FFCP PHASE1:Mm9::chr7:51723458..51723503,+: Difference between revisions
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{{FFCP|EntrezGene=66124|HGNC=|UniProt=D6RDE6|association_with_transcript=0bp_to_ENSMUST00000136679,ENSMUST00000149341,uc009gpn.1_5end|description=CAGE_peak_2_at_Josd2_5end|id=chr7:51723458..51723503,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.23e-09!75;UBERON:0001016!1.23e-09!75;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000033!1.17e-07!63;UBERON:0000955!1.48e-07!50;UBERON:0006238!1.48e-07!50;UBERON:0002616!3.09e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.34e-10,92;UBERON:0001016,1.23e-09,75;UBERON:0001017,4.41e-09,73;UBERON:0004121,6.92e-08,95;UBERON:0000924,6.92e-08,95;UBERON:0006601,6.92e-08,95|phase1_expression=22.1005409004616,8.37540978334467,5.45999087267443,8.16653370528441,7.01254021924886,10.7442734023609,11.9142446703718,3.09895976259783,1.83025338797167,3.04283884218592,2.91070545983358,3.74929147278081,1.88320802924326,4.54586092578786,11.3257319017325,14.5782192520675,30.0811607595103,5.20512572841092,4.52477630898938,4.2438965179803,12.3312770719051,8.63831275447702,12.015190300391,9.43955294481099,11.9292826154928,8.6134794617253,9.04600191934057,10.3426191689227,9.88121781173144,8.82105454159758,9.75614246883341,33.0215950199008,28.9080450164748,31.6963362030877,20.2196133825892,26.0988393212833,20.2127662699745,2.09265815368454,3.906676722619,2.61761871986899,3.52938892818609,3.41522742479223,1.45653105909346,15.2335149750449,11.8611009526832,14.3166466686112,49.2906546939265,24.41881751461,30.0970070346226,26.053606475954,21.8378817735566,34.5006154475932,2.68452169692378,4.35217285206807,1.68046899571232,6.68874533693462,19.1977404758967,9.28209766099396,3.23706337375356,5.28990979272033,6.33831403506179,19.6529828600097,16.8966011261116,31.9464399634897,40.543520865246,25.5772841380596,29.9600110518405,62.2433654620918,8.91730665852908,9.31540974488665,10.3059231062177,13.4255962669788,19.436431603742,7.10446635446733,5.46319184803947,8.27296907949019,42.9451935897616,26.6866536598042,19.3544231902867,6.06676923558892,3.93396867490361,4.68822033501084,39.3648028591947,24.1987922313622,27.6564828476026,8.54422897873636,4.27115042397309,5.96478226640962,25.0653699932839,18.4394606660557,9.85539261585705,12.0459342777394,9.51959867190851,11.873470216032,5.84798775702902,8.96053774194671,18.679107877523,16.3613109674935,18.7045923314066,18.726997449048,30.844708931093,14.115912515575,15.2883143823987,0,6.71122227134764,4.30711771307668,4.04419556011827,9.02052649780574,3.88406825470758,10.0940654564081,12.1439728736295,12.7875500891099,7.61031140944993,7.23468674652588,6.82014501387088,10.6816602630224,5.93267922562497,16.1951279750301,10.6153266233985,20.544389943321,14.3546986999256,19.8798853785441,11.1835056730873,21.6657789788545,24.5052646971742,9.19645398750929,8.98613433794402,11.9980546198682,8.89491589511453,28.1606402081067,34.7700458142156,6.15706325353036,27.638066910572,20.9686675010871,34.7006034414465,28.0677385107221,8.24898847187562,13.43595282589,7.07623723614289,15.1518136238261,11.0602376518298,15.8632452059096,10.803727788321,13.7141384230501,10.8858398642125,13.0675994690547,10.5882948752494,13.9699820199068,6.89817577385095,9.8335161687266,7.38994721488585,12.4941567483718,11.1218899690239,9.4028084960985,9.26019613835746,11.5439874754726,18.9597560574573,14.1541348913093,9.94572247884574,18.4341937556597,18.2930326785255,21.7875094367828,20.8335367314985,26.1696428224047,21.7516629171203,33.2523540993083,26.2907933371627,25.3380792936758,25.013097186849,36.1168420974009,38.8319597724649,57.6027950455809,57.0830299756732,48.1801043349735,31.5434922846191,6.89460902941206,6.27795687669216,5.55346189993443,10.2378360256912,8.82499353069666,8.76298