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FFCP PHASE1:Mm9::chr9:60535766..60535781,-: Difference between revisions

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{{FFCP|EntrezGene=102747|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-56bp_to_ENSMUST00000128877_5end|description=CAGE_peak_8_at_Lrrc49_5end|id=chr9:60535766..60535781,-|ontology_enrichment_celltype=CL:0000540!1.33e-08!33;CL:0000047!1.33e-08!33;CL:0000031!1.33e-08!33;CL:0000404!1.33e-08!33;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39;CL:0000117!3.96e-07!23;CL:0000337!3.96e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,7.15e-09,33;CL:0000047,7.15e-09,33;CL:0000031,7.15e-09,33;CL:0000404,7.15e-09,33;CL:0000117,1.29e-08,23;CL:0000337,1.29e-08,23;CL:0002609,1.50e-07,6;CL:0000393,1.53e-07,39;CL:0000211,1.53e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.52e-16!71;UBERON:0003075!1.52e-16!71;UBERON:0007284!1.52e-16!71;UBERON:0001017!2.39e-14!73;UBERON:0005743!2.39e-14!73;UBERON:0000073!3.23e-14!75;UBERON:0001016!3.23e-14!75;UBERON:0001049!1.23e-13!52;UBERON:0005068!1.23e-13!52;UBERON:0006241!1.23e-13!52;UBERON:0007135!1.23e-13!52;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0000033!1.58e-13!63;UBERON:0000955!1.95e-12!50;UBERON:0006238!1.95e-12!50;UBERON:0003056!2.31e-12!49;UBERON:0002616!6.08e-12!49;UBERON:0003080!4.32e-10!40;UBERON:0002780!6.71e-10!39;UBERON:0001890!6.71e-10!39;UBERON:0006240!6.71e-10!39;UBERON:0002020!1.05e-09!34;UBERON:0002791!8.04e-09!29;UBERON:0003528!8.04e-09!29;UBERON:0001893!8.04e-09!29;UBERON:0000153!5.36e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-18,64;UBERON:0003075,1.60e-18,64;UBERON:0007284,1.60e-18,64;UBERON:0010371,1.15e-14,73;UBERON:0001017,1.07e-13,73;UBERON:0004121,5.10e-13,95;UBERON:0000924,5.10e-13,95;UBERON:0006601,5.10e-13,95;UBERON:0001016,5.20e-13,75;UBERON:0001049,6.95e-13,52;UBERON:0005068,6.95e-13,52;UBERON:0006241,6.95e-13,52;UBERON:0007135,6.95e-13,52;UBERON:0003056,3.53e-12,49;UBERON:0000073,6.50e-12,54;UBERON:0000955,1.27e-11,47;UBERON:0006238,1.27e-11,47;UBERON:0010314,1.84e-11,92;UBERON:0002020,3.76e-11,34;UBERON:0002616,6.50e-11,46;UBERON:0003528,7.81e-10,29;UBERON:0002791,7.81e-10,29;UBERON:0001893,7.81e-10,29;UBERON:0002780,2.89e-09,39;UBERON:0001890,2.89e-09,39;UBERON:0006240,2.89e-09,39;UBERON:0003080,7.25e-09,40;UBERON:0000956,1.58e-07,21;UBERON:0001869,1.58e-07,21;UBERON:0000203,1.58e-07,21|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.38121212422995,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,1.5626706890476,0,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,1.54701627683233,1.61853168687678,2.64495489636016,0.633831403506179,1.0165335962074,0,0,0,0,0,0,2.28117147078651,1.21505344498522,2.10324961351382,0.285650984403804,0.441737081903227,2.9397791811589,3.54628242767475,1.83843757322004,0,0.893811366596314,1.0752457327937,0.527545150920775,1.73826522844578,2.08365348222704,1.67509799400829,0.56276261003168,0.763991238884051,1.47314292736834,1.85083185038834,2.23679334990361,0.530083353332288,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0.852151612890289,1.29893002301434,0.35333957451034,0,1.28326477414318,0,0,0.432982082022428,0,0,0.34255163915718,0.517875767294343,0.742210695324124,0.693941307064543,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.628332956648377,0,0,0,0.485300549842228,0.220841518460394,0,0,1.46390398505774,2.51336048176146,0.766371165625774,0.11981512450592,1.79970819298022,0.127070227073065,0.898743836428936,1.37250180845588,2.51308704225729,0.869121600961382,2.04572365864264,1.24672826735736,1.46017136760982,0.81471491080253,0.124406970610093,0,0,1.30120442962704,1.14951052216736,0.900310649026746,1.65775299619287,1.02054748726992,1.66547836370305,1.40552586839593,1.55222022443409,3.44908788692548,2.45837904218165,1.93546236580344,1.53437012699302,0.834141747676794,0,1.23469281844766,0.59710280045548,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.720248245844059,0.23674473558521,1.57411385397923,1.23413690309903,0.930135779001631,0.536546802799238,0.817357396570186,0.822799249567402,0.492502392237286,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,2.3131894342054,1.13195073617213,0,0.528901133327089,1.49301775374664,0.464473343720877,0.644337306610467,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,1.36474860983384,0,0.216138049874694,0,0.189667900953082,0.913988100877831,2.25415471346161,0.407302655690628,0.775809948670503,0,0.69560190836683,0.590440591918409,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0.757965647081939,0.651859905768103,0.509235257325564,1.17345124144251,0,0.714130922658041,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=102747
