FFCP PHASE1:Mm9::chr8:80134496..80134542,-: Difference between revisions
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{{FFCP|EntrezGene=234463|HGNC=|UniProt=Q3TPR7|association_with_transcript=9bp_to_ENSMUST00000034030,NM_145599,uc009mhr.2_5end|description=CAGE_peak_1_at_Tmem184c_5end|id=chr8:80134496..80134542,-|ontology_enrichment_celltype=CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000540!2.53e-10!33;CL:0000047!2.53e-10!33;CL:0000031!2.53e-10!33;CL:0000404!2.53e-10!33;CL:0000055!1.52e-09!50;CL:0000221!1.90e-07!44;CL:0000133!1.90e-07!44;CL:0002319!3.21e-07!43|ontology_enrichment_celltype_v019_2=CL:0000393,4.67e-13,39;CL:0000211,4.67e-13,39;CL:0000540,2.53e-10,33;CL:0000047,2.53e-10,33;CL:0000031,2.53e-10,33;CL:0000404,2.53e-10,33;CL:0000221,1.90e-07,44;CL:0000133,1.90e-07,44;CL:0002319,3.21e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.05e-18!75;UBERON:0001016!1.05e-18!75;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0001017!1.11e-17!73;UBERON:0005743!1.11e-17!73;UBERON:0002346!8.27e-15!71;UBERON:0003075!8.27e-15!71;UBERON:0007284!8.27e-15!71;UBERON:0007811!5.95e-14!86;UBERON:0000153!2.38e-13!94;UBERON:0000033!2.20e-12!63;UBERON:0001049!4.65e-12!52;UBERON:0005068!4.65e-12!52;UBERON:0006241!4.65e-12!52;UBERON:0007135!4.65e-12!52;UBERON:0000955!1.84e-11!50;UBERON:0006238!1.84e-11!50;UBERON:0002616!5.47e-11!49;UBERON:0003056!6.68e-09!49;UBERON:0002020!1.23e-08!34;UBERON:0000475!1.78e-08!200;UBERON:0003080!2.40e-08!40;UBERON:0000477!4.74e-08!154;UBERON:0002780!8.34e-08!39;UBERON:0001890!8.34e-08!39;UBERON:0006240!8.34e-08!39;UBERON:0004111!2.37e-07!122;UBERON:0000010!5.56e-07!11;UBERON:0000025!6.62e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-18,75;UBERON:0004121,9.81e-18,95;UBERON:0000924,9.81e-18,95;UBERON:0006601,9.81e-18,95;UBERON:0001017,1.11e-17,73;UBERON:0002346,4.17e-14,64;UBERON:0003075,4.17e-14,64;UBERON:0007284,4.17e-14,64;UBERON:0010371,1.36e-13,73;UBERON:0000073,4.54e-13,54;UBERON:0010314,3.20e-12,92;UBERON:0001049,4.65e-12,52;UBERON:0005068,4.65e-12,52;UBERON:0006241,4.65e-12,52;UBERON:0007135,4.65e-12,52;UBERON:0000955,6.55e-10,47;UBERON:0006238,6.55e-10,47;UBERON:0002616,1.86e-09,46;UBERON:0003056,6.68e-09,49;UBERON:0002020,1.23e-08,34;UBERON:0003080,2.40e-08,40;UBERON:0002780,8.34e-08,39;UBERON:0001890,8.34e-08,39;UBERON:0006240,8.34e-08,39;UBERON:0004111,2.37e-07,122;UBERON:0000010,5.56e-07,11;UBERON:0000025,6.62e-07,114|phase1_expression=26.424559772291,4.53668029931169,2.27499619694768,0.30246421130683,1.50268718983904,4.53274034162102,4.67225281191051,24.2751848070163,4.646027831005,5.14941957908386,14.2110913627169,14.3589886191606,15.2368649638773,19.6695905442744,2.99798785634096,7.49158489342356,2.79824751251259,17.8236123427404,18.921791837592,10.1853516431527,14.2022294552287,17.4752074113558,16.4555867157529,6.71968175732308,8.94696196161963,4.59385571292016,5.59990595006797,4.74036711908956,3.6104449696711,2.01624103807945,7.98229838359097,6.35030673459631,6.76571266343027,15.8481681015439,0,0.664938581433969,0.408338712524738,11.7188856606334,13.2827008569046,5.75876118371178,8.82347232046521,8.19654581950135,8.73918635456076,36.3841803949418,33.4543873024398,37.2599906888214,10.1710874765245,8.28495594245697,5.4921545683618,8.36048566019419,8.25919887589639,11.5002051491977,13.0870432725034,10.1550699881588,8.06625117941913,24.9541652954869,27.7937436740594,18.5641953219879,17.1968991730658,13.7537654610729,15.8457850876545,9.82649143000483,9.78224275722253,4.04954872776629,9.88866362566974,2.1314403448383,10.1864037576258,13.