FFCP PHASE1:Mm9::chr8:67171842..67171871,-: Difference between revisions
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{{FFCP|EntrezGene=12876|HGNC=|MCL_coexpression_id=1|UniProt=Q00493,Q543R4|association_with_transcript=-5bp_to_ENSMUST00000048967,NM_013494,uc009luw.1_5end|description=CAGE_peak_1_at_Cpe_5end|id=chr8:67171842..67171871,-|ontology_enrichment_celltype=CL:0000055!6.44e-18!50;CL:0000221!2.80e-16!44;CL:0000133!2.80e-16!44;CL:0002319!3.86e-16!43;CL:0000393!3.62e-14!39;CL:0000211!3.62e-14!39;CL:0000540!1.05e-11!33;CL:0000047!1.05e-11!33;CL:0000031!1.05e-11!33;CL:0000404!1.05e-11!33;CL:0000117!1.99e-11!23;CL:0000337!1.99e-11!23;CL:0002321!2.28e-08!70;CL:0000220!2.28e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,2.49e-16,44;CL:0000133,2.49e-16,44;CL:0002319,3.44e-16,43;CL:0000393,3.28e-14,39;CL:0000211,3.28e-14,39;CL:0000540,9.71e-12,33;CL:0000047,9.71e-12,33;CL:0000031,9.71e-12,33;CL:0000404,9.71e-12,33;CL:0000117,1.84e-11,23;CL:0000337,1.84e-11,23;CL:0002321,2.06e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.08e-32!75;UBERON:0001016!2.08e-32!75;UBERON:0001017!2.13e-31!73;UBERON:0005743!2.13e-31!73;UBERON:0004121!9.66e-31!102;UBERON:0000924!9.66e-31!102;UBERON:0006601!9.66e-31!102;UBERON:0002346!5.94e-25!71;UBERON:0003075!5.94e-25!71;UBERON:0007284!5.94e-25!71;UBERON:0001049!5.54e-24!52;UBERON:0005068!5.54e-24!52;UBERON:0006241!5.54e-24!52;UBERON:0007135!5.54e-24!52;UBERON:0000033!1.27e-23!63;UBERON:0000955!4.21e-23!50;UBERON:0006238!4.21e-23!50;UBERON:0002616!1.77e-22!49;UBERON:0002020!1.33e-18!34;UBERON:0003056!5.63e-18!49;UBERON:0003080!1.92e-17!40;UBERON:0002780!7.28e-17!39;UBERON:0001890!7.28e-17!39;UBERON:0006240!7.28e-17!39;UBERON:0002791!1.02e-15!29;UBERON:0003528!1.02e-15!29;UBERON:0001893!1.02e-15!29;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0002619!1.38e-10!17;UBERON:0007811!2.99e-10!86;UBERON:0000153!1.15e-09!94;UBERON:0002021!4.71e-08!10;UBERON:0000411!4.71e-08!10;UBERON:0001950!4.71e-08!10;UBERON:0004111!9.05e-08!122;UBERON:0000025!1.13e-07!114;UBERON:0003076!3.60e-07!12;UBERON:0003057!3.60e-07!12;UBERON:0000468!9.89e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.63e-32,75;UBERON:0001017,1.68e-31,73;UBERON:0004121,1.89e-29,95;UBERON:0000924,1.89e-29,95;UBERON:0006601,1.89e-29,95;UBERON:0010314,1.69e-26,92;UBERON:0000073,1.16e-25,54;UBERON:0002346,4.32e-24,64;UBERON:0003075,4.32e-24,64;UBERON:0007284,4.32e-24,64;UBERON:0001049,4.65e-24,52;UBERON:0005068,4.65e-24,52;UBERON:0006241,4.65e-24,52;UBERON:0007135,4.65e-24,52;UBERON:0010371,2.35e-21,73;UBERON:0000955,4.87e-21,47;UBERON:0006238,4.87e-21,47;UBERON:0002616,2.00e-20,46;UBERON:0002020,1.16e-18,34;UBERON:0003056,4.95e-18,49;UBERON:0003080,1.70e-17,40;UBERON:0002780,6.45e-17,39;UBERON:0001890,6.45e-17,39;UBERON:0006240,6.45e-17,39;UBERON:0003528,9.13e-16,29;UBERON:0002791,9.13e-16,29;UBERON:0001893,9.13e-16,29;UBERON:0000956,2.77e-11,21;UBERON:0001869,2.77e-11,21;UBERON:0000203,2.77e-11,21;UBERON:0002619,1.28e-10,17;UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004111,1.89e-07,122;UBERON:0000025,2.39e-07,114;UBERON:0003076,3.45e-07,12;UBERON:0003057,3.45e-07,12|phase1_expression=82.9571028002833,1.04692622291808,0,0.30246421130683,0,12.0873075776561,7.94282978024787,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,76.3688745556607,0.893618560807968,0.261199789138935,2.87986361028132,2.98232065387321,1.14846392823004,2.15380998079537,2.37018355954478,2.28028103347649,1.76421090831952,3.32595765982957,