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-56bp_to_ENSMUST00000128877_5end
|cluster_id=chr9:60535766..60535781,-
|description=CAGE_peak_8_at_Lrrc49_5end
|id=chr9:60535766..60535781,-
|ontology_enrichment_celltype=CL:0000540!1.33e-08!33;CL:0000047!1.33e-08!33;CL:0000031!1.33e-08!33;CL:0000404!1.33e-08!33;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39;CL:0000117!3.96e-07!23;CL:0000337!3.96e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,7.15e-09,33;CL:0000047,7.15e-09,33;CL:0000031,7.15e-09,33;CL:0000404,7.15e-09,33;CL:0000117,1.29e-08,23;CL:0000337,1.29e-08,23;CL:0002609,1.50e-07,6;CL:0000393,1.53e-07,39;CL:0000211,1.53e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.52e-16!71;UBERON:0003075!1.52e-16!71;UBERON:0007284!1.52e-16!71;UBERON:0001017!2.39e-14!73;UBERON:0005743!2.39e-14!73;UBERON:0000073!3.23e-14!75;UBERON:0001016!3.23e-14!75;UBERON:0001049!1.23e-13!52;UBERON:0005068!1.23e-13!52;UBERON:0006241!1.23e-13!52;UBERON:0007135!1.23e-13!52;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0000033!1.58e-13!63;UBERON:0000955!1.95e-12!50;UBERON:0006238!1.95e-12!50;UBERON:0003056!2.31e-12!49;UBERON:0002616!6.08e-12!49;UBERON:0003080!4.32e-10!40;UBERON:0002780!6.71e-10!39;UBERON:0001890!6.71e-10!39;UBERON:0006240!6.71e-10!39;UBERON:0002020!1.05e-09!34;UBERON:0002791!8.04e-09!29;UBERON:0003528!8.04e-09!29;UBERON:0001893!8.04e-09!29;UBERON:0000153!5.36e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-18,64;UBERON:0003075,1.60e-18,64;UBERON:0007284,1.60e-18,64;UBERON:0010371,1.15e-14,73;UBERON:0001017,1.07e-13,73;UBERON:0004121,5.10e-13,95;UBERON:0000924,5.10e-13,95;UBERON:0006601,5.10e-13,95;UBERON:0001016,5.20e-13,75;UBERON:0001049,6.95e-13,52;UBERON:0005068,6.95e-13,52;UBERON:0006241,6.95e-13,52;UBERON:0007135,6.95e-13,52;UBERON:0003056,3.53e-12,49;UBERON:0000073,6.50e-12,54;UBERON:0000955,1.27e-11,47;UBERON:0006238,1.27e-11,47;UBERON:0010314,1.84e-11,92;UBERON:0002020,3.76e-11,34;UBERON:0002616,6.50e-11,46;UBERON:0003528,7.81e-10,29;UBERON:0002791,7.81e-10,29;UBERON:0001893,7.81e-10,29;UBERON:0002780,2.89e-09,39;UBERON:0001890,2.89e-09,39;UBERON:0006240,2.89e-09,39;UBERON:0003080,7.25e-09,40;UBERON:0000956,1.58e-07,21;UBERON:0001869,1.58e-07,21;UBERON:0000203,1.58e-07,21
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.38121212422995,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,1.5626706890476,0,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,1.54701627683233,1.61853168687678,2.64495489636016,0.633831403506179,1.0165335962074,0,0,0,0,0,0,2.28117147078651,1.21505344498522,2.10324961351382,0.285650984403804,0.441737081903227,2.9397791811589,3.54628242767475,1.83843757322004,0,0.893811366596314,1.0752457327937,0.527545150920775,1.73826522844578,2.08365348222704,1.67509799400829,0.56276261003168,0.763991238884051,1.47314292736834,1.85083185038834,2.23679334990361,0.530083353332288,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0.852151612890289,1.29893002301434,0.35333957451034,0,1.28326477414318,0,0,0.432982082022428,0,0,0.34255163915718,0.517875767294343,0.742210695324124,0.693941307064543,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.628332956648377,0,0,0,0.485300549842228,0.220841518460394,0,0,1.46390398505774,2.51336048176146,0.766371165625774,0.11981512450592,1.79970819298022,0.127070227073065,0.898743836428936,1.37250180845588,2.51308704225729,0.869121600961382,2.04572365864264,1.24672826735736,1.46017136760982,0.81471491080253,0.124406970610093,0,0,1.30120442962704,1.14951052216736,0.900310649026746,1.65775299619287,1.02054748726992,1.66547836370305,1.40552586839593,1.55222022443409,3.44908788692548,2.45837904218165,1.93546236580344,1.53437012699302,0.834141747676794,0,1.23469281844766,0.59710280045548,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