FFCP PHASE1:Mm9::chr8:87380881..87380935,+: Difference between revisions
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{{FFCP|EntrezGene=66590|HGNC=|MCL_coexpression_id=155|UniProt=Q8C0C7,Q8BJG2,E9PWY9,D6RIJ2,E9Q319|association_with_transcript=0bp_to_ENSMUST00000003906,ENSMUST00000095222,ENSMUST00000109754,ENSMUST00000129595,ENSMUST00000144404,ENSMUST00000156970,ENSMUST00000169049,NM_025648,uc009mnr.2,uc009mns.2,uc009mnt.2,uc009mnu.2_5end|description=CAGE_peak_1_at_Farsa_5end|id=chr8:87380881..87380935,+|ontology_enrichment_celltype=CL:0000548!6.47e-27!115;CL:0000004!6.47e-27!115;CL:0000255!6.47e-27!115;CL:0000144!2.09e-25!121;CL:0000012!2.09e-25!121;CL:0002371!2.00e-24!118;CL:0000034!2.32e-22!97;CL:0000723!3.35e-20!91;CL:0000048!3.35e-20!91;CL:0000219!2.76e-18!54;CL:0002320!7.73e-16!46;CL:0000134!7.73e-16!46;CL:0000063!2.28e-15!66;CL:0000988!3.19e-15!32;CL:0002032!3.19e-15!32;CL:0000037!3.19e-15!32;CL:0000566!3.19e-15!32;CL:0000837!3.19e-15!32;CL:0002031!3.36e-11!25;CL:0000221!6.31e-11!44;CL:0000133!6.31e-11!44;CL:0002319!1.55e-10!43;CL:0000055!1.28e-09!50;CL:0000049!1.74e-09!19;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70;CL:0000738!2.72e-08!17;CL:0002087!2.72e-08!17;CL:0000763!1.18e-07!16;CL:0000540!1.80e-07!33;CL:0000047!1.80e-07!33;CL:0000031!1.80e-07!33;CL:0000404!1.80e-07!33;CL:0000542!6.71e-07!13;CL:0000051!6.71e-07!13;CL:0000838!8.04e-07!12|ontology_enrichment_celltype_v019_2=CL:0000034,2.32e-22,97;CL:0000723,3.35e-20,91;CL:0000048,3.35e-20,91;CL:0000219,2.76e-18,54;CL:0002320,7.73e-16,46;CL:0000134,7.73e-16,46;CL:0000988,3.19e-15,32;CL:0002032,3.19e-15,32;CL:0000037,3.19e-15,32;CL:0000837,3.19e-15,32;CL:0002031,3.36e-11,25;CL:0000221,6.31e-11,44;CL:0000133,6.31e-11,44;CL:0002319,1.55e-10,43;CL:0000049,1.74e-09,19;CL:0002321,2.83e-09,70;CL:0000738,2.72e-08,17;CL:0002087,2.72e-08,17;CL:0000763,1.18e-07,16;CL:0000540,1.80e-07,33;CL:0000047,1.80e-07,33;CL:0000031,1.80e-07,33;CL:0000404,1.80e-07,33;CL:0000542,6.71e-07,13;CL:0000051,6.71e-07,13;CL:0000838,8.04e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.73e-16!46;UBERON:0002371!1.86e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.73e-16,46;UBERON:0002371,1.86e-07,16|phase1_expression=35.8733417514738,16.0528687514106,22.2949627300873,24.1971369045464,23.5420993074783,39.4516288992941,37.8452477764752,37.0583938277324,63.4957136904017,97.1367784236273,56.8443654508677,75.5442345685836,27.2209160590617,40.0385443079008,44.6367080832988,49.4039652431175,51.0680171033547,26.6565529727711,21.526966076101,28.00971701867,20.8356060870121,38.7234709683453,49.1055603581199,21.1189998087297,22.2527002635155,17.8011908875656,23.6919097887491,29.7350301106527,20.9025761402011,18.9022597319948,27.4945833212578,112.400429202355,112.556856127976,47.5445043046316,25.7077941578634,32.9144597809815,28.5837098767317,10.0447591376858,17.9707129240474,11.5175223674236,8.82347232046521,8.87959130445979,7.2826552954673,23.2909113254818,21.6946632809761,21.4749700029167,50.0730460382745,45.7852828398938,32.9529274101708,32.6642230444796,30.3770534927037,38.8131923785423,37.9188689690484,38.4441935266013,34.9537551108163,28.0412785279182,25.5014761545493,19.0798674142654,42.8910897022347,50.2541430308431,58.9463205260747,46.7605454255402,39.1289710288901,54.8938827541653,48.4544517657817,44.0497671266582,40.745615030503,41.8797952800494,36.7061227572011,44.1469418344628,42.6959671543305,33.1355141908412,41.5232856989033,36.1347857684114,45.5265987336