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,92.911851665976,90.1240918541484,162.071782158765,71.9800036800196,92.8787166180702,160.810285761633,176.736778258524,208.999727486666,127.939782284825,0,0,0,114.480449035996,95.7021689395447,161.405364882839,143.240054288595,160.284266719426,137.541414560841,81.3226876965917,68.4756993005577,11.2487464660175,12.8552627133707,8.5257613793532,165.079660895641,246.668152016438,43.5496371695606,45.7670130944431,43.3269420383847,357.920683457966,334.174102459791,78.5166022967855,76.6763768145891,53.3146896233812,466.891335437408,427.241833233038,468.039106831774,174.485558667046,230.09142366006,188.570640141547,346.466101760714,400.124215732524,483.453655965827,335.287330269034,305.529626994875,165.336308447042,77.9222529398464,162.327711109375,24.0587525622393,2.58127163094416,0.679971333707751,1.07940638327563,0,0,24.2968846827931,59.6506129023202,46.5016948239135,51.5875778785097,45.4924245878678,55.1803852881567,20.3844191765317,85.3280043783997,11.4740251735943,12.6679932737549,5.05524445014783,13.9304333257253,11.6522047641227,163.731679388502,19.7773272513395,28.010824004717,31.59432312408,55.7673770044703,62.0868373676521,103.674937846982,18.0452326446093,52.7787652757678,20.3460426948471,50.3094903336443,49.4685001351282,47.0328995541165,11.1835056730873,166.59227349957,195.20433075014,8.68553987709211,0,0,0,296.136094103334,281.362870733455,174.031277676317,348.517761985514,421.419073680385,386.901338969901,385.485241048992,4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12876 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q00493,Q543R4 | |||
|association_with_transcript=-5bp_to_ENSMUST00000048967,NM_013494,uc009luw.1_5end | |||
|cluster_id=chr8:67171842..67171871,- | |||
|description=CAGE_peak_1_at_Cpe_5end | |||
|id=chr8:67171842..67171871,- | |||
|ontology_enrichment_celltype=CL:0000055!6.44e-18!50;CL:0000221!2.80e-16!44;CL:0000133!2.80e-16!44;CL:0002319!3.86e-16!43;CL:0000393!3.62e-14!39;CL:0000211!3.62e-14!39;CL:0000540!1.05e-11!33;CL:0000047!1.05e-11!33;CL:0000031!1.05e-11!33;CL:0000404!1.05e-11!33;CL:0000117!1.99e-11!23;CL:0000337!1.99e-11!23;CL:0002321!2.28e-08!70;CL:0000220!2.28e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.49e-16,44;CL:0000133,2.49e-16,44;CL:0002319,3.44e-16,43;CL:0000393,3.28e-14,39;CL:0000211,3.28e-14,39;CL:0000540,9.71e-12,33;CL:0000047,9.71e-12,33;CL:0000031,9.71e-12,33;CL:0000404,9.71e-12,33;CL:0000117,1.84e-11,23;CL:0000337,1.84e-11,23;CL:0002321,2.06e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.08e-32!75;UBERON:0001016!2.08e-32!75;UBERON:0001017!2.13e-31!73;UBERON:0005743!2.13e-31!73;UBERON:0004121!9.66e-31!102;UBERON:0000924!9.66e-31!102;UBERON:0006601!9.66e-31!102;UBERON:0002346!5.94e-25!71;UBERON:0003075!5.94e-25!71;UBERON:0007284!5.94e-25!71;UBERON:0001049!5.54e-24!52;UBERON:0005068!5.54e-24!52;UBERON:0006241!5.54e-24!52;UBERON:0007135!5.54e-24!52;UBERON:0000033!1.27e-23!63;UBERON:0000955!4.21e-23!50;UBERON:0006238!4.21e-23!50;UBERON:0002616!1.77e-22!49;UBERON:0002020!1.33e-18!34;UBERON:0003056!5.63e-18!49;UBERON:0003080!1.92e-17!40;UBERON:0002780!7.28e-17!39;UBERON:0001890!7.28e-17!39;UBERON:0006240!7.28e-17!39;UBERON:0002791!1.02e-15!29;UBERON:0003528!1.02e-15!29;UBERON:0001893!1.02e-15!29;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0002619!1.38e-10!17;UBERON:0007811!2.99e-10!86;UBERON:0000153!1.15e-09!94;UBERON:0002021!4.71e-08!10;UBERON:0000411!4.71e-08!10;UBERON:0001950!4.71e-08!10;UBERON:0004111!9.05e-08!122;UBERON