FFCP PHASE1:Mm9::chr8:13159208..13159215,+: Difference between revisions
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{{FFCP|EntrezGene=16783|HGNC=|MCL_coexpression_id=1266|UniProt=P11438,Q3TA96,Q3TX84,Q9DC13|association_with_transcript=73bp_to_ENSMUST00000033824,NM_010684,uc009kxa.1,uc009kxb.1_5end|description=CAGE_peak_3_at_Lamp1_5end|id=chr8:13159208..13159215,+|ontology_enrichment_celltype=CL:0000333!8.53e-07!10;CL:0000095!8.53e-07!10;CL:0000243!8.53e-07!10;CL:0000123!8.53e-07!10;CL:0000125!8.53e-07!10;CL:0000030!8.53e-07!10;CL:0000339!8.53e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,6.90e-07,10;CL:0000095,6.90e-07,10;CL:0000243,6.90e-07,10;CL:0000123,6.90e-07,10;CL:0000125,6.90e-07,10;CL:0000030,6.90e-07,10;CL:0000339,6.90e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.86e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.95e-07,51|phase1_expression=1.44133962394315,10.4692622291808,11.8299802241279,2.11724947914781,2.00358291978539,3.86122325397347,3.50418960893289,0.903863264091034,0.281577444303333,0.234064526321993,0.68487187290202,0.797721589953364,0.513602189793617,0.611942816932982,0,1.01237633694913,0.699561878128147,1.26184866143295,0.548457734422955,0.42438965179803,2.12608225377674,1.19149141441062,0.783599367416806,7.1996590257033,9.1763712426868,10.9104073181854,7.32295393470427,4.52489588640367,1.52018735565099,1.76421090831952,2.66076612786366,1.90509202037889,2.46025915033828,15.8481681015439,0.288851619751275,0.664938581433969,0.612508068787107,0,1.5626706890476,0,0.588231488031014,0,0.485510353031154,4.15459499319405,3.64956952390252,5.50640256485045,7.82391344348039,7.41285531693518,7.46933021297204,9.3326351555656,5.5994568650145,7.18762821824858,0.167782606057736,0,0.336093799142464,7.20326420900652,7.44986943840768,6.70373719960675,1.21389876515759,0.528990979272033,1.26766280701236,8.80995783379743,13.3394219416671,11.6986963246582,9.88866362566974,11.3676818391376,6.89080254192331,6.53171119046643,0.518448061542388,1.08004750665353,0.841299845405528,2.57085885963423,3.53389665522582,0.61245399607477,0.575072826109418,1.83843757322004,3.30347642998166,3.57524546638526,3.68655679814984,0.923204014111357,1.28082701043374,0.52091337055676,3.07101298901519,2.8138130501584,2.44477196442896,2.65165726926301,2.42031857358475,1.4911955666024,5.14938114665652,5.81901012822248,2.02905142091174,3.44169550792555,8.15965600449301,6.47643829965381,10.3964226791627,4.92829575807069,2.10666630197628,4.26075806445144,3.37721805983729,3.5333957451034,1.40843419776681,3.84979432242953,2.54805239706646,0,2.81438353314578,3.54703811665138,5.05524445014783,3.9964357901671,1.8125651855302,3.26572705942614,1.56136794089522,0.608930956624282,2.07553947530453,1.05505848386836,1.29347577849275,1.25666591329675,4.94389935468748,7.22996784599558,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,3.72783522436244,2.63502717310392,2.51336048176146,2.04365644166873,1.07833612055328,1.19980546198682,1.52484272487678,2.99581278809645,3.20250421973039,3.01570445070875,3.47648640384553,3.06858548796397,2.49345653471472,3.24482526135515,1.42575109390443,1.8661045591514,8.33985102831127,4.41927897361595,1.17108398666433,0.229902104433473,1.44049703844279,1.05493372485001,1.02054748726992,1.0249097622788,1.59292931751539,1.03481348295606,0.431135985865684,0.189106080167819,0.879755620819744,0.657587197282725,0.278047249225598,1.74126083261083,0.823128545631774,2.38841120182192,0,1.28673953557358,1.70498099637356,1.44988040774851,1.87620847984877,1.44049649168812,1.65721314909647,0.983821158737019,1.07986979021165,0.930135779001631,2.68273401399619,1.28441876603886,1.31647879930784,0.820837320395476,1.70244500046297,3.65499968563331,3.95190207523891,3.08674763148855,1.68231958851302,1.44066457330998,2.31293148088659,1.85115396664481,1.06644125267617,0.928946687441754,1.03093969057675,1.4117846723634,2.00140239460383,2.09