FFCP PHASE1:Mm9::chr9:99337066..99337100,-: Difference between revisions
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{{FFCP|EntrezGene=17532|HGNC=|MCL_coexpression_id=620|UniProt=O08989,Q3TPX5|association_with_transcript=30bp_to_NM_008624,uc009rec.1_5end|description=CAGE_peak_3_at_Mras_5end|id=chr9:99337066..99337100,-|ontology_enrichment_celltype=CL:0002319!2.22e-12!43;CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000055!2.51e-12!50;CL:0000221!3.14e-12!44;CL:0000133!3.14e-12!44;CL:0000393!1.87e-08!39;CL:0000211!1.87e-08!39;CL:0000540!1.14e-07!33;CL:0000047!1.14e-07!33;CL:0000031!1.14e-07!33;CL:0000404!1.14e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.99e-14,23;CL:0000337,8.99e-14,23;CL:0002319,2.72e-12,43;CL:0000221,3.80e-12,44;CL:0000133,3.80e-12,44;CL:0000393,4.17e-08,39;CL:0000211,4.17e-08,39;CL:0000540,3.31e-07,33;CL:0000047,3.31e-07,33;CL:0000031,3.31e-07,33;CL:0000404,3.31e-07,33;CL:0000333,4.74e-07,10;CL:0000095,4.74e-07,10;CL:0000243,4.74e-07,10;CL:0000123,4.74e-07,10;CL:0000125,4.74e-07,10;CL:0000030,4.74e-07,10;CL:0000339,4.74e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.91e-25!75;UBERON:0001016!3.91e-25!75;UBERON:0001017!1.91e-24!73;UBERON:0005743!1.91e-24!73;UBERON:0002346!9.85e-24!71;UBERON:0003075!9.85e-24!71;UBERON:0007284!9.85e-24!71;UBERON:0001049!2.42e-23!52;UBERON:0005068!2.42e-23!52;UBERON:0006241!2.42e-23!52;UBERON:0007135!2.42e-23!52;UBERON:0004121!7.14e-23!102;UBERON:0000924!7.14e-23!102;UBERON:0006601!7.14e-23!102;UBERON:0000955!6.64e-22!50;UBERON:0006238!6.64e-22!50;UBERON:0002616!2.11e-21!49;UBERON:0002020!1.51e-20!34;UBERON:0000033!1.17e-18!63;UBERON:0002791!1.15e-17!29;UBERON:0003528!1.15e-17!29;UBERON:0001893!1.15e-17!29;UBERON:0003080!1.24e-16!40;UBERON:0002780!3.98e-16!39;UBERON:0001890!3.98e-16!39;UBERON:0006240!3.98e-16!39;UBERON:0003056!1.01e-15!49;UBERON:0000956!3.04e-13!21;UBERON:0001869!3.04e-13!21;UBERON:0000203!3.04e-13!21;UBERON:0002619!2.77e-11!17;UBERON:0000025!1.38e-09!114;UBERON:0000153!3.59e-09!94;UBERON:0007811!3.67e-09!86;UBERON:0004111!2.83e-08!122;UBERON:0002021!9.94e-08!10;UBERON:0000411!9.94e-08!10;UBERON:0001950!9.94e-08!10;UBERON:0003076!2.14e-07!12;UBERON:0003057!2.14e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.30e-26,54;UBERON:0001016,1.68e-25,75;UBERON:0001049,4.00e-25,52;UBERON:0005068,4.00e-25,52;UBERON:0006241,4.00e-25,52;UBERON:0007135,4.00e-25,52;UBERON:0001017,9.83e-25,73;UBERON:0002020,4.66e-23,34;UBERON:0002346,3.93e-22,64;UBERON:0003075,3.93e-22,64;UBERON:0007284,3.93e-22,64;UBERON:0000955,1.00e-21,47;UBERON:0006238,1.00e-21,47;UBERON:0002616,3.60e-21,46;UBERON:0004121,2.40e-20,95;UBERON:0000924,2.40e-20,95;UBERON:0006601,2.40e-20,95;UBERON:0003528,8.58e-20,29;UBERON:0002791,8.58e-20,29;UBERON:0001893,8.58e-20,29;UBERON:0003080,1.34e-17,40;UBERON:0010314,2.98e-17,92;UBERON:0010371,4.24e-17,73;UBERON:0002780,4.92e-17,39;UBERON:0001890,4.92e-17,39;UBERON:0006240,4.92e-17,39;UBERON:0003056,1.66e-16,49;UBERON:0000956,8.77e-15,21;UBERON:0001869,8.77e-15,21;UBERON:0000203,8.77e-15,21;UBERON:0002619,1.45e-12,17;UBERON:0002021,1.52e-08,10;UBERON:0000411,1.52e-08,10;UBERON:0001950,1.52e-08,10;UBERON:0003076,3.62e-08,12;UBERON:0003057,3.62e-08,12;UBERON:0000025,1.34e-07,114|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.92616169317078,2.75320128242522,9.38869613217647,9.15705656797875,13.1811709640683,8.74934545834275,4.61955191363696,7.18762821824858,0,0,0,2.57259436035947,1.43266719969378,1.54701627683233,6.27181028664753,7.93486468908049,3.80298842103