FFCP PHASE1:Mm9::chr7:91558631..91558652,-: Difference between revisions
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{{FFCP|EntrezGene=11864|HGNC=|UniProt=Q61324|association_with_transcript=-162bp_to_ENSMUST00000085077,NM_007488,uc009ieh.1_5end|description=CAGE_peak_3_at_Arnt2_5end|id=chr7:91558631..91558652,-|ontology_enrichment_celltype=CL:0000221!4.89e-17!44;CL:0000133!4.89e-17!44;CL:0002319!2.30e-16!43;CL:0000055!3.02e-13!50;CL:0000540!5.56e-12!33;CL:0000047!5.56e-12!33;CL:0000031!5.56e-12!33;CL:0000404!5.56e-12!33;CL:0000117!2.17e-10!23;CL:0000337!2.17e-10!23;CL:0000393!7.62e-10!39;CL:0000211!7.62e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.23e-18,44;CL:0000133,1.23e-18,44;CL:0002319,8.19e-18,43;CL:0000540,4.91e-13,33;CL:0000047,4.91e-13,33;CL:0000031,4.91e-13,33;CL:0000404,4.91e-13,33;CL:0000117,2.78e-12,23;CL:0000337,2.78e-12,23;CL:0000393,5.39e-10,39;CL:0000211,5.39e-10,39;CL:0002321,6.39e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.62e-28!75;UBERON:0001016!1.62e-28!75;UBERON:0001017!6.94e-28!73;UBERON:0005743!6.94e-28!73;UBERON:0004121!2.06e-27!102;UBERON:0000924!2.06e-27!102;UBERON:0006601!2.06e-27!102;UBERON:0002346!8.93e-25!71;UBERON:0003075!8.93e-25!71;UBERON:0007284!8.93e-25!71;UBERON:0001049!1.33e-20!52;UBERON:0005068!1.33e-20!52;UBERON:0006241!1.33e-20!52;UBERON:0007135!1.33e-20!52;UBERON:0000033!3.50e-20!63;UBERON:0000955!5.49e-19!50;UBERON:0006238!5.49e-19!50;UBERON:0002616!9.31e-19!49;UBERON:0003056!2.19e-17!49;UBERON:0003080!1.82e-15!40;UBERON:0002780!2.27e-15!39;UBERON:0001890!2.27e-15!39;UBERON:0006240!2.27e-15!39;UBERON:0002020!4.37e-14!34;UBERON:0002791!5.70e-12!29;UBERON:0003528!5.70e-12!29;UBERON:0001893!5.70e-12!29;UBERON:0000153!8.34e-10!94;UBERON:0000956!2.12e-09!21;UBERON:0001869!2.12e-09!21;UBERON:0000203!2.12e-09!21;UBERON:0007811!3.38e-08!86;UBERON:0000468!4.52e-08!333;UBERON:0002619!8.67e-08!17;UBERON:0000922!2.96e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.02e-33,75;UBERON:0001017,2.55e-32,73;UBERON:0004121,2.23e-30,95;UBERON:0000924,2.23e-30,95;UBERON:0006601,2.23e-30,95;UBERON:0002346,1.75e-29,64;UBERON:0003075,1.75e-29,64;UBERON:0007284,1.75e-29,64;UBERON:0000073,6.30e-26,54;UBERON:0010371,2.07e-25,73;UBERON:0001049,2.56e-25,52;UBERON:0005068,2.56e-25,52;UBERON:0006241,2.56e-25,52;UBERON:0007135,2.56e-25,52;UBERON:0010314,3.76e-22,92;UBERON:0000955,4.33e-22,47;UBERON:0006238,4.33e-22,47;UBERON:0002616,8.40e-22,46;UBERON:0003056,1.94e-21,49;UBERON:0003080,8.92e-19,40;UBERON:0002780,1.19e-18,39;UBERON:0001890,1.19e-18,39;UBERON:0006240,1.19e-18,39;UBERON:0002020,5.29e-17,34;UBERON:0003528,2.59e-14,29;UBERON:0002791,2.59e-14,29;UBERON:0001893,2.59e-14,29;UBERON:0000956,1.44e-11,21;UBERON:0001869,1.44e-11,21;UBERON:0000203,1.44e-11,21;UBERON:0002619,1.64e-09,17;UBERON:0000025,1.74e-07,114;UBERON:0003076,4.23e-07,12;UBERON:0003057,4.23e-07,12;UBERON:0004111,6.86e-07,122|phase1_expression=1.60148847104794,0.697950815278722,0.454999239389536,0.30246421130683,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.799962113967033,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.10128051297009,2.34717403304412,6.1047043786