1.77871576252289,0.667380422864376,0.393117990226406,0,0,0.72353147925725,0.25462585178142,0,0.486405680325106,0,0,0.372140947668503,0.312037673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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12212
|HGNC=
|MCL_coexpression_id=937
|TSSclassifier=NA
|UniProt=Q8CBW7,A2RT09
|association_with_transcript=0bp_to_ENSMUST00000116547,NM_009767,uc009tzl.2_5end
|cluster_id=chrX:100551803..100551827,+
|description=CAGE_peak_3_at_Chic1_5end
|id=chrX:100551803..100551827,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.27e-19!63;UBERON:0002346!2.67e-17!71;UBERON:0003075!2.67e-17!71;UBERON:0007284!2.67e-17!71;UBERON:0000955!1.54e-16!50;UBERON:0006238!1.54e-16!50;UBERON:0002616!7.25e-16!49;UBERON:0003056!6.35e-15!49;UBERON:0001049!3.52e-14!52;UBERON:0005068!3.52e-14!52;UBERON:0006241!3.52e-14!52;UBERON:0007135!3.52e-14!52;UBERON:0004121!4.32e-14!102;UBERON:0000924!4.32e-14!102;UBERON:0006601!4.32e-14!102;UBERON:0000073!1.07e-13!75;UBERON:0001016!1.07e-13!75;UBERON:0001017!2.85e-13!73;UBERON:0005743!2.85e-13!73;UBERON:0003080!2.27e-12!40;UBERON:0002780!8.61e-12!39;UBERON:0001890!8.61e-12!39;UBERON:0006240!8.61e-12!39;UBERON:0000153!5.27e-09!94;UBERON:0000025!2.72e-08!114;UBERON:0007811!4.88e-08!86;UBERON:0004111!5.07e-08!122;UBERON:0002791!1.77e-07!29;UBERON:0003528!1.77e-07!29;UBERON:0001893!1.77e-07!29;UBERON:0002020!3.47e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.12e-16,64;UBERON:0003075,1.12e-16,64;UBERON:0007284,1.12e-16,64;UBERON:0000073,2.86e-15,54;UBERON:0000955,3.73e-15,47;UBERON:0006238,3.73e-15,47;UBERON:0003056,4.15e-15,49;UBERON:0002616,2.02e-14,46;UBERON:0010314,2.09e-14,92;UBERON:0001049,6.19e-14,52;UBERON:0005068,6.19e-14,52;UBERON:0006241,6.19e-14,52;UBERON:0007135,6.19e-14,52;UBERON:0001016,1.08e-13,75;UBERON:0010371,1.20e-13,73;UBERON:0001017,3.25e-13,73;UBERON:0004121,1.38e-12,95;UBERON:0000924,1.38e-12,95;UBERON:0006601,1.38e-12,95;UBERON:0003080,3.55e-12,40;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0000025,1.07e-07,114;UBERON:0004111,4.82e-07,122;UBERON:0003528,8.71e-07,29;UBERON:0002791,8.71e-07,29;UBERON:0001893,8.71e-07,29
|phase1_expression=2.24208385946712,0,0.454999239389536,0.30246421130683,0,1.51091344720701,1.16806320297763,3.35720640948098,0.563154888606667,0,0.34243593645101,0.478632953972018,1.02720437958723,1.39872643870396,0,0,0,0.630924330716475,0.411343300817216,0.42438965179803,1.7008658030214,0,0,0.159992422793407,0.68822784320151,2.29692785646008,0,0,0.950117097281869,1.76421090831952,0.221730510655305,0,0,0,0,1.16364251750945,0.408338712524738,0,0,0,0,0,0,2.01434908760924,1.21652317463417,0.183546752161682,0,1.52617609466313,1.31811709640683,1.74986909166855,0.979904951377538,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,2.06268836910977,1.01158230429799,0.528990979272033,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,1.47227472945967,0.571301968807607,0.662605622854841,0.979926393719632,1.34183659425531,0.919218786610021,4.40463523997555,5.10749352340751,4.6081959976873,0.923204014111357,1.09785172322892,2.08365348222704,3.35019598801657,7.31591393041184,5.34793867218835,0.883885756421003,1.85083185038834,2.23679334990361,1.13589289999776,2.26714680320357,2.6087803983151,1.72084775396277,0,1.07940638327563,0,0,0.983110940922263,0.852151612890289,0.259786004602869,0,1.97180787687353,1.28326477414318,0,0,0.432982082022428,0,0,1.1418387971906,1.29468941823586,3.41416919849097,0.520455980298408,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,2.76466500925286,0.247194967734374,1.3013942122792,0,1.13236794963186,0.220841518460394,0,0,5.27005434620785,4.81727425670947,0.255457055208591,0.11981512450592,0,0.127070227073065,4.34392854273986,2.74500361691176,3.01570445070875,3.82413504423008,3.06858548796397,5.40248915854856,5.19172041816825,1.93494791315601,1.11966273549084,1.26361379216837,2.73574412652416,1.82168620147785,1.14951052216736,1.0803727788321,1.80845781402858,2.31324097114515,2.3060469651273,1.78033276663485,2.58703370739016,0.862271971731369,1.32374256117473,1.75951124163949,2.41115305670332,2.50242524303038,1.0447564995665,0.823128545631774,1.99034266818493,0,0,0,2.89976081549703,0.938104239924385,1.62055855314913,1.42046841351126,1.37734962223183,1.3884040159864,1.39520366850245,0.804820204198858,0.817357396570186,1.31647879930784,0.820837320395476,0.810688095458557,0.730999937126662,0.658650345873152,1.07365135008297,4.41608891984667,1.74937841044784,0.330418782983798,0,1.91959425481711