623,55.1531271966013,14.3150645299205,22.0899094887375,20.8904885228491,41.9398394982016,48.4884511092771,42.7148963856543,20.6595419261022,20.8222165711722,19.0997809721013,32.1145158166298,35.3081768381775,34.8566963693312,37.4087395065929,20.9333221495796,30.7256358023778,29.2544118173671,29.918738683141,20.5087212822371,21.4426217757731,14.7848872742121,22.049773960685,21.8150812899914,25.9786004602869,27.2071472372962,37.7460365001504,10.2661181931454,35.6727335589304,42.6640021891999,25.7624338803345,23.5624674891842,21.7375511356357,14.3871688446016,14.7594593678888,20.336573051881,30.706902837606,29.5331513962777,26.5207821844467,23.3620092856565,17.0503625346772,25.8873178139131,14.8316980640624,8.82056077211461,29.1921482143459,15.6913844448987,19.654895142975,24.2437626567611,11.1835056730873,20.7874365878198,23.0391377494801,18.3929079750186,51.7601337865576,61.1900785613276,50.4468801480067,14.9790639404823,18.7575247155637,24.6282530141214,15.1227158567281,23.2701066170601,17.2464076984435,21.7403292510795,16.09061948835,20.6515571212754,13.8997517138521,17.6771158944638,26.4144499214289,29.8872735763515,23.5881390045007,23.5099515823715,19.7305847538851,19.9857403644366,24.9246587328879,22.7658966250334,38.3711027420459,25.7184269028234,26.9205219970842,27.6186622858744,17.7950239504383,14.626590993931,20.3724315043864,30.253208556411,90.5855011634073,82.0939823695941,60.2426618718656,23.1980865239762,21.5763975182609,21.7875094367828,18.7028341112316,21.2505370287196,18.8205877722601,19.3003174142839,23.3397859217669,16.4639132737709,18.2661433403963,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66590 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C0C7,Q8BJG2,E9PWY9,D6RIJ2,E9Q319 | |||
|association_with_transcript=0bp_to_ENSMUST00000003906,ENSMUST00000095222,ENSMUST00000109754,ENSMUST00000129595,ENSMUST00000144404,ENSMUST00000156970,ENSMUST00000169049,NM_025648,uc009mnr.2,uc009mns.2,uc009mnt.2,uc009mnu.2_5end | |||
|cluster_id=chr8:87380881..87380935,+ | |||
|description=CAGE_peak_1_at_Farsa_5end | |||
|id=chr8:87380881..87380935,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.47e-27!115;CL:0000004!6.47e-27!115;CL:0000255!6.47e-27!115;CL:0000144!2.09e-25!121;CL:0000012!2.09e-25!121;CL:0002371!2.00e-24!118;CL:0000034!2.32e-22!97;CL:0000723!3.35e-20!91;CL:0000048!3.35e-20!91;CL:0000219!2.76e-18!54;CL:0002320!7.73e-16!46;CL:0000134!7.73e-16!46;CL:0000063!2.28e-15!66;CL:0000988!3.19e-15!32;CL:0002032!3.19e-15!32;CL:0000037!3.19e-15!32;CL:0000566!3.19e-15!32;CL:0000837!3.19e-15!32;CL:0002031!3.36e-11!25;CL:0000221!6.31e-11!44;CL:0000133!6.31e-11!44;CL:0002319!1.55e-10!43;CL:0000055!1.28e-09!50;CL:0000049!1.74e-09!19;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70;CL:0000738!2.72e-08!17;CL:0002087!2.72e-08!17;CL:0000763!1.18e-07!16;CL:0000540!1.80e-07!33;CL:0000047!1.80e-07!33;CL:0000031!1.80e-07!33;CL:0000404!1.80e-07!33;CL:0000542!6.71e-07!13;CL:0000051!6.71e-07!13;CL:0000838!8.04e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.32e-22,97;CL:0000723,3.35e-20,91;CL:0000048,3.35e-20,91;CL:0000219,2.76e-18,54;CL:0002320,7.73e-16,46;CL:0000134,7.73e-16,46;CL:0000988,3.19e-15,32;CL:0002032,3.19e-15,32;CL:0000037,3.19e-15,32;CL:0000837,3.19e-15,32;CL:0002031,3.36e-11,25;CL:0000221,6.31e-11,44;CL:0000133,6.31e-11,44;CL:0002319,1.55e-10,43;CL:0000049,1.74e-09,19;CL:0002321,2.83e-09,70;CL:0000738,2.72e-08,17;CL:0002087,2.72e-08,17;CL:0000763,1.18e-07,16;CL:0000540,1.80e-07,33;CL:0000047,1.80e-07,33;CL:0000031,1.80e-07,33;CL:0000404,1.80e-07,33;CL:0000542,6.71e-07,13;CL:0000051,6.71e-07,13;CL:0000838,8.04e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.73e-16!46;UBERON:0002371!1.86e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.73e-16,46;UBERON:0002371,1.86e-07,16 | |||