708,3.04960078862219,5.33576877666684,2.2497492932035,3.9554654502679,2.1314403448383,8.68840320503374,8.83702102239575,5.39185984004084,3.91517221161903,7.15104868594699,11.7116903605559,11.7060326704355,4.40966877173835,4.50473713785711,6.43453150627015,5.50579404996943,5.36286819957788,7.52672012955593,6.59431438650969,7.13603620098795,4.68822033501084,7.53794097303729,7.87867654044352,7.18151764551008,5.30331453852602,5.97961059356232,6.33758115806022,4.08921443999194,2.19157524309678,2.02905142091174,0,2.03991400112325,0,0,0,1.82577746171277,1.1930122580464,1.29893002301434,0.35333957451034,1.12674735821344,3.84979432242953,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,0.258937883647172,5.49235914539852,2.60227990149204,1.82679286987285,3.92046345335299,3.16517545160507,3.05730638552832,3.14166478324189,4.20231445148436,0.86759614151947,0,1.61766849947409,0.883366073841574,0.969750506270444,0,5.85561594023094,5.02672096352292,0.255457055208591,0.239630249011841,0,0,5.99162557619291,9.60751265919116,7.91622418311046,11.8200537730748,14.8314965251592,6.64921742590592,8.92326946872667,2.34230536855727,0.746441823660558,1.76905930903572,0.210441855886474,0.520481771850815,1.60931473103431,1.0803727788321,1.50704817835715,3.53789795586905,3.20284300712124,2.06143794031403,1.29351685369508,2.58681591519411,1.51284864134255,1.23165786914764,1.31517439456545,1.11218899690239,1.39300866608867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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17532 | |||
|HGNC= | |||
|MCL_coexpression_id=620 | |||
|TSSclassifier=NA | |||
|UniProt=O08989,Q3TPX5 | |||
|association_with_transcript=30bp_to_NM_008624,uc009rec.1_5end | |||
|cluster_id=chr9:99337066..99337100,- | |||
|description=CAGE_peak_3_at_Mras_5end | |||
|id=chr9:99337066..99337100,- | |||
|ontology_enrichment_celltype=CL:0002319!2.22e-12!43;CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000055!2.51e-12!50;CL:0000221!3.14e-12!44;CL:0000133!3.14e-12!44;CL:0000393!1.87e-08!39;CL:0000211!1.87e-08!39;CL:0000540!1.14e-07!33;CL:0000047!1.14e-07!33;CL:0000031!1.14e-07!33;CL:0000404!1.14e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.99e-14,23;CL:0000337,8.99e-14,23;CL:0002319,2.72e-12,43;CL:0000221,3.80e-12,44;CL:0000133,3.80e-12,44;CL:0000393,4.17e-08,39;CL:0000211,4.17e-08,39;CL:0000540,3.31e-07,33;CL:0000047,3.31e-07,33;CL:0000031,3.31e-07,33;CL:0000404,3.31e-07,33;CL:0000333,4.74e-07,10;CL:0000095,4.74e-07,10;CL:0000243,4.74e-07,10;CL:0000123,4.74e-07,10;CL:0000125,4.74e-07,10;CL:0000030,4.74e-07,10;CL:0000339,4.74e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.91e-25!75;UBERON:0001016!3.91e-25!75;UBERON:0001017!1.91e-24!73;UBERON:0005743!1.91e-24!73;UBERON:0002346!9.85e-24!71;UBERON:0003075!9.85e-24!71;UBERON:0007284!9.85e-24!71;UBERON:0001049!2.42e-23!52;UBERON:0005068!2.42e-23!52;UBERON:0006241!2.42e-23!52;UBERON:0007135!2.42e-23!52;UBERON:0004121!7.14e-23!102;UBERON:0000924!7.14e-23!102;UBERON:0006601!7.14e-23!102;UBERON:0000955!6.64e-22!50;UBERON:0006238!6.64e-22!50;UBERON:0002616!2.11e-21!49;UBERON:0002020!1.51e-20!34;UBERON:0000033!1.17e-18!63;UBERON:0002791!1.15e-17!29;UBERON:0003528!1.15e-17!29;UBERON:0001893!1.15e-17!29;UBERON:0003080!1.24e-16!40;UBERON:0002780!3.98e-16!39;UBERON:0001890!3.98e-16!39;UBERON:0006240!3.98e-16!39;UBERON:0003056!1.01e-15!49;UBERON:0000956!3.04e-13!21;UBERON:0001869!3.04e-13!21;UBERON:0000203!3.04e-13!21;UBERON:0002619!2.77e-11!17;UBERON:0000025!1.38e-09!114;UBERON:0000153!3.59e-09!94;UBERON:0007811