:0000025!1.13e-07!114;UBERON:0003076!3.60e-07!12;UBERON:0003057!3.60e-07!12;UBERON:0000468!9.89e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.63e-32,75;UBERON:0001017,1.68e-31,73;UBERON:0004121,1.89e-29,95;UBERON:0000924,1.89e-29,95;UBERON:0006601,1.89e-29,95;UBERON:0010314,1.69e-26,92;UBERON:0000073,1.16e-25,54;UBERON:0002346,4.32e-24,64;UBERON:0003075,4.32e-24,64;UBERON:0007284,4.32e-24,64;UBERON:0001049,4.65e-24,52;UBERON:0005068,4.65e-24,52;UBERON:0006241,4.65e-24,52;UBERON:0007135,4.65e-24,52;UBERON:0010371,2.35e-21,73;UBERON:0000955,4.87e-21,47;UBERON:0006238,4.87e-21,47;UBERON:0002616,2.00e-20,46;UBERON:0002020,1.16e-18,34;UBERON:0003056,4.95e-18,49;UBERON:0003080,1.70e-17,40;UBERON:0002780,6.45e-17,39;UBERON:0001890,6.45e-17,39;UBERON:0006240,6.45e-17,39;UBERON:0003528,9.13e-16,29;UBERON:0002791,9.13e-16,29;UBERON:0001893,9.13e-16,29;UBERON:0000956,2.77e-11,21;UBERON:0001869,2.77e-11,21;UBERON:0000203,2.77e-11,21;UBERON:0002619,1.28e-10,17;UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004111,1.89e-07,122;UBERON:0000025,2.39e-07,114;UBERON:0003076,3.45e-07,12;UBERON:0003057,3.45e-07,12 | |||
|phase1_expression=82.9571028002833,1.04692622291808,0,0.30246421130683,0,12.0873075776561,7.94282978024787,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,76.3688745556607,0.893618560807968,0.261199789138935,2.87986361028132,2.98232065387321,1.14846392823004,2.15380998079537,2.37018355954478,2.28028103347649,1.76421090831952,3.32595765982957,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,92.911851665976,90.1240918541484,162.071782158765,71.9800036800196,92.8787166180702,160.810285761633,176.736778258524,208.999727486666,127.939782284825,0,0,0,114.480449035996,95.7021689395447,161.405364882839,143.240054288595,160.284266719426,137.541414560841,81.3226876965917,68.4756993005577,11.2487464660175,12.8552627133707,8.5257613793532,165.079660895641,246.668152016438,43.5496371695606,45.7670130944431,43.3269420383847,357.920683457966,334.174102459791,78.5166022967855,76.6763768145891,53.3146896233812,466.891335437408,427.241833233038,468.039106831774,174.485558667046,230.09142366006,188.570640141547,346.466101760714,400.124215732524,483.453655965827,335.287330269034,305.529626994875,165.336308447042,77.9222529398464,162.327711109375,24.0587525622393,2.58127163094416,0.679971333707751,1.07940638327563,0,0,24.2968846827931,59.6506129023202,46.5016948239135,51.5875778785097,45.4924245878678,55.1803852881567,20.3844191765317,85.3280043783997,11.4740251735943,12.6679932737549,5.05524445014783,13.9304333257253,11.6522047641227,163.731679388502,19.7773272513395,28.010824004717,31.59432312408,55.7673770044703,62.0868373676521,103.674937846982,18.0452326446093,52.7787652757678,20.3460426948471,50.3094903336443,49.4685001351282,47.0328995541165,11.1835056730873,166.59227349957,195.20433075014,8.68553987709211,0,0,0,296.136094103334,281.362870733455,174.031277676317,348.517761985514,421.419073680385,386.901338969901,385.485241048992,45.2166775495404,44.6621024490234,14.6579199891531,63.9743241894881,14.053007839972,34.7152177694544,33.491556143795,39.0325478194502,49.6666443804693,44.8398020996974,56.9706485323151,71.6608336947073,13.7963515477019,25.7184269028234,32.7269090944945,40.5512104991013,28.0827721717854,19.5021213252413,22.2244707320579,9.75267907410617,0,0,0,14.9130556225561,17.5894544985822,25.5688127274641,32.1972840395886,31.4822770795846,36.4070386414213,26.0438018120457,34.0707219777516,36.1972561338225,30.7726919338