831858991576,18.8715094401429,12.5555522648472,17.6672967535161,19.9955689082663,20.9825113904033,17.7611658861683,13.8975932976443,11.9498442259303,28.6301290598411,37.7954520732156,41.012944379417,14.1118327871307,17.7486028588675,15.6274011167028,36.5729728691809,33.2029939918691,32.3932285286837,41.5426305517871,34.4539467533829,24.791126294765,24.4595604466185,35.4430616900824,6.08715426273523,14.6272059086836,4.0798280022465,7.01614149129162,24.0417274455638,16.1289679355041,14.1848864333069,26.416699999599,12.2099422163348,22.6137327686618,19.4363919291819,17.9657068380045,20.3844191765317,14.2213340630666,8.87613268145978,8.86759529162845,8.59391556525132,11.418387971906,67.3238497482646,31.9150598989373,13.0113995074602,14.9188084372949,14.0675453326196,17.0316583824463,15.6392980490487,22.8713196220009,8.89901883843746,30.9442623808611,6.19227386364912,12.4560474459505,12.1462835153216,15.5160081003271,3.72783522436244,36.8903804234549,36.8626203991681,4.34276993854605,4.19352935770721,2.99951365496704,6.4805815807263,54.074420825141,33.3975440057597,25.5078334789115,42.5869584471077,37.5901722275586,46.1289458922223,39.9113507146684,16.2942982160506,13.31154585528,12.8888606801174,9.46988351489133,20.0385482162564,15.6333431014762,19.086585759367,16.2761203262572,14.5598108183842,16.9110110776002,17.8970293909082,18.1092359517311,4.31135985865684,13.0483195315795,16.5394056714112,12.2749610159442,14.7365042089567,12.8853301613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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234463 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3TPR7 | |||
|association_with_transcript=9bp_to_ENSMUST00000034030,NM_145599,uc009mhr.2_5end | |||
|cluster_id=chr8:80134496..80134542,- | |||
|description=CAGE_peak_1_at_Tmem184c_5end | |||
|id=chr8:80134496..80134542,- | |||
|ontology_enrichment_celltype=CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000540!2.53e-10!33;CL:0000047!2.53e-10!33;CL:0000031!2.53e-10!33;CL:0000404!2.53e-10!33;CL:0000055!1.52e-09!50;CL:0000221!1.90e-07!44;CL:0000133!1.90e-07!44;CL:0002319!3.21e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.67e-13,39;CL:0000211,4.67e-13,39;CL:0000540,2.53e-10,33;CL:0000047,2.53e-10,33;CL:0000031,2.53e-10,33;CL:0000404,2.53e-10,33;CL:0000221,1.90e-07,44;CL:0000133,1.90e-07,44;CL:0002319,3.21e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-18!75;UBERON:0001016!1.05e-18!75;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0001017!1.11e-17!73;UBERON:0005743!1.11e-17!73;UBERON:0002346!8.27e-15!71;UBERON:0003075!8.27e-15!71;UBERON:0007284!8.27e-15!71;UBERON:0007811!5.95e-14!86;UBERON:0000153!2.38e-13!94;UBERON:0000033!2.20e-12!63;UBERON:0001049!4.65e-12!52;UBERON:0005068!4.65e-12!52;UBERON:0006241!4.65e-12!52;UBERON:0007135!4.65e-12!52;UBERON:0000955!1.84e-11!50;UBERON:0006238!1.84e-11!50;UBERON:0002616!5.47e-11!49;UBERON:0003056!6.68e-09!49;UBERON:0002020!1.23e-08!34;UBERON:0000475!1.78e-08!200;UBERON:0003080!2.40e-08!40;UBERON:0000477!4.74e-08!154;UBERON:0002780!8.34e-08!39;UBERON:0001890!8.34e-08!39;UBERON:0006240!8.34e-08!39;UBERON:0004111!2.37e-07!122;UBERON:0000010!5.56e-07!11;UBERON:0000025!6.62e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-18,75;UBERON:0004121,9.81e-18,95;UBERON:0000924,9.81e-18,95;UBERON:0006601,9.81e-18,95;UBERON:0001017,1.11e-17,73;UBERON:0002346,4.17e-14,64;UBERON:0003075,4.17e-14,64;UBERON:0007284,4.17e-14,64;UBERON:0010371,1.36e-13,73;UBERON:0000073,4.54e-13,54;UBERON:0010314,3.20e-12,92;UBERON:0001049,4.65e-12,52;UBERON:0005068,4.65e-12,52;UBERON:0006241,4.65e-12,52;UBERON:0007135,4.65e-12,52;UBERON:0000955,6.55e-10,47;UBERON:0006238,6.55e-10,47;UBERON:0002616,1.86e-09,46;UBERON:0003056,6.68e-09,49;UBERON:0002020,1.23e-08,34;UBERON:0003080,2.40e-08,40;UBERON:0002780,8.34e-08,39;UBERON:0001890,8.34e-08,39;UBERON:0006240,8.34e-08,39;UBERON:0004111,2.37e-07,122;UBERON:0000010,5.56e-07,11;UBERON:0000025,6.62e-07,114 | |||
