FFCP PHASE1:Mm9::chr9:40183706..40183724,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=28|UniProt=|association_with_transcript=227bp_to_ENSMUST00000149492_5end|description=CAGE_peak_29_at_Gramd1b_5end|id=chr9:40183706..40183724,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.47e-23!63;UBERON:0002346!3.83e-18!71;UBERON:0003075!3.83e-18!71;UBERON:0007284!3.83e-18!71;UBERON:0000955!6.01e-18!50;UBERON:0006238!6.01e-18!50;UBERON:0002616!1.10e-16!49;UBERON:0004121!1.17e-16!102;UBERON:0000924!1.17e-16!102;UBERON:0006601!1.17e-16!102;UBERON:0001049!3.51e-15!52;UBERON:0005068!3.51e-15!52;UBERON:0006241!3.51e-15!52;UBERON:0007135!3.51e-15!52;UBERON:0007811!5.77e-15!86;UBERON:0001017!8.26e-15!73;UBERON:0005743!8.26e-15!73;UBERON:0003056!1.00e-14!49;UBERON:0000073!3.30e-14!75;UBERON:0001016!3.30e-14!75;UBERON:0000153!5.63e-13!94;UBERON:0002298!1.84e-11!6;UBERON:0003080!1.66e-09!40;UBERON:0002791!2.50e-09!29;UBERON:0003528!2.50e-09!29;UBERON:0001893!2.50e-09!29;UBERON:0002020!1.29e-08!34;UBERON:0002780!1.88e-08!39;UBERON:0001890!1.88e-08!39;UBERON:0006240!1.88e-08!39;UBERON:0004733!2.07e-08!6;UBERON:0004732!2.07e-08!6;UBERON:0002028!2.07e-08!6;UBERON:0007277!2.07e-08!6;UBERON:0002950!6.23e-08!4;UBERON:0001891!6.23e-08!4;UBERON:0009616!6.23e-08!4;UBERON:0002619!3.23e-07!17;UBERON:0000970!4.07e-07!9;UBERON:0000019!4.07e-07!9;UBERON:0000047!4.07e-07!9;UBERON:0004088!4.07e-07!9;UBERON:0002104!4.07e-07!9;UBERON:0001456!4.07e-07!9;UBERON:0003072!4.07e-07!9;UBERON:0003071!4.07e-07!9;UBERON:0004128!4.07e-07!9;UBERON:0003076!4.16e-07!12;UBERON:0003057!4.16e-07!12;UBERON:0000956!6.08e-07!21;UBERON:0001869!6.08e-07!21;UBERON:0000203!6.08e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.33e-14,64;UBERON:0003075,3.33e-14,64;UBERON:0007284,3.33e-14,64;UBERON:0010371,2.61e-12,73;UBERON:0001049,5.44e-12,52;UBERON:0005068,5.44e-12,52;UBERON:0006241,5.44e-12,52;UBERON:0007135,5.44e-12,52;UBERON:0004733,4.04e-11,6;UBERON:0004732,4.04e-11,6;UBERON:0002028,4.04e-11,6;UBERON:0007277,4.04e-11,6;UBERON:0002616,4.42e-11,46;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000955,7.95e-11,47;UBERON:0006238,7.95e-11,47;UBERON:0001017,4.30e-10,73;UBERON:0001016,8.59e-10,75;UBERON:0010314,1.63e-09,92;UBERON:0003076,1.90e-09,12;UBERON:0003057,1.90e-09,12;UBERON:0000073,2.63e-09,54;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1;UBERON:0003056,3.60e-08,49;UBERON:0002037,5.65e-08,4;UBERON:0002680,5.65e-08,4;UBERON:0001895,5.65e-08,4;UBERON:0010092,5.65e-08,4;UBERON:0006215,5.65e-08,4;UBERON:0007023,7.69e-08,51;UBERON:0002950,1.23e-07,4;UBERON:0001891,1.23e-07,4;UBERON:0009616,1.23e-07,4;UBERON:0010286,1.23e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.921639199537461,0,0,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,6.73395833126558,4.60782754989601,0,0,0,0,1.49790639404823,0.457500602818626,0,1.04294592115366,0.511430914660661,1.45451631191692,0.648965052271031,0.101839363850316,0,0,15.5726973355991,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0.562210347358373,11.9003550539947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p29@Gramd1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=227bp_to_ENSMUST00000149492_5end | |||