.720248245844059,0.23674473558521,1.57411385397923,1.23413690309903,0.930135779001631,0.536546802799238,0.817357396570186,0.822799249567402,0.492502392237286,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,2.3131894342054,1.13195073617213,0,0.528901133327089,1.49301775374664,0.464473343720877,0.644337306610467,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,1.36474860983384,0,0.216138049874694,0,0.189667900953082,0.913988100877831,2.25415471346161,0.407302655690628,0.775809948670503,0,0.69560190836683,0.590440591918409,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0.757965647081939,0.651859905768103,0.509235257325564,1.17345124144251,0,0.714130922658041,0,0.472905432318573,0.664394068946325,0.478364305972461,1.14704320301017,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0.551873492609465,1.44495530989013,2.57865710502847,0.655739781506702,0.252470927204373,1.57754109708128,1.56175497718655,1.07711698866399,0.955875191810208,1.11399337041197,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,1.60660658210904,0.99358059645788,0.712262414669021,0.162886959353576,0.824850614862677,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0,0.775284879504663,0.363533729477506,0,0,0,0,0.680879211507576,1.26042765821917,0.776152102696527,0.643011105094777,0.354680467284547,0.713475270408282,0.493647061806363,1.2178597964584,1.17335854031855,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,0.422190474497091,0.119372344003136,0.656563598980245,0.291480836629851,1.29797711407357,0.170870880797853,0.412773735926445,0,0,0,0,0.679913719975421,0.69975726161829,0.690999869022119,0,0.158167996790568,0.813277868507395,0.648032044930808,0.209088296014469,0.655087691238533,0.944050424693745,0.743881101528023,0,0.129614973291793,0.621339313086926,18.0381740378941,0.299033092087958,0.165458490457098,0,0.387479470433193,0.506868376472335,0.704143431874524,0.651021924219751,0.838874755405687,3.8653459332161,8.64090018773596,0,0.608175645870493,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0,0.443068581523732,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,1.12609485270709,0.549454872801795,0.428736758158132,1.00314420807073,1.6942555278512,1.38097570952153,0,1.3748254587495,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,1.14166082342594,1.19707462020309,1.19513524027894,0.972426868273176,0.628839487883947,0.551530525350042,0.666740183404846,1.23621034343337,1.28367683836726,0.505394423527595,1.52087579934144,2.07488975524684,0.749132059759059,1.28050304809739,1.20614484806788,0.952587382566147,0.695305955669133,0.192909220463705,0.824171801606613,1.47198920134397,1.71434626192708,0.887379030796687,0.238436189947321,1.0174249164263,0.941093804153306,1.01537529470012,1.46342378298218,1.8414879800649,0.135804113845862,0,0.474540072496697,0.886540341380071,1.22769312950907,0.929621047115796,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.882365676478062,0.463735671240843
|short_description=p8@Lrrc49
}}

Latest revision as of 22:56, 26 September 2015

Short description:p8@Lrrc49
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Lrrc49_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -56bp_to_ENSMUST00000128877_5end
EntrezGene:Lrrc49
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Lrrc49

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.60e-1864
neural plate1.60e-1864
presumptive neural plate1.60e-1864
ecto-epithelium1.15e-1473
central nervous system1.07e-1373
ectoderm-derived structure5.10e-1395
ectoderm5.10e-1395
presumptive ectoderm5.10e-1395
nervous system5.20e-1375
neural tube6.95e-1352
neural rod6.95e-1352
future spinal cord6.95e-1352
neural keel6.95e-1352
pre-chordal neural plate3.53e-1249
regional part of nervous system6.50e-1254
brain1.27e-1147
future brain1.27e-1147
structure with developmental contribution from neural crest1.84e-1192
gray matter3.76e-1134
regional part of brain6.50e-1146
brain grey matter7.81e-1029
regional part of telencephalon7.81e-1029
telencephalon7.81e-1029
regional part of forebrain2.89e-0939
forebrain2.89e-0939
future forebrain2.89e-0939
anterior neural tube7.25e-0940
cerebral cortex1.58e-0721
cerebral hemisphere1.58e-0721
pallium1.58e-0721
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