|phase1_expression=26.424559772291,4.53668029931169,2.27499619694768,0.30246421130683,1.50268718983904,4.53274034162102,4.67225281191051,24.2751848070163,4.646027831005,5.14941957908386,14.2110913627169,14.3589886191606,15.2368649638773,19.6695905442744,2.99798785634096,7.49158489342356,2.79824751251259,17.8236123427404,18.921791837592,10.1853516431527,14.2022294552287,17.4752074113558,16.4555867157529,6.71968175732308,8.94696196161963,4.59385571292016,5.59990595006797,4.74036711908956,3.6104449696711,2.01624103807945,7.98229838359097,6.35030673459631,6.76571266343027,15.8481681015439,0,0.664938581433969,0.408338712524738,11.7188856606334,13.2827008569046,5.75876118371178,8.82347232046521,8.19654581950135,8.73918635456076,36.3841803949418,33.4543873024398,37.2599906888214,10.1710874765245,8.28495594245697,5.4921545683618,8.36048566019419,8.25919887589639,11.5002051491977,13.0870432725034,10.1550699881588,8.06625117941913,24.9541652954869,27.7937436740594,18.5641953219879,17.1968991730658,13.7537654610729,15.8457850876545,9.82649143000483,9.78224275722253,4.04954872776629,9.88866362566974,2.1314403448383,10.1864037576258,13.831858991576,18.8715094401429,12.5555522648472,17.6672967535161,19.9955689082663,20.9825113904033,17.7611658861683,13.8975932976443,11.9498442259303,28.6301290598411,37.7954520732156,41.012944379417,14.1118327871307,17.7486028588675,15.6274011167028,36.5729728691809,33.2029939918691,32.3932285286837,41.5426305517871,34.4539467533829,24.791126294765,24.4595604466185,35.4430616900824,6.08715426273523,14.6272059086836,4.0798280022465,7.01614149129162,24.0417274455638,16.1289679355041,14.1848864333069,26.416699999599,12.2099422163348,22.6137327686618,19.4363919291819,17.9657068380045,20.3844191765317,14.2213340630666,8.87613268145978,8.86759529162845,8.59391556525132,11.418387971906,67.3238497482646,31.9150598989373,13.0113995074602,14.9188084372949,14.0675453326196,17.0316583824463,15.6392980490487,22.8713196220009,8.89901883843746,30.9442623808611,6.19227386364912,12.4560474459505,12.1462835153216,15.5160081003271,3.72783522436244,36.8903804234549,36.8626203991681,4.34276993854605,4.19352935770721,2.99951365496704,6.4805815807263,54.074420825141,33.3975440057597,25.5078334789115,42.5869584471077,37.5901722275586,46.1289458922223,39.9113507146684,16.2942982160506,13.31154585528,12.8888606801174,9.46988351489133,20.0385482162564,15.6333431014762,19.086585759367,16.2761203262572,14.5598108183842,16.9110110776002,17.8970293909082,18.1092359517311,4.31135985865684,13.0483195315795,16.5394056714112,12.2749610159442,14.7365042089567,12.8853301613202,13.1700567301084,14.131432944113,3.51106593656617,6.17634977075316,5.11494298912067,12.2204205795946,14.7751417788091,9.54328925743379,11.3637473080901,9.44468312387538,8.79322543458056,6.97601834251224,9.12129564758705,9.34122738937356,11.3546296440302,14.4467368389604,16.7001747664463,12.2807989437279,11.4166059951346,12.3469905259542,37.6419007929788,26.4464853814761,1.65209391491899,2.90895623329899,15.3567540385368,14.1664369834868,12.2424088255989,11.4959609035305,10.4517680607089,12.3646656973163,1.89811624617805,7.08205505313247,6.53471542880701,7.