736990235,9.88249270654378,8.00560957841533,10.6526350623033,8.0669940462567,10.2113351928887,10.304743560811,9.74886713001639,9.94316844307513,7.19055526923377,8.64552199498777,10.5544874824815,13.845756769575,10.3966146474853,9.01661885384643,9.77526373657508,11.8311017172252,5.6810014111158,6.57659986092276,8.41377843483732,7.69293766422737,9.37818445805684,4.74324203339438,11.0117769772622,14.9384836286034,13.2668646307064,15.8230894683032,15.6765153839071,16.0414286622294,8.63088412352432,12.1601420081277,7.68771956926628,1.43768206527355,4.09355042435354,6.55279113540577,4.54641980304801,6.27890947326693,6.27176577772377,12.3784637411625,16.1067700004912,8.96307370431142,13.4098617762399,9.38760993154008,11.0554129911598,15.9489239393629,12.2934198150413,13.5566223931324,13.730810758224,11.0023790373666,14.2561083802692,13.296743603674,13.018415272336,7.53956419696361,6.52686820582452,8.35999264132362,17.3840150171981,41.9037039868137,31.6471553798949,11.8033160671206,42.4151157703347,25.2406575533005,15.6175497718655,13.3562506594335,23.1799734013975,21.6114713859922,23.7784285862619,20.2405350837447,19.5811424800579,14.6256477840214,24.4204200480573,12.34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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66124 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D6RDE6 | |||
|association_with_transcript=0bp_to_ENSMUST00000136679,ENSMUST00000149341,uc009gpn.1_5end | |||
|cluster_id=chr7:51723458..51723503,+ | |||
|description=CAGE_peak_2_at_Josd2_5end | |||
|id=chr7:51723458..51723503,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-09!75;UBERON:0001016!1.23e-09!75;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000033!1.17e-07!63;UBERON:0000955!1.48e-07!50;UBERON:0006238!1.48e-07!50;UBERON:0002616!3.09e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.34e-10,92;UBERON:0001016,1.23e-09,75;UBERON:0001017,4.41e-09,73;UBERON:0004121,6.92e-08,95;UBERON:0000924,6.92e-08,95;UBERON:0006601,6.92e-08,95 | |||
|phase1_expression=22.1005409004616,8.37540978334467,5.45999087267443,8.16653370528441,7.01254021924886,10.7442734023609,11.9142446703718,3.09895976259783,1.83025338797167,3.04283884218592,2.91070545983358,3.74929147278081,1.88320802924326,4.54586092578786,11.3257319017325,14.5782192520675,30.0811607595103,5.20512572841092,4.52477630898938,4.2438965179803,12.3312770719051,8.63831275447702,12.015190300391,9.43955294481099,11.9292826154928,8.6134794617253,9.04600191934057,10.3426191689227,9.88121781173144,8.82105454159758,9.75614246883341,33.0215950199008,28.9080450164748,31.6963362030877,20.2196133825892,26.0988393212833,20.2127662699745,2.09265815368454,3.906676722619,2.61761871986899,3.52938892818609,3.41522742479223,1.45653105909346,15.2335149750449,11.8611009526832,14.3166466686112,49.2906546939265,24.41881751461,30.0970070346226,26.053606475954,21.8378817735566,34.5006154475932,2.68452169692378,4.35217285206807,1.68046899571232,6.68874533693462,19.1977404758967,9.28209766099396,3.23706337375356,5.28990979272033,6.33831403506179,19.6529828600097,16.8966011261116,31.9464399634897,40.543520865246,25.5772841380596,29.9600110518405,62.2433654620918,8.91730665852908,9.31540974488665,10.3059231062177,13.4255962669788,19.436431603742,7.10446635446733,5.46319184803947,8.27296907949019,42.9451935897616,26.6866536598042,19.3544231902867,6.06676923558892,3.93396867490361,4.68822033501084,39.3648028591947,24.1987922313622,27.6564828476026,8.54422897873636,4.27115042397309,5.96478226640962,25.0653699932839,18.4394606660557,9.85539261585705,12.0459342777394,9.51959867190851,11.873470216032,5.84798775702902,8.96053774194671,18.679107877523,16.3613109674935,18.7045923314066,18.726997449048,30.844708931093,14.115912515575,15.2883143823987,0,6.71122227134764,4.30711771307668,4.04