525,2.63623419281366,4.08302788055995,0.839918529752175,2.87505128729943,0,0,0,0,0,0.515672092277442,5.05791152148994,2.11596391708813,5.70448263155561,1.35537812827653,0,0,0,0,3.29560121570245,4.61061966385865,2.07379224616955,3.10513658162888,2.10324961351382,1.42825492201902,3.75476519617743,3.30725157880376,3.92966431174769,3.67687514644008,1.10115880999389,3.31987079021488,1.84327839907492,3.29715719325485,3.84248103130121,0.52091337055676,1.95428099300967,1.68828783009504,2.44477196442896,3.83017161115768,2.84743361598206,1.67759501242771,2.19605960666234,1.36028808192214,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,1.7813056687779,2.08182392119363,0.304465478312141,1.38369298353635,1.3565037649736,1.99900802130698,1.0053327306374,0,0,0,0.323533699894818,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,2.38743269014442,2.78118912307642,2.55715457330331,2.28566849015516,1.1356888414743,3.46253837091075,0.995255764880744,2.77995034277042,0.210441855886474,3.3831315170303,3.44853156650209,2.52086981727489,1.65775299619287,3.19771546011241,2.17793324484245,3.09215691047105,0,4.095791865724,2.45837904218165,5.10258260075452,1.97276159184817,1.11218899690239,1.0447564995665,0.61734640922383,1.59227413454795,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,1.18372367792605,0.590292695242212,0.925602677324269,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0.0810688095458557,0,0,0,2.3131894342054,3.08713837137853,0,0,1.2797295032114,1.39342003116263,1.41754207454303,1.4117846723634,0.667134131534611,0.951128130562796,1.42358718463353,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11864 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q61324 | |||
|association_with_transcript=-162bp_to_ENSMUST00000085077,NM_007488,uc009ieh.1_5end | |||
|cluster_id=chr7:91558631..91558652,- | |||
|description=CAGE_peak_3_at_Arnt2_5end | |||
|id=chr7:91558631..91558652,- | |||
|ontology_enrichment_celltype=CL:0000221!4.89e-17!44;CL:0000133!4.89e-17!44;CL:0002319!2.30e-16!43;CL:0000055!3.02e-13!50;CL:0000540!5.56e-12!33;CL:0000047!5.56e-12!33;CL:0000031!5.56e-12!33;CL:0000404!5.56e-12!33;CL:0000117!2.17e-10!23;CL:0000337!2.17e-10!23;CL:0000393!7.62e-10!39;CL:0000211!7.62e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.23e-18,44;CL:0000133,1.23e-18,44;CL:0002319,8.19e-18,43;CL:0000540,4.91e-13,33;CL:0000047,4.91e-13,33;CL:0000031,4.91e-13,33;CL:0000404,4.91e-13,33;CL:0000117,2.78e-12,23;CL:0000337,2.78e-12,23;CL:0000393,5.39e-10,39;CL:0000211,5.39e-10,39;CL:0002321,6.39e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.62e-28!75;UBERON:0001016!1.62e-28!75;UBERON:0001017!6.94e-28!73;UBERON:0005743!6.94e-28!73;UBERON:0004121!2.06e-27!102;UBERON:0000924!2.06e-27!102;UBERON:0006601!2.06e-27!102;UBERON:0002346!8.93e-25!71;UBERON:0003075!8.93e-25!71;UBERON:0007284!8.93e-25!71;UBERON:0001049!1.33e-20!52;UBERON:0005068!1.33e-20!52;UBERON:0006241!1.33e-20!52;UBERON:0007135!1.33e-20!52;UBERON:0000033!3.50e-20!63;UBERON:0000955!5.49e-19!50;UBERON:0006238!5.49e-19!50;UBERON:0002616!9.31e-19!49;UBERON:0003056!2.19e-17!49;UBERON:0003080!1.82e-15!40;UBERON:0002780!2.27e-15!39;UBERON:0001