|phase1_expression=35.8733417514738,16.0528687514106,22.2949627300873,24.1971369045464,23.5420993074783,39.4516288992941,37.8452477764752,37.0583938277324,63.4957136904017,97.1367784236273,56.8443654508677,75.5442345685836,27.2209160590617,40.0385443079008,44.6367080832988,49.4039652431175,51.0680171033547,26.6565529727711,21.526966076101,28.00971701867,20.8356060870121,38.7234709683453,49.1055603581199,21.1189998087297,22.2527002635155,17.8011908875656,23.6919097887491,29.7350301106527,20.9025761402011,18.9022597319948,27.4945833212578,112.400429202355,112.556856127976,47.5445043046316,25.7077941578634,32.9144597809815,28.5837098767317,10.0447591376858,17.9707129240474,11.5175223674236,8.82347232046521,8.87959130445979,7.2826552954673,23.2909113254818,21.6946632809761,21.4749700029167,50.0730460382745,45.7852828398938,32.9529274101708,32.6642230444796,30.3770534927037,38.8131923785423,37.9188689690484,38.4441935266013,34.9537551108163,28.0412785279182,25.5014761545493,19.0798674142654,42.8910897022347,50.2541430308431,58.9463205260747,46.7605454255402,39.1289710288901,54.8938827541653,48.4544517657817,44.0497671266582,40.745615030503,41.8797952800494,36.7061227572011,44.1469418344628,42.6959671543305,33.1355141908412,41.5232856989033,36.1347857684114,45.5265987336623,55.1531271966013,14.3150645299205,22.0899094887375,20.8904885228491,41.9398394982016,48.4884511092771,42.7148963856543,20.6595419261022,20.8222165711722,19.0997809721013,32.1145158166298,35.3081768381775,34.8566963693312,37.4087395065929,20.9333221495796,30.7256358023778,29.2544118173671,29.918738683141,20.5087212822371,21.4426217757731,14.7848872742121,22.049773960685,21.8150812899914,25.9786004602869,27.2071472372962,37.7460365001504,10.2661181931454,35.6727335589304,42.6640021891999,25.7624338803345,23.5624674891842,21.7375511356357,14.3871688446016,14.7594593678888,20.336573051881,30.706902837606,29.5331513962777,26.5207821844467,23.3620092856565,17.0503625346772,25.8873178139131,14.8316980640624,8.82056077211461,29.1921482143459,15.6913844448987,19.654895142975,24.2437626567611,11.1835056730873,20.7874365878198,23.0391377494801,18.3929079750186,51.7601337865576,61.1900785613276,50.4468801480067,14.9790639404823,18.7575247155637,24.6282530141214,15.1227158567281,23.2701066170601,17.2464076984435,21.7403292510795,16.09061948835,20.6515571212754,13.8997517138521,17.6771158944638,26.4144499214289,29.8872735763515,23.5881390045007,23.5099515823715,19.7305847538851,19.9857403644366,24.9246587328879,22.7658966250334,38.3711027420459,25.7184269028234,26.9205219970842,27.6186622858744,17.7950239504383,14.626590993931,20.3724315043864,30.253208556411,90.5855011634073,82.0939823695941,60.2426618718656,23.1980865239762,21.5763975182609,21.7875094367828,18.7028341112316,21.2505370287196,18.8205877722601,19.3003174142839,23.3397859217669,16.4639132737709,18.2661433403963,16.0884114797513,13.4574223846121,15.9357986293612,16.2467085315377,15.2995317386824,19.3466752678997,25.1087254205454,8.92130714056255,28.5606611996628,29.2204903233271,26.47498059209,21.3919985794675,19.5633018884642,19.5692678583486,16.7398550979052,15.1849299694244,14.822905925161