FFCP PHASE1:Mm9::chr8:70342183..70342219,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=234353|HGNC=|MCL_coexpression_id=2|UniProt=E9PUC5,Q2PFD7,Q78V97,Q8C0E9|association_with_transcript=0bp_to_ENSMUST00000120071,NM_027626,uc009lwb.2,uc012gel.1_5end|description=CAGE_peak_3_at_Psd3_5end|id=chr8:70342183..70342219,-|ontology_enrichment_celltype=CL:0000117!8.44e-10!23;CL:0000337!8.44e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-12,23;CL:0000337,3.39e-12,23;CL:0000393,8.49e-08,39;CL:0000211,8.49e-08,39;CL:0000540,1.84e-07,33;CL:0000047,1.84e-07,33;CL:0000031,1.84e-07,33;CL:0000404,1.84e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.99e-19!52;UBERON:0005068!1.99e-19!52;UBERON:0006241!1.99e-19!52;UBERON:0007135!1.99e-19!52;UBERON:0000033!2.50e-19!63;UBERON:0000955!2.50e-18!50;UBERON:0006238!2.50e-18!50;UBERON:0002346!1.04e-17!71;UBERON:0003075!1.04e-17!71;UBERON:0007284!1.04e-17!71;UBERON:0002616!1.19e-17!49;UBERON:0001017!1.30e-17!73;UBERON:0005743!1.30e-17!73;UBERON:0000073!9.41e-17!75;UBERON:0001016!9.41e-17!75;UBERON:0002020!2.48e-16!34;UBERON:0003056!1.92e-15!49;UBERON:0003080!2.35e-14!40;UBERON:0002780!9.26e-14!39;UBERON:0001890!9.26e-14!39;UBERON:0006240!9.26e-14!39;UBERON:0002791!2.18e-13!29;UBERON:0003528!2.18e-13!29;UBERON:0001893!2.18e-13!29;UBERON:0004121!4.52e-13!102;UBERON:0000924!4.52e-13!102;UBERON:0006601!4.52e-13!102;UBERON:0000153!7.65e-12!94;UBERON:0007811!7.80e-12!86;UBERON:0000956!5.58e-09!21;UBERON:0001869!5.58e-09!21;UBERON:0000203!5.58e-09!21;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0002619!1.56e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.22e-26,54;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0001017,2.16e-23,73;UBERON:0001016,2.61e-22,75;UBERON:0002020,1.50e-20,34;UBERON:0000955,7.57e-20,47;UBERON:0006238,7.57e-20,47;UBERON:0002346,7.96e-20,64;UBERON:0003075,7.96e-20,64;UBERON:0007284,7.96e-20,64;UBERON:0002616,6.64e-19,46;UBERON:0003080,1.08e-16,40;UBERON:0010371,1.94e-16,73;UBERON:0004121,2.04e-16,95;UBERON:0000924,2.04e-16,95;UBERON:0006601,2.04e-16,95;UBERON:0003528,3.26e-16,29;UBERON:0002791,3.26e-16,29;UBERON:0001893,3.26e-16,29;UBERON:0002780,7.56e-16,39;UBERON:0001890,7.56e-16,39;UBERON:0006240,7.56e-16,39;UBERON:0003056,1.83e-14,49;UBERON:0002021,3.02e-12,10;UBERON:0000411,3.02e-12,10;UBERON:0001950,3.02e-12,10;UBERON:0002619,2.45e-11,17;UBERON:0010314,3.83e-10,92;UBERON:0000956,7.97e-10,21;UBERON:0001869,7.97e-10,21;UBERON:0000203,7.97e-10,21;UBERON:0003076,4.11e-08,12;UBERON:0003057,4.11e-08,12;UBERON:0002420,4.61e-08,8;UBERON:0007245,4.61e-08,8;UBERON:0010009,4.61e-08,8;UBERON:0010011,4.61e-08,8;UBERON:0000454,4.61e-08,8|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,3.85232338634155,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,1.81982348112971,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,3.1691570175309,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,10.8547374073445,10.6016899656774,2.20483438586917,1.15014565221884,0,7.70811166995721,37.9231394113008,28.5708151856613,3.82470234417562,3.47653045689157,4.16730696445408,10.8881369610539,19.6966913511088,32.3932285286837,22.6864010814724,31.1793980950035,8.20157561631323,0,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,53.5788858531131,89.2242971025319,0.255457055208591,0,0,0,21.12048015608,43.9200578705881,8.54449594367478,89.1718762586378,92.3132800962493,42.3887610901503,41.0470395561427,0.712875546952214,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.720248519221397,0.60281927134286,1.36072998302656,1.5373646434182,0.655912071918102,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.116765342367169,0.658239399653922,0,0.0810688095458557,0,0,0,103.672944642115,14.4066457330998,0,0.528901133327089,0.853153002140936,1.16118335930219,0.257734922644187,0.605050573870028,0.444756087689