248188723815,2.37264530772256,2.14108641141214,4.52403375840485,1.98956472041151,3.50935356814416,0.898819408654221,1.08069024937347,2.19055400579804,1.13800740571849,0.913988100877831,1.1270773567308,0.610953983535943,1.74557238450863,1.82353131714828,3.03535378196435,3.98547399544926,4.08196692387575,4.56569506510662,4.44678940630723,1.00107063429656,1.37591296579242,1.12431056192427,0.811440485554012,1.68824011826692,0.25462585178142,2.30156909960649,1.29708181420028,0.823684239564244,8.62609239164127,3.34926852901653,2.18426371180192,4.04126204715379,5.38192240565737,5.78932225636041,1.47802552133284,0.947457058852424,1.30371981153621,1.35796068620151,2.11221223459652,1.84256883185997,1.42826184531608,2.53673742215138,0.630540576424764,2.6575762757853,2.07291199254733,2.29408640602033,1.38147985492716,1.73578870297814,9.04747703635634,15.7732648307426,1.96705709207614,2.48343071674259,5.13761887960934,4.45404409050372,2.62295912602681,3.28212205365685,0.315508219416257,1.95219372148319,1.50796378412959,2.86762557543062,2.00518806674155,1.13230612315533,3.64329631507405,2.33804686329049,1.97643888973262,2.891891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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16783 | |||
|HGNC= | |||
|MCL_coexpression_id=1266 | |||
|TSSclassifier=NA | |||
|UniProt=P11438,Q3TA96,Q3TX84,Q9DC13 | |||
|association_with_transcript=73bp_to_ENSMUST00000033824,NM_010684,uc009kxa.1,uc009kxb.1_5end | |||
|cluster_id=chr8:13159208..13159215,+ | |||
|description=CAGE_peak_3_at_Lamp1_5end | |||
|id=chr8:13159208..13159215,+ | |||
|ontology_enrichment_celltype=CL:0000333!8.53e-07!10;CL:0000095!8.53e-07!10;CL:0000243!8.53e-07!10;CL:0000123!8.53e-07!10;CL:0000125!8.53e-07!10;CL:0000030!8.53e-07!10;CL:0000339!8.53e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.90e-07,10;CL:0000095,6.90e-07,10;CL:0000243,6.90e-07,10;CL:0000123,6.90e-07,10;CL:0000125,6.90e-07,10;CL:0000030,6.90e-07,10;CL:0000339,6.90e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.86e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.95e-07,51 | |||
|phase1_expression=1.44133962394315,10.4692622291808,11.8299802241279,2.11724947914781,2.00358291978539,3.86122325397347,3.50418960893289,0.903863264091034,0.281577444303333,0.234064526321993,0.68487187290202,0.797721589953364,0.513602189793617,0.611942816932982,0,1.01237633694913,0.699561878128147,1.26184866143295,0.548457734422955,0.42438965179803,2.12608225377674,1.19149141441062,0.783599367416806,7.1996590257033,9.1763712426868,10.9104073181854,7.32295393470427,4.52489588640367,1.52018735565099,1.76421090831952,2.66076612786366,1.90509202037889,2.46025915033828,15.8481681015439,0.288851619751275,0.664938581433969,0.612508068787107,0,1.5626706890476,0,0.588231488031014,0,0.485510353031154,4.15459499319405,3.64956952390252,5.50640256485045,7.82391344348039,7.41285531693518,7.46933021297204,9.3326351555656,5.5994568650145,7.18762821824858,0.167782606057736,0,0.336093799142464,7.20326420900652,7.44986943840768,6.70373719960675,1.21389876515759,0.528990979272033,1.26766280701236,8.80995783379743,13.3394219416671,11.6986963246582,9.88866362566974,11.3676818391376,6.89080254192331,6.53171119046643,0.518448061542388,1.08004750665353,0.841299845405528,2.57085885963423,3.53389665522582,0.61245399607477,0.575072826109418,1.83843757322004,3.30347642998166,3.57524546638526,3.68655679814984,0.923204014111357,1.28082701043374,0.52091337055676,3.07101298901519,2.8138130501584,2.44477196442896,2.65165726926301,2.42031857358475,1.4911955666024,5.14938114665652,5.81901012822248,2.02905142091174,3.44169550792555,8.15965600449301,6.47643829965381,10.3964226791627,4.92829575807069,2.10666630197628,4.26075806445144,3.37721805983729,3.5333957451034,1.40843419776681,3.84979432242953,2.54805239706646,0,2.81438353314578,3.54703811665138,5.05524445014783,3.9964357901671,1.8125651855302,3.26572705942614,1.56136794