16243299348143,6.04388670069272,4.49409704327111,5.18731319699266,4.97853183135918,5.87970492954553,15.0808036644842,18.0332377076929,11.4044743593376,15.3222464862424,12.1334968410251,16.3150265780584,19.3369293853279,17.583857518234,18.7563689161137,21.0481365231876,5.17219827719892,6.87956482896211,4.72210436008193,3.04290182082754,5.30589751455317,4.07401362850272,8.63088412352432,7.29608520487659,8.51140380883053,15.814502718009,8.93138274404408,16.5379966750717,22.9846778931872,20.2719077279761,28.4641677604387,14.965008403495,16.4857528240322,14.1779529504563,12.2216461758135,10.0916806764056,10.5528942188344,10.7119638398706,10.1469496886055,15.7635144106191,19.710357378741,18.4967531642685,12.4536119183961,17.7865531321872,16.6346417368738,12.0633027151418,9.24639662491806,12.2941068254759,17.9358885098076,54.4266500058615,49.5805434285019,26.2295912602681,16.915552122693,24.2941328950518,37.0916807081807,34.4677436372478,34.65047570312,29.6322236529584,24.0615051170508,40.0762594658145,33.9016795177122,32.8088855695615,30.8468463764935,30.0912980641529,13.7110514823787,14.1711654637611,28.5398312742486,9.2921596837974,8.25454162926937,3.62788268357701,8.48722858901541,4.72483028609236,10.4527950300935,8.5281336745513,10.9060118843252,6.41695281092498,6.32073515871632,10.5418608574999,8.25084345985495,29.6182457005796,16.7456817449118,9.83125996748934,20.7906923980645,26.0690143454142,12.664186049747,17.9358432456312,7.61162372786498,20.4164386015428,13.7690846061483,13.8932890774626,13.3557864882599,11.1410454420175,15.078231232039,10.504766272276,12.8029901801148,5.24665505933731,64.1571544956363,11.9609616558497,8.46186158649212,9.25972636848558,9.98352822124862,8.61173634642459,9.15112692826091,2.71965487990169,3.77868921273877,3.86959926652387,4.77335309007557,20.4036715859832,12.4024874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| |||
|short_description=p1@Tmem184c | |||
}} |
Latest revision as of 19:29, 25 September 2015
Short description: | p1@Tmem184c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem184c_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000034030, NM_145599, uc009mhr.2_5end |
EntrezGene: | Tmem184c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.67e-13 | 39 |
electrically active cell | 4.67e-13 | 39 |
neuron | 2.53e-10 | 33 |
neuronal stem cell | 2.53e-10 | 33 |
neuroblast | 2.53e-10 | 33 |
electrically signaling cell | 2.53e-10 | 33 |
ectodermal cell | 1.90e-07 | 44 |
neurectodermal cell | 1.90e-07 | 44 |
neural cell | 3.21e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.05e-18 | 75 |
ectoderm-derived structure | 9.81e-18 | 95 |
ectoderm | 9.81e-18 | 95 |
presumptive ectoderm | 9.81e-18 | 95 |
central nervous system | 1.11e-17 | 73 |
neurectoderm | 4.17e-14 | 64 |
neural plate | 4.17e-14 | 64 |
presumptive neural plate | 4.17e-14 | 64 |
ecto-epithelium | 1.36e-13 | 73 |
regional part of nervous system | 4.54e-13 | 54 |
structure with developmental contribution from neural crest | 3.20e-12 | 92 |
neural tube | 4.65e-12 | 52 |
neural rod | 4.65e-12 | 52 |
future spinal cord | 4.65e-12 | 52 |
neural keel | 4.65e-12 | 52 |
brain | 6.55e-10 | 47 |
future brain | 6.55e-10 | 47 |
regional part of brain | 1.86e-09 | 46 |
pre-chordal neural plate | 6.68e-09 | 49 |
gray matter | 1.23e-08 | 34 |
anterior neural tube | 2.40e-08 | 40 |
regional part of forebrain | 8.34e-08 | 39 |
forebrain | 8.34e-08 | 39 |
future forebrain | 8.34e-08 | 39 |
anatomical conduit | 2.37e-07 | 122 |
peripheral nervous system | 5.56e-07 | 11 |
tube | 6.62e-07 | 114 |