!3.67e-09!86;UBERON:0004111!2.83e-08!122;UBERON:0002021!9.94e-08!10;UBERON:0000411!9.94e-08!10;UBERON:0001950!9.94e-08!10;UBERON:0003076!2.14e-07!12;UBERON:0003057!2.14e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.30e-26,54;UBERON:0001016,1.68e-25,75;UBERON:0001049,4.00e-25,52;UBERON:0005068,4.00e-25,52;UBERON:0006241,4.00e-25,52;UBERON:0007135,4.00e-25,52;UBERON:0001017,9.83e-25,73;UBERON:0002020,4.66e-23,34;UBERON:0002346,3.93e-22,64;UBERON:0003075,3.93e-22,64;UBERON:0007284,3.93e-22,64;UBERON:0000955,1.00e-21,47;UBERON:0006238,1.00e-21,47;UBERON:0002616,3.60e-21,46;UBERON:0004121,2.40e-20,95;UBERON:0000924,2.40e-20,95;UBERON:0006601,2.40e-20,95;UBERON:0003528,8.58e-20,29;UBERON:0002791,8.58e-20,29;UBERON:0001893,8.58e-20,29;UBERON:0003080,1.34e-17,40;UBERON:0010314,2.98e-17,92;UBERON:0010371,4.24e-17,73;UBERON:0002780,4.92e-17,39;UBERON:0001890,4.92e-17,39;UBERON:0006240,4.92e-17,39;UBERON:0003056,1.66e-16,49;UBERON:0000956,8.77e-15,21;UBERON:0001869,8.77e-15,21;UBERON:0000203,8.77e-15,21;UBERON:0002619,1.45e-12,17;UBERON:0002021,1.52e-08,10;UBERON:0000411,1.52e-08,10;UBERON:0001950,1.52e-08,10;UBERON:0003076,3.62e-08,12;UBERON:0003057,3.62e-08,12;UBERON:0000025,1.34e-07,114 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.92616169317078,2.75320128242522,9.38869613217647,9.15705656797875,13.1811709640683,8.74934545834275,4.61955191363696,7.18762821824858,0,0,0,2.57259436035947,1.43266719969378,1.54701627683233,6.27181028664753,7.93486468908049,3.80298842103708,3.04960078862219,5.33576877666684,2.2497492932035,3.9554654502679,2.1314403448383,8.68840320503374,8.83702102239575,5.39185984004084,3.91517221161903,7.15104868594699,11.7116903605559,11.7060326704355,4.40966877173835,4.50473713785711,6.43453150627015,5.50579404996943,5.36286819957788,7.52672012955593,6.59431438650969,7.13603620098795,4.68822033501084,7.53794097303729,7.87867654044352,7.18151764551008,5.30331453852602,5.97961059356232,6.33758115806022,4.08921443999194,2.19157524309678,2.02905142091174,0,2.03991400112325,0,0,0,1.82577746171277,1.1930122580464,1.29893002301434,0.35333957451034,1.12674735821344,3.84979432242953,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,0.258937883647172,5.49235914539852,2.60227990149204,1.82679286987285,3.92046345335299,3.16517545160507,3.05730638552832,3.14166478324189,4.20231445148436,0.86759614151947,0,1.61766849947409,0.883366073841574,0.969750506270444,0,5.85561594023094,5.02672096352292,0.255457055208591,0.239630249011841,0,0,5.99162557619291,9.60751265919116,7.91622418311046,11.8200537730748,14.8314965251592,6.64921742590592,8.92326946872667,2.34230536855727,0.746441823660558,1.76905930903572,0.210441855886474,0.520481771850815,1.60931473103431,1.0803727788321,1.50704817835715,3.53789795586905,3.20284300712124,2.06143794031403,1.29351685369508,2.58681591519411,1.51284864134255,1.23165786914764,1.31517439456545,1.11218899690239,1.39300866608867,1.02891068203972,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,1.37734962223183,0.771335564436891,1.62773761325285,1.07309360559848,0.934122738937356,0.987359099480883,0.656669856316381,1.21603214318784,1.02339991197733,0.658650345873152,0.805238512562231,9.46304768538573,6.38008596751563,0,0,1.06644125267617,1.39342003116263,1.67527699718721,1.00841762311671,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.58489226135736,0,0.432276099749388,0,0.758671603812327,0.342745537829186,3.38123207019241,0.814605311381257,1.55161989734101,1.96380295692892,1.7706230394792,1.18088118383682,0.941