,15.834118154417,14.1259095149217,10.9179888786707,16.178749355776,12.3198688428576,10.9527700289902,27.6915135391499,27.0768974885057,16.9061603509621,20.3651327845314,24.2440608959532,17.0430042333474,13.7223285559638,13.5801336141234,14.2868842335651,13.5736880313981,16.6013471168803,37.5401487861212,43.8326559102443,39.8005938921191,33.87764027188,37.623636921377,29.7912246584261,29.6327021574335,18.6455510791291,17.8464918572253,25.8782771749238,10.7920874823866,18.4102227137591,13.8918382870911,19.7337154874103,17.8504102904446,13.1174765018289,32.0240485892119,27.0521860893763,22.0668611507745,25.1118565668697,18.0906758037161,16.1869675802489,16.0009591243395,13.0837169608139,14.3952048271704,13.7131101045439,13.6006551214063,14.850908440467,15.4774492682217,40.7136466636035,27.7391898747542,26.555270743028,19.3155722413313,18.1422166686205,18.5194464815681,27.0492659871514,14.3908428506493,29.6577726251281,33.1872932652143,34.8985904327134,27.9593493604486,34.0881971346063,26.8922704249391,40.0762594658145,30.9791209385991,22.1361155650053,16.0660658210904,17.3166903954088,25.9975781354193,14.6598263418218,16.6619824202261,29.2039304347918,32.7753858809225,35.3718561648759,27.724946724117,34.8456233599312,35.3550420135517,27.9102556621679,18.1766864738753,22.4593348382374,25.2829406348653,39.0048851727495,27.8465966770104,18.7241783164583,26.10885863454,34.4094098862127,29.3641737993281,24.8276327099183,24.4365280114837,24.6823530903181,28.0107753185431,17.6003781047783,22.6660315824288,19.6270274268916,20.610781617685,11.6254387221052,14.5354149076856,20.1739261365301,18.712062570937,15.1570035047522,13.3506217447567,28.8771788548371,22.0833948720648,29.2607353244144,35.978375287896,28.5690935936943,28.1397153044023,32.8058369888141,27.9902904647316,31.5095940274086,13.3653886522116,29.2610794062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| |||
|short_description=p1@Farsa | |||
}} |
Latest revision as of 22:01, 25 September 2015
Short description: | p1@Farsa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Farsa_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000003906, ENSMUST00000095222, ENSMUST00000109754, ENSMUST00000129595, ENSMUST00000144404, ENSMUST00000156970, ENSMUST00000169049, NM_025648, uc009mnr.2, uc009mns.2, uc009mnt.2, uc009mnu.2_5end |
EntrezGene: | Farsa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.32e-22 | 97 |
somatic stem cell | 3.35e-20 | 91 |
multi fate stem cell | 3.35e-20 | 91 |
motile cell | 2.76e-18 | 54 |
connective tissue cell | 7.73e-16 | 46 |
mesenchymal cell | 7.73e-16 | 46 |
hematopoietic cell | 3.19e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.19e-15 | 32 |
hematopoietic stem cell | 3.19e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.19e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 3.36e-11 | 25 |
ectodermal cell | 6.31e-11 | 44 |
neurectodermal cell | 6.31e-11 | 44 |
neural cell | 1.55e-10 | 43 |
common myeloid progenitor | 1.74e-09 | 19 |
embryonic cell | 2.83e-09 | 70 |
leukocyte | 2.72e-08 | 17 |
nongranular leukocyte | 2.72e-08 | 17 |
myeloid cell | 1.18e-07 | 16 |
neuron | 1.80e-07 | 33 |
neuronal stem cell | 1.80e-07 | 33 |
neuroblast | 1.80e-07 | 33 |
electrically signaling cell | 1.80e-07 | 33 |
lymphocyte | 6.71e-07 | 13 |
common lymphoid progenitor | 6.71e-07 | 13 |
lymphoid lineage restricted progenitor cell | 8.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.73e-16 | 46 |
bone marrow | 1.86e-07 | 16 |