741,0.380451252225118,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0,0,16.8578119487182,14.7686725106176,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0,0,0,0,0,63.300299335096,0.425820255624806,0.534196811001766,1.30309567482861,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.214337035031592,1.24138163549592,1.96205699362278,2.79733335023606,0.608929898229199,0.23467170806371,0,0.441056796109924,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.582961673259701,17.0591277849669,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.216010681643603,1.25452977608681,0,0.809186078308924,0.909188012978695,0,0.129614973291793,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,84.71277639256,109.097081052201,94.5277597175004,73.8968684077857,88.3756450504129,81.5825409180877,79.6526550273531,97.7197010996558,96.0661907046514,83.359410192043,0,1.59609949360412,0.853668028770671,0.972426868273176,2.30574478890781,1.83843508450014,2.22246727801615,1.03017528619447,2.88827288632634,2.02157769411038,1.01391719956096,3.58390048633545,1.96647165686753,1.72867911493147,2.01024141344646,3.81034953026459,1.97003354106254,3.47236596834669,1.64834360321323,1.61918812147837,1.02860775715625,2.12970967391205,3.09967046931517,2.0348498328526,2.54095327121393,1.52306294205018,2.0122077016005,2.63069711437843,1.90125759384206,1.12228454331548,2.60997039873183,2.46261205938909,3.27384834535751,1.39443157067369,0.771626443924566,2.24829520144151,1.87145286756327,2.79332370262788,2.48674831689496,0.661774257358546,0.231867835620421|short_description=p3@Psd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234353 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=E9PUC5,Q2PFD7,Q78V97,Q8C0E9 | |||
|association_with_transcript=0bp_to_ENSMUST00000120071,NM_027626,uc009lwb.2,uc012gel.1_5end | |||
|cluster_id=chr8:70342183..70342219,- | |||
|description=CAGE_peak_3_at_Psd3_5end | |||
|id=chr8:70342183..70342219,- | |||
|ontology_enrichment_celltype=CL:0000117!8.44e-10!23;CL:0000337!8.44e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-12,23;CL:0000337,3.39e-12,23;CL:0000393,8.49e-08,39;CL:0000211,8.49e-08,39;CL:0000540,1.84e-07,33;CL:0000047,1.84e-07,33;CL:0000031,1.84e-07,33;CL:0000404,1.84e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.99e-19!52;UBERON:0005068!1.99e-19!52;UBERON:0006241!1.99e-19!52;UBERON:0007135!1.99e-19!52;UBERON:0000033!2.50e-19!63;UBERON:0000955!2.50e-18!50;UBERON:0006238!2.50e-18!50;UBERON:0002346!1.04e-17!71;UBERON:0003075!1.04e-17!71;UBERON:0007284!1.04e-17!71;UBERON:0002616!1.19e-17!49;UBERON:0001017!1.30e-17!73;UBERON:0005743!1.30e-17!73;UBERON:0000073!9.41e-17!75;UBERON:0001016!9.41e-17!75;UBERON:0002020!2.48e-16!34;UBERON:0003056!1.92e-15!49;UBERON:0003080!2.35e-14!40;UBERON:0002780!9.26e-14!39;UBERON:0001890!9.26e-14!39;UBERON:0006240!9.26e-14!39;UBERON:0002791!2.18e-13!29;UBERON:0003528!2.18e-13!29;UBERON:0001893!2.18e-13!29;UBERON:0004121!4.52e-13!102;UBERON:0000924!4.52e-13!102;UBERON:0006601!4.52e-13!102;UBERON:0000153!7.65e-12!94;UBERON:0007811!7.80e-12!86;UBERON:0000956!5.58e-09!21;UBERON:0001869!5.58e-09!21;UBERON:0000203!5.58e-09!21;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0002619!1.56e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.22e-26,54;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0001017,2.16e-23,73;UBERON:0001016,2.61e-22,75;UBERON:0002020,1.50e-20,34;UBERON:0000955,7.57e-20,47;UBERON:0006238,7.57e-20,47;UBERON:0002346,7.96e-20,64;UBERON:0003075,7.96e-20,64;UBERON:0007284,7.96e-20,64;UBERON:0002616,6.64e-19,46;UBERON:0003080,1.08e-16,40;UBERON:0010371,1.94e-16,73;UBERON:0004121,2.04e-16,95;UBERON:0000924,2.04e-16,95;UBERON:0006601,2.04e-16,95;UBERON:0003528,3.26e-16,29;UBERON:0002791,3.26e-16,29;UBERON:0001893,3.26e-16,29;UBERON:0002780,7.56e-16,39;UBERON:0001890,7.56e-16,39;UBERON:0006240,7.56e-16,39;UBERON:0003056,1.83e-14,49;UBERON:0002021,3.02e-12,10;UBERON:0000411,3.02e-12,10;UBERON:0001950,3.02e-12,10;UBERON:0002619,2.45e-11,17;UBERON:0010314,3.83e-10,92;UBERON:0000956,7.97e-10,21;UBERON:0001869,7.97e-10,21;UBERON:0000203,7.97e-10,21;UBERON:0003076,4.11e-08,12;UBERON:0003057,4.11e-08,12;UBERON:0002420,4.61e-08,8;UBERON:0007245,4.61e-08,8;UBERON:0010009,4.61e-08,8;UBERON:0010011,4.61e-08,8;UBERON:0000454,4.61e-08,8 