419556011827,9.02052649780574,3.88406825470758,10.0940654564081,12.1439728736295,12.7875500891099,7.61031140944993,7.23468674652588,6.82014501387088,10.6816602630224,5.93267922562497,16.1951279750301,10.6153266233985,20.544389943321,14.3546986999256,19.8798853785441,11.1835056730873,21.6657789788545,24.5052646971742,9.19645398750929,8.98613433794402,11.9980546198682,8.89491589511453,28.1606402081067,34.7700458142156,6.15706325353036,27.638066910572,20.9686675010871,34.7006034414465,28.0677385107221,8.24898847187562,13.43595282589,7.07623723614289,15.1518136238261,11.0602376518298,15.8632452059096,10.803727788321,13.7141384230501,10.8858398642125,13.0675994690547,10.5882948752494,13.9699820199068,6.89817577385095,9.8335161687266,7.38994721488585,12.4941567483718,11.1218899690239,9.4028084960985,9.26019613835746,11.5439874754726,18.9597560574573,14.1541348913093,9.94572247884574,18.4341937556597,18.2930326785255,21.7875094367828,20.8335367314985,26.1696428224047,21.7516629171203,33.2523540993083,26.2907933371627,25.3380792936758,25.013097186849,36.1168420974009,38.8319597724649,57.6027950455809,57.0830299756732,48.1801043349735,31.5434922846191,6.89460902941206,6.27795687669216,5.55346189993443,10.2378360256912,8.82499353069666,8.76298736990235,9.88249270654378,8.00560957841533,10.6526350623033,8.0669940462567,10.2113351928887,10.304743560811,9.74886713001639,9.94316844307513,7.19055526923377,8.64552199498777,10.5544874824815,13.845756769575,10.3966146474853,9.01661885384643,9.77526373657508,11.8311017172252,5.6810014111158,6.57659986092276,8.41377843483732,7.69293766422737,9.37818445805684,4.74324203339438,11.0117769772622,14.9384836286034,13.2668646307064,15.8230894683032,15.6765153839071,16.0414286622294,8.63088412352432,12.1601420081277,7.68771956926628,1.43768206527355,4.09355042435354,6.55279113540577,4.54641980304801,6.27890947326693,6.27176577772377,12.3784637411625,16.1067700004912,8.96307370431142,13.4098617762399,9.38760993154008,11.0554129911598,15.9489239393629,12.2934198150413,13.5566223931324,13.730810758224,11.0023790373666,14.2561083802692,13.296743603674,13.018415272336,7.53956419696361,6.52686820582452,8.35999264132362,17.3840150171981,41.9037039868137,31.6471553798949,11.8033160671206,42.4151157703347,25.2406575533005,15.6175497718655,13.3562506594335,23.1799734013975,21.6114713859922,23.7784285862619,20.2405350837447,19.5811424800579,14.6256477840214,24.4204200480573,12.3487874131194,16.2039699337202,6.51547837414304,10.8880281161873,38.4960901185892,18.2085477116236,21.4649725444973,25.0844756075344,35.7315290385735,33.817866273832,17.573123935439,18.9037539328303,19.250858432775,27.1791611824802,34.7881408297496,47.442349894166,16.3411010761818,12.2441543941291,20.3093133538925,13.9319072770535,9.93105308396732,12.8425548673491,12.6702745863633,12.7875278628132,6.10146440965647,6.56679419677843,11.467476698858,12.2015827176695,11.1410454420175,6.81536051688161,6.80422360817878,7.87876318776294,7.86998258900597,37.826761610144,10.5939946094669,10.7321171340876,10.5560880600736,17.1415295874269,15.9932246433599,9.37990510146743,5.60928818979723,4.47844647435706,7.04819866402561,13.3653886522116,12.6534397432454,11.1825706919767,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| |||
|short_description=p2@Josd2 | |||
}} |
Latest revision as of 19:17, 26 September 2015
Short description: | p2@Josd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Josd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000136679, ENSMUST00000149341, uc009gpn.1_5end |
EntrezGene: | Josd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.34e-10 | 92 |
nervous system | 1.23e-09 | 75 |
central nervous system | 4.41e-09 | 73 |
ectoderm-derived structure | 6.92e-08 | 95 |
ectoderm | 6.92e-08 | 95 |
presumptive ectoderm | 6.92e-08 | 95 |