|cluster_id=chr9:40183706..40183724,- | |||
|description=CAGE_peak_29_at_Gramd1b_5end | |||
|id=chr9:40183706..40183724,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.47e-23!63;UBERON:0002346!3.83e-18!71;UBERON:0003075!3.83e-18!71;UBERON:0007284!3.83e-18!71;UBERON:0000955!6.01e-18!50;UBERON:0006238!6.01e-18!50;UBERON:0002616!1.10e-16!49;UBERON:0004121!1.17e-16!102;UBERON:0000924!1.17e-16!102;UBERON:0006601!1.17e-16!102;UBERON:0001049!3.51e-15!52;UBERON:0005068!3.51e-15!52;UBERON:0006241!3.51e-15!52;UBERON:0007135!3.51e-15!52;UBERON:0007811!5.77e-15!86;UBERON:0001017!8.26e-15!73;UBERON:0005743!8.26e-15!73;UBERON:0003056!1.00e-14!49;UBERON:0000073!3.30e-14!75;UBERON:0001016!3.30e-14!75;UBERON:0000153!5.63e-13!94;UBERON:0002298!1.84e-11!6;UBERON:0003080!1.66e-09!40;UBERON:0002791!2.50e-09!29;UBERON:0003528!2.50e-09!29;UBERON:0001893!2.50e-09!29;UBERON:0002020!1.29e-08!34;UBERON:0002780!1.88e-08!39;UBERON:0001890!1.88e-08!39;UBERON:0006240!1.88e-08!39;UBERON:0004733!2.07e-08!6;UBERON:0004732!2.07e-08!6;UBERON:0002028!2.07e-08!6;UBERON:0007277!2.07e-08!6;UBERON:0002950!6.23e-08!4;UBERON:0001891!6.23e-08!4;UBERON:0009616!6.23e-08!4;UBERON:0002619!3.23e-07!17;UBERON:0000970!4.07e-07!9;UBERON:0000019!4.07e-07!9;UBERON:0000047!4.07e-07!9;UBERON:0004088!4.07e-07!9;UBERON:0002104!4.07e-07!9;UBERON:0001456!4.07e-07!9;UBERON:0003072!4.07e-07!9;UBERON:0003071!4.07e-07!9;UBERON:0004128!4.07e-07!9;UBERON:0003076!4.16e-07!12;UBERON:0003057!4.16e-07!12;UBERON:0000956!6.08e-07!21;UBERON:0001869!6.08e-07!21;UBERON:0000203!6.08e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.33e-14,64;UBERON:0003075,3.33e-14,64;UBERON:0007284,3.33e-14,64;UBERON:0010371,2.61e-12,73;UBERON:0001049,5.44e-12,52;UBERON:0005068,5.44e-12,52;UBERON:0006241,5.44e-12,52;UBERON:0007135,5.44e-12,52;UBERON:0004733,4.04e-11,6;UBERON:0004732,4.04e-11,6;UBERON:0002028,4.04e-11,6;UBERON:0007277,4.04e-11,6;UBERON:0002616,4.42e-11,46;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000955,7.95e-11,47;UBERON:0006238,7.95e-11,47;UBERON:0001017,4.30e-10,73;UBERON:0001016,8.59e-10,75;UBERON:0010314,1.63e-09,92;UBERON:0003076,1.90e-09,12;UBERON:0003057,1.90e-09,12;UBERON:0000073,2.63e-09,54;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1;UBERON:0003056,3.60e-08,49;UBERON:0002037,5.65e-08,4;UBERON:0002680,5.65e-08,4;UBERON:0001895,5.65e-08,4;UBERON:0010092,5.65e-08,4;UBERON:0006215,5.65e-08,4;UBERON:0007023,7.69e-08,51;UBERON:0002950,1.23e-07,4;UBERON:0001891,1.23e-07,4;UBERON:0009616,1.23e-07,4;UBERON:0010286,1.23e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.921639199537461,0,0,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,6.73395833126558,4.60782754989601,0,0,0,0,1.49790639404823,0.457500602818626,0,1.04294592115366,0.511430914660661,1.45451631191692,0.648965052271031,0.101839363850316,0,0,15.5726973355991,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0.562210347358373,11.9003550539947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p29@Gramd1b | |||
}} |
Latest revision as of 15:10, 26 September 2015
Short description: | p29@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 227bp_to_ENSMUST00000149492_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data