208,37.2660143459546,46.1281526315919,52.339595498269,38.6408202912249,49.1195492662961,429.832654865076,119.780968809487,6.60837565967596,6.08236303326152,16.423195291213,16.2565670302307,23.0672755766547,21.781820659321,19.1245117706588,24.5391057685201,17.0830462156024,30.139908714494,21.6148279568232,22.2831248686089,21.8359777573415,12.5834717211591,13.6166971421057,14.5373129475688,11.0007382552787,9.36837803399776,5.63538678365402,9.57161240872977,8.53390943537553,13.0452624995993,16.8209188750524,6.6424566590821,5.96595165797224,6.41665252393363,0.889357881261447,1.83529616287703,1.76903095601883,0.449724224769707,0.405720242777006,0.241177159752417,1.78238096246994,1.72617682470486,0.810676133875177,0.549122826376163,1.43768206527355,1.11642284300551,3.12037673114561,0.757736633841335,1.25578189465339,0.482443521363367,5.17308932466493,12.127450353311,5.21487924614483,4.92260748748046,2.11221223459652,5.02518772325447,7.61739650835244,8.39074685788535,5.2019597555043,5.97954662051692,4.9430978283821,5.24362607090362,6.73471429276993,4.33947175744535,0,0.54390568381871,2.95058563811422,2.48343071674259,193.302910345302,214.145751403955,36.0656879828686,62.3603190194801,21.7700671397217,24.9880796349849,39.637905182835,33.9335693092624,54.5856751501866,56.0491530961888,37.2425845540903,51.4370309923909,47.8298211315293,312.645640878418,97.228958367664,27.2440373610901,38.441322407444,59.8841546390304,14.6019652173959,16.7518638946937,33.5579148230874,49.0373207365335,63.7852088622469,98.6866824900007,72.8767786734384,87.6116288040788,62.0305438389415,57.2026531863827,36.8965130012496,40.2228618667929,165.453648396341,17.2858650270058,20.8267480890235,30.0071849044229,38.3054904667311,54.2241205510295,60.5540395815805,84.336790904744,38.4861601224485,26.9026729997052,11.0264199027481,20.940554123568,20.8289110437718,23.4617277970526,25.1875645846618,10.669158483429,13.1166376483433,196.179969527119,0.683483523191411,10.9385040020508,7.03739204004904,1.31857919903284,1.50363650493128,2.0590035588587,0.169978429993855,0.279902904647316,0.276399947608848,25.7761066864081,13.1279437336171,18.9087104427969,16.848833168201,22.1633593775337,18.9975430459175,19.6901945721838,36.2848670634225,35.337052167844,25.9229946583586,26.0962511496509,9.01908701894705,24.6702300972565,24.1569396067363,27.0287151798226,35.0023121624651,34.8049618511003,38.8452459917446,49.8682793952329,70.9897761762062,24.1584120826006,30.5311806633337,0.632022241256357,12.5689633479902,8.42229848751584,3.89762468933385,3.75956060901711,3.17890167650024,2.16351809135944,1.47689527174577,2.22126189885925,1.06689529317,0.9074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| |||
|short_description=p1@Cpe | |||
}} |
Latest revision as of 16:11, 25 September 2015
Short description: | p1@Cpe |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cpe_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -5bp_to_ENSMUST00000048967, NM_013494, uc009luw.1_5end |
EntrezGene: | Cpe |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.49e-16 | 44 |
neurectodermal cell | 2.49e-16 | 44 |
neural cell | 3.44e-16 | 43 |
electrically responsive cell | 3.28e-14 | 39 |
electrically active cell | 3.28e-14 | 39 |
neuron | 9.71e-12 | 33 |
neuronal stem cell | 9.71e-12 | 33 |
neuroblast | 9.71e-12 | 33 |
electrically signaling cell | 9.71e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.84e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-11 | 23 |
embryonic cell | 2.06e-08 | 70 |