890!2.27e-15!39;UBERON:0006240!2.27e-15!39;UBERON:0002020!4.37e-14!34;UBERON:0002791!5.70e-12!29;UBERON:0003528!5.70e-12!29;UBERON:0001893!5.70e-12!29;UBERON:0000153!8.34e-10!94;UBERON:0000956!2.12e-09!21;UBERON:0001869!2.12e-09!21;UBERON:0000203!2.12e-09!21;UBERON:0007811!3.38e-08!86;UBERON:0000468!4.52e-08!333;UBERON:0002619!8.67e-08!17;UBERON:0000922!2.96e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.02e-33,75;UBERON:0001017,2.55e-32,73;UBERON:0004121,2.23e-30,95;UBERON:0000924,2.23e-30,95;UBERON:0006601,2.23e-30,95;UBERON:0002346,1.75e-29,64;UBERON:0003075,1.75e-29,64;UBERON:0007284,1.75e-29,64;UBERON:0000073,6.30e-26,54;UBERON:0010371,2.07e-25,73;UBERON:0001049,2.56e-25,52;UBERON:0005068,2.56e-25,52;UBERON:0006241,2.56e-25,52;UBERON:0007135,2.56e-25,52;UBERON:0010314,3.76e-22,92;UBERON:0000955,4.33e-22,47;UBERON:0006238,4.33e-22,47;UBERON:0002616,8.40e-22,46;UBERON:0003056,1.94e-21,49;UBERON:0003080,8.92e-19,40;UBERON:0002780,1.19e-18,39;UBERON:0001890,1.19e-18,39;UBERON:0006240,1.19e-18,39;UBERON:0002020,5.29e-17,34;UBERON:0003528,2.59e-14,29;UBERON:0002791,2.59e-14,29;UBERON:0001893,2.59e-14,29;UBERON:0000956,1.44e-11,21;UBERON:0001869,1.44e-11,21;UBERON:0000203,1.44e-11,21;UBERON:0002619,1.64e-09,17;UBERON:0000025,1.74e-07,114;UBERON:0003076,4.23e-07,12;UBERON:0003057,4.23e-07,12;UBERON:0004111,6.86e-07,122 | |||
|phase1_expression=1.60148847104794,0.697950815278722,0.454999239389536,0.30246421130683,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.799962113967033,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.10128051297009,2.34717403304412,6.1047043786525,2.63623419281366,4.08302788055995,0.839918529752175,2.87505128729943,0,0,0,0,0,0.515672092277442,5.05791152148994,2.11596391708813,5.70448263155561,1.35537812827653,0,0,0,0,3.29560121570245,4.61061966385865,2.07379224616955,3.10513658162888,2.10324961351382,1.42825492201902,3.75476519617743,3.30725157880376,3.92966431174769,3.67687514644008,1.10115880999389,3.31987079021488,1.84327839907492,3.29715719325485,3.84248103130121,0.52091337055676,1.95428099300967,1.68828783009504,2.44477196442896,3.83017161115768,2.84743361598206,1.67759501242771,2.19605960666234,1.36028808192214,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,1.7813056687779,2.08182392119363,0.304465478312141,1.38369298353635,1.3565037649736,1.99900802130698,1.0053327306374,0,0,0,0.323533699894818,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,2.38743269014442,2.78118912307642,2.55715457330331,2.28566849015516,1.1356888414743,3.46253837091075,0.995255764880744,2.77995034277042,0.210441855886474,3.3831315170303,3.44853156650209,2.52086981727489,1.65775299619287,3.19771546011241,2.17793324484245,3.09215691047105,0,4.095791865724,2.45837904218165,5.10258260075452,1.97276159184817,1.11218899690239,1.0447564995665,0.61734640922383,1.59227413454795,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,1.18372367792605,0.590292695242212,0.925602677324269,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0.0810688095458557,0,0,0,2.3131894342054,3.08713837137853,0,0,1.2797295032114,1.39342003116263,1.41754207454303,1.4117846723634,0.667134131