,0.696710015581316,1.03093969057675,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,1.31759163779209,1.50801125280162,0.795825888164603,2.14460495831032,0.898819408654221,1.51296634912286,0.995706366271836,0.569003702859245,1.25673363870702,3.38123207019241,1.83286195060783,1.35766741017338,1.68325967736765,2.27651533647326,2.80459281161244,3.45397201251025,0.987177311374404,1.77871576252289,0.667380422864376,0.393117990226406,0,0,0.72353147925725,0.25462585178142,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,1.25578189465339,2.41221760681684,0.739012760666419,1.13694847062291,0.814824882210129,0.848725428875941,0.704070744865506,1.17254380209271,0,0.390267295715598,2.36452716159286,1.7717175171902,0.797273843287435,1.63863314715738,1.89953480052485,2.31438493730419,0,0,0,0.551873492609465,4.0137647496948,6.21221938938677,0.983609672260053,0.504941854408746,1.26203287766503,1.56175497718655,0.646270193198397,0.716906393857656,1.11399337041197,1.98153571552183,0,2.33804686329049,0.395287777946524,6.10510501201433,1.70328102249922,0.890328018336276,1.79175655288934,2.63952196756057,1.32745138339963,0.485561272309963,0.906970670894253,1.69744571780308,0,2.45948118355142,0.775284879504663,0.363533729477506,1.42598951353889,0.316036757935816,0,0,7.48967132658334,2.16073312837572,1.03486947026204,1.92903331528433,3.01478397191865,2.67553226403106,4.11372551505302,2.74018454203139,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.968786560175433,0.482503399425247,0.358117032009409,0.820704498725306,0.582961673259701,4.82105785227325,0.170870880797853,0.82554747185289,0.925972636848558,0.376736914009382,0.27338845544205,0.228778173206523,0,0.559805809294632,0.414599921413271,0.954670618015114,0.474503990371703,1.82987520414164,1.08005340821801,1.46361807210128,0.436725127492355,1.07891477107857,1.23980183588004,0.523511883968059,0.777689839750757,0.621339313086926,0.56369293868419,1.19613236835183,1.32366792365678,2.13896307178452,1.42075805825504,1.85851738039856,2.69921648885234,1.69265700297135,3.04092098834561,0.966336483304024,0.576060012515731,0.316011120628178,0,0.616265742988964,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.304827226619999,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0.665957860122194,0.179427713218951,0.167884616364078,0.965947970160952,0.93841237725591,2.19781949120718,0.428736758158132,1.00314420807073,1.12950368523413,1.84130094602871,1.71868654031819,1.54667864109319,3.42541259885321,0.755393897389701,2.02506750069542,4.05289082901798,4.98456649882625,2.5888015587591,1.14166082342594,1.99512436700516,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,1.03017528619447,0.962757628775446,1.01078884705519,1.77435509923168,0.754505365544305,1.03005658216871,1.53660365771686,1.60819313075717,1.90517476513229,0.463537303779422,1.15745532278223,0.412085900803307,1.47198920134397,1.02860775715625,1.24233064311536,1.43061713968393,1.45346416632329,1.03520318456864,1.09998990259179,1.09756783723664,1.57841826862706,0.814824683075171,1.12228454331548,1.18635018124174,1.28055827088233,0.818462086339379,1.08455788830176,2.12197272079256,0.749431733813838,2.10538447600868,1.07435527024149,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p3@Chic1
}}

Latest revision as of 11:43, 1 October 2015

Short description:p3@Chic1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chic1_5end
Coexpression cluster:MCL_coexpression_mm9:937
Association with transcript: 0bp_to_ENSMUST00000116547, NM_009767, uc009tzl.2_5end
EntrezGene:Chic1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chic1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.12e-1664
neural plate1.12e-1664
presumptive neural plate1.12e-1664
regional part of nervous system2.86e-1554
brain3.73e-1547
future brain3.73e-1547
pre-chordal neural plate4.15e-1549
regional part of brain2.02e-1446
structure with developmental contribution from neural crest2.09e-1492
neural tube6.19e-1452
neural rod6.19e-1452
future spinal cord6.19e-1452
neural keel6.19e-1452
nervous system1.08e-1375
ecto-epithelium1.20e-1373
central nervous system3.25e-1373
ectoderm-derived structure1.38e-1295
ectoderm1.38e-1295
presumptive ectoderm1.38e-1295
anterior neural tube3.55e-1240
regional part of forebrain1.55e-1139
forebrain1.55e-1139
future forebrain1.55e-1139
tube1.07e-07114
anatomical conduit4.82e-07122
brain grey matter8.71e-0729
regional part of telencephalon8.71e-0729
telencephalon8.71e-0729
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