992367048249,2.59134044235781,0.889357881261447,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0,0.50925170356284,0,0,0.549122826376163,0,1.11642284300551,0.312037673114561,1.76805214562978,0.717589654087649,0,1.29327233116623,0.37898282354097,0.488894929326078,0.678980343100753,0.938760993154008,0.502518772325447,3.09456733151818,0.975668239288994,1.26108115284953,1.7717175171902,1.2756381492599,0.81931657357869,0.690739927463582,0.867894351489069,1.50791283939272,0,0,0.275936746304732,5.13761887960934,5.39173758324135,2.78689407140348,1.76729649043061,0.94652465824877,0.390438744296638,1.29254038639679,0.238968797952552,0.668396022247182,0.849229592366497,0.404810701674894,0.292255857911312,1.18586333383957,5.46246237917072,6.38730383437209,1.78065603667255,1.46598263418218,2.63952196756057,0,0,0.302323556964751,0.565815239267694,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,0,0.632073515871632,0,0,2.04263763452273,0.36012218806262,1.16422815404479,1.50035924522115,0.709360934569094,1.42695054081656,1.15184314421485,0.913394847343798,3.28540391289194,2.1183207086382,0.882113592219848,0.16488625294148,0.807322133479528,1.20625849856312,0.358117032009409,0.328281799490123,0.582961673259701,5.93360966433631,0.341741761595705,0.412773735926445,0.555583582109135,0.188368457004691,0.410082683163076,0.686334519619568,0.679913719975421,0.139951452323658,0.414599921413271,0,1.10717597753397,0.406638934253697,0.756037385752609,0.627264888043406,0.218362563746178,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0,0,1.34564891439581,1.65458490457098,2.91676782516071,3.22899558694328,3.21016638432478,4.92900402312167,3.3853140059427,0.838874755405687,0.483168241652012,0.288030006257865,0,2.43270258348197,1.02710957164827,1.42912905275575,0.716106782669926,0.993406773906324,0.360586348559907,0.590758108698309,0.100966449948148,0.304827226619999,0.201652370273681,0.38983152295901,0.192423683280659,0.701261413089414,0.453460767230423,0.443971906748129,0.358855426437903,0.671538465456314,1.73870634628971,2.25218970541418,1.64836461840539,0.643105137237198,0,13.5540442228096,7.82552902062201,9.16632821503035,15.1230800462445,7.53590771747707,9.06472676867641,8.77529250301348,10.8077088773813,9.9691329976525,11.39072685854,0.830298780673413,1.19707462020309,1.70733605754134,1.45864030240976,1.04806581313991,3.49302666055027,2.44471400581777,2.06035057238894,1.28367683836726,3.285063752929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| |||
|short_description=p3@Mras | |||
}} |
Latest revision as of 07:43, 27 September 2015
Short description: | p3@Mras |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mras_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 30bp_to_NM_008624, uc009rec.1_5end |
EntrezGene: | Mras |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.99e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.99e-14 | 23 |
neural cell | 2.72e-12 | 43 |
ectodermal cell | 3.80e-12 | 44 |
neurectodermal cell | 3.80e-12 | 44 |
electrically responsive cell | 4.17e-08 | 39 |
electrically active cell | 4.17e-08 | 39 |
neuron | 3.31e-07 | 33 |
neuronal stem cell | 3.31e-07 | 33 |
neuroblast | 3.31e-07 | 33 |
electrically signaling cell | 3.31e-07 | 33 |
migratory neural crest cell | 4.74e-07 | 10 |
neuron associated cell | 4.74e-07 | 10 |
glial cell (sensu Vertebrata) | 4.74e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.74e-07 | 10 |
glial cell | 4.74e-07 | 10 |
glioblast | 4.74e-07 | 10 |
glioblast (sensu Vertebrata) | 4.74e-07 | 10 |