534611,0.951128130562796,1.42358718463353,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,2.27601481143698,2.28497025219458,4.50830942692322,2.03651327845314,2.13347735884388,4.41855665309007,2.65593455921881,0.738050739898011,0.627994911365499,2.22114895059241,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,3.58522948172457,3.05541154395339,1.64283173801951,1.00503754465089,0.714130922658041,0.390267295715598,1.26108115284953,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0.275936746304732,2.40825884981688,3.39913891117389,0.655739781506702,0.252470927204373,1.89304931649754,1.95219372148319,1.72338718186239,1.91175038362042,1.55959071857676,1.69845918473299,0.809621403349789,1.46127928955656,0.790575555893047,1.60660658210904,0.851640511249612,1.42452482933804,3.58351310577867,0.989820737835213,0,1.21390318077491,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,3.42116078659489,2.06973894052407,3.85806663056866,2.6601035046341,1.78368817602071,3.1264313914403,1.2178597964584,0.469343416127421,0,0,0.32977250588296,0.645857706783622,0.301564624640779,0.238744688006273,0,0,2.41052892613663,0,1.44470807574256,0.370389054739423,0,0,0,0,0,0,0,2.68885594543965,1.21991680276109,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.992750942742586,0.194451188344048,0.387479470433193,0.675824501963113,2.58185925020659,0.911430693907651,2.62148361064277,1.20792060413003,0.576060012515731,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,1.68914227906064,0.73260649706906,0.428736758158132,0,1.6942555278512,2.30162618253588,2.29158205375759,1.03111909406213,1.37016503954128,3.7769694869485,6.75022500231806,1.80128481289688,1.35942722695261,1.55328093525546,1.66059756134683,4.38927360741134,2.90247129782028,1.21553358534147,2.51535795153579,2.38996560985018,0.222246727801615,1.23621034343337,0.320919209591815,0.252697211763798,1.2673964994512,0.754505365544305,0.561849044819294,0.640251524048693,0.918967503289812,0.952587382566147,1.50649623728312,0.77163688185482,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0.238436189947321,0.872078499793971,1.31753132581463,0.676916863133412,1.09756783723664,0.263069711437843,1.08643291076689,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.99848462350357,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0 | |||
|short_description=p3@Arnt2 | |||
}} |
Latest revision as of 04:52, 27 September 2015
Short description: | p3@Arnt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arnt2_5end |
Coexpression cluster: | NA |
Association with transcript: | -162bp_to_ENSMUST00000085077, NM_007488, uc009ieh.1_5end |
EntrezGene: | Arnt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.23e-18 | 44 |
neurectodermal cell | 1.23e-18 | 44 |
neural cell | 8.19e-18 | 43 |
neuron | 4.91e-13 | 33 |
neuronal stem cell | 4.91e-13 | 33 |
neuroblast | 4.91e-13 | 33 |
electrically signaling cell | 4.91e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.78e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.78e-12 | 23 |
electrically responsive cell | 5.39e-10 | 39 |
electrically active cell | 5.39e-10 | 39 |
embryonic cell | 6.39e-07 | 70 |