089522,0.608930956624282,2.07553947530453,1.05505848386836,1.29347577849275,1.25666591329675,4.94389935468748,7.22996784599558,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,3.72783522436244,2.63502717310392,2.51336048176146,2.04365644166873,1.07833612055328,1.19980546198682,1.52484272487678,2.99581278809645,3.20250421973039,3.01570445070875,3.47648640384553,3.06858548796397,2.49345653471472,3.24482526135515,1.42575109390443,1.8661045591514,8.33985102831127,4.41927897361595,1.17108398666433,0.229902104433473,1.44049703844279,1.05493372485001,1.02054748726992,1.0249097622788,1.59292931751539,1.03481348295606,0.431135985865684,0.189106080167819,0.879755620819744,0.657587197282725,0.278047249225598,1.74126083261083,0.823128545631774,2.38841120182192,0,1.28673953557358,1.70498099637356,1.44988040774851,1.87620847984877,1.44049649168812,1.65721314909647,0.983821158737019,1.07986979021165,0.930135779001631,2.68273401399619,1.28441876603886,1.31647879930784,0.820837320395476,1.70244500046297,3.65499968563331,3.95190207523891,3.08674763148855,1.68231958851302,1.44066457330998,2.31293148088659,1.85115396664481,1.06644125267617,0.928946687441754,1.03093969057675,1.4117846723634,2.00140239460383,2.09248188723815,2.37264530772256,2.14108641141214,4.52403375840485,1.98956472041151,3.50935356814416,0.898819408654221,1.08069024937347,2.19055400579804,1.13800740571849,0.913988100877831,1.1270773567308,0.610953983535943,1.74557238450863,1.82353131714828,3.03535378196435,3.98547399544926,4.08196692387575,4.56569506510662,4.44678940630723,1.00107063429656,1.37591296579242,1.12431056192427,0.811440485554012,1.68824011826692,0.25462585178142,2.30156909960649,1.29708181420028,0.823684239564244,8.62609239164127,3.34926852901653,2.18426371180192,4.04126204715379,5.38192240565737,5.78932225636041,1.47802552133284,0.947457058852424,1.30371981153621,1.35796068620151,2.11221223459652,1.84256883185997,1.42826184531608,2.53673742215138,0.630540576424764,2.6575762757853,2.07291199254733,2.29408640602033,1.38147985492716,1.73578870297814,9.04747703635634,15.7732648307426,1.96705709207614,2.48343071674259,5.13761887960934,4.45404409050372,2.62295912602681,3.28212205365685,0.315508219416257,1.95219372148319,1.50796378412959,2.86762557543062,2.00518806674155,1.13230612315533,3.64329631507405,2.33804686329049,1.97643888973262,2.89189184779626,2.83880170416537,1.95872164033981,1.79175655288934,2.14461159864296,2.65490276679926,0.485561272309963,0.604647113929502,1.13163047853539,1.18120757152309,0.614870295887855,2.58428293168221,0.363533729477506,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,2.7235168460303,0.720244376125241,1.03486947026204,1.50035924522115,0.886701168211368,1.07021290561242,1.97458824722545,3.34911444026059,5.86679270159276,6.99045833850607,1.10264199027481,2.96795255294664,2.09903754704677,2.11095237248546,2.02932984805332,2.1338316966858,2.91480836629851,4.45020724825223,0.683483523191411,0.82554747185289,0.925972636848558,0.941842285023455,0.546776910884101,1.37266903923914,1.01987057996313,0.839708713941948,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,0.86404272657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| |||
|short_description=p3@Lamp1 | |||
}} |
Latest revision as of 18:42, 1 October 2015
Short description: | p3@Lamp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lamp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1266 |
Association with transcript: | 73bp_to_ENSMUST00000033824, NM_010684, uc009kxa.1, uc009kxb.1_5end |
EntrezGene: | Lamp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.90e-07 | 10 |
neuron associated cell | 6.90e-07 | 10 |
glial cell (sensu Vertebrata) | 6.90e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.90e-07 | 10 |
glial cell | 6.90e-07 | 10 |
glioblast | 6.90e-07 | 10 |
glioblast (sensu Vertebrata) | 6.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.95e-07 | 51 |