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,3.85232338634155,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,1.81982348112971,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,3.1691570175309,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,10.8547374073445,10.6016899656774,2.20483438586917,1.15014565221884,0,7.70811166995721,37.9231394113008,28.5708151856613,3.82470234417562,3.47653045689157,4.16730696445408,10.8881369610539,19.6966913511088,32.3932285286837,22.6864010814724,31.1793980950035,8.20157561631323,0,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,53.5788858531131,89.2242971025319,0.255457055208591,0,0,0,21.12048015608,43.9200578705881,8.54449594367478,89.1718762586378,92.3132800962493,42.3887610901503,41.0470395561427,0.712875546952214,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.720248519221397,0.60281927134286,1.36072998302656,1.5373646434182,0.655912071918102,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.116765342367169,0.658239399653922,0,0.0810688095458557,0,0,0,103.672944642115,14.4066457330998,0,0.528901133327089,0.853153002140936,1.16118335930219,0.257734922644187,0.605050573870028,0.444756087689741,0.380451252225118,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0,0,16.8578119487182,14.7686725106176,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0,0,0,0,0,63.300299335096,0.425820255624806,0.534196811001766,1.30309567482861,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.214337035031592,1.24138163549592,1.96205699362278,2.79733335023606,0.608929898229199,0.23467170806371,0,0.441056796109924,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.582961673259701,17.0591277849669,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.216010681643603,1.25452977608681,0,0.809186078308924,0.909188012978695,0,0.129614973291793,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,84.71277639256,109.097081052201,94.5277597175004,73.8968684077857,88.3756450504129,81.5825409180877,79.6526550273531,97.7197010996558,96.0661907046514,83.359410192043,0,1.59609949360412,0.853668028770671,0.972426868273176,2.30574478890781,1.83843508450014,2.22246727801615,1.03017528619447,2.88827288632634,2.02157769411038,1.01391719956096,3.58390048633545,1.96647165686753,1.72867911493147,2.01024141344646,3.81034953026459,1.97003354106254,3.47236596834669,1.64834360321323,1.61918812147837,1.02860775715625,2.12970967391205,3.09967046931517,2.0348498328526,2.54095327121393,1.52306294205018,2.0122077016005,2.63069711437843,1.90125759384206,1.12228454331548,2.60997039873183,2.46261205938909,3.27384834535751,1.39443157067369,0.771626443924566,2.24829520144151,1.87145286756327,2.79332370262788,2.48674831689496,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Psd3 | |||
}} |
Latest revision as of 16:31, 25 September 2015
Short description: | p3@Psd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Psd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000120071, NM_027626, uc009lwb.2, uc012gel.1_5end |
EntrezGene: | Psd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.39e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.39e-12 | 23 |
electrically responsive cell | 8.49e-08 | 39 |
electrically active cell | 8.49e-08 | 39 |
neuron | 1.84e-07 | 33 |
neuronal stem cell | 1.84e-07 | 33 |
neuroblast | 1.84e-07 | 33 |
electrically signaling cell | 1.84e-07 | 33 |