FFCP PHASE1:Hg19::chrY:21906623..21906637,-: Difference between revisions
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{{FFCP|EntrezGene=8284|HGNC=11115|UniProt=|association_with_transcript=9bp_to_ENST00000382806_5end|coexpression_cluster_id=C967|description=CAGE_peak_3_at_KDM5D_5end|id=chrY:21906623..21906637,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000084;1.24e-07;25!CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18!CL:0000624;6.71e-07;6|ontology_enrichment_celltype_v019_2=CL:0000838,3.77e-08,52;CL:0000542,6.99e-08,53;CL:0000051,6.99e-08,53;CL:0000084,8.83e-08,25;CL:0000827,8.83e-08,25;CL:0000791,4.63e-07,18;CL:0000789,4.63e-07,18;CL:0002420,4.63e-07,18;CL:0002419,4.63e-07,18;CL:0000790,4.63e-07,18;CL:0000624,5.68e-07,6|ontology_enrichment_development_v019=CL:0000790;5.77e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-08,114|phase1_expression=0,0,0,0,1.34088328328186,0,0,0,0,0,0,3.05817920982241,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0.767658796194425,0.464448369948228,0.919421224478927,0,0,1.85921281392724,3.41206157969812,0.587200878669695,3.32397245119126,0.601633342410425,0.868043482863407,0.895661896959697,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0.22465726229299,0.300353785683013,0.32145117339416,0,0.59675003159727,0.547992461293902,0,0,0,2.56038133539904,0.800791974072025,0,0,0,0,0,5.73409842187843,1.32171328579026,0,0,6.09800287352883,3.14408610199332,0,2.34061093546949,3.58514493296949,6.15482147455153,5.84480185223734,4.2335973616366,3.82987679717288,4.87374568083967,8.12411591295047,2.0494611156108,1.69077151827842,2.63100647365882,2.48715016007264,6.66547097190621,4.89345658434799,8.56130649887082,10.4535523804977,4.87230173599535,2.68254345521345,5.15441168223945,9.36172860472161,0,0,0,6.02300476311091,4.60751800155906,0,0,0,3.22570789159572,2.13952156626806,1.73789284659359,0,1.34140171940727,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0,0,0,1.17881167947941,2.18577172975525,0,0,0,0.132957960518865,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,1.67360306382335,0,0,0,0,0.81014194788176,0.714397826272638,0.44905874525234,0.675668882899933,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.933633106199299,0.67355336034844,0.163461903113459,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0.423863802319124,1.20036438433761,0.412210116953756,1.54584324027377,0.37223371266318,1.68776332241266,0.876933046450788,1.51460264546469,0.460249493211497,0.484938170456436,2.13005755509969,0.503760491138201,0.339121184620975,0,0,1.43402297694502,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,3.5317047953172,0,0,0.658501712451753,0,0,0,0,2.07986957055916,0,0,0.352226082707465,0.721832238805369,0.925971025153221,0.761016608938393,0,0,0.984868024349589,0,0,0,0,0.850650583454319,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.411309970813294,0,1.14330573052231,0.448524337381443,0.87192013766656,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,2.56139988262505,2.15627574859517,1.66845947163673,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0.473107245101804,0.702848489956279,0,0,0,0.664225598535437,0,0.173767228936166,0.979005787313703,0,0,1.2942852049117,2.66818894508611,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.601519410909855,0.552485933615378,0.229628896329213,0,0.131124414959424,1.35359883872224,0.847168708148562,1.56869953835371,0,1.26661954671451,1.13733384070897,0,0,0,0,0,0,0,0,7.45483580596178,5.49014447152291,0,0.984043937099117,0,0.9273691048295,0,0,0.574265537996172,0,0,0,0,0,0.551346289938122,0.644521469209642,0,0,0,0,0.768760269460425,5.74257206225629,0.50578890427775,0,0.31481234683064,0,0,1.06461206063404,0,0.55597265731176,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0,0,0,0,0,0.48763373908959,0.243713489631284,2.11300293513511,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0.392996164052485,0,0,0,0.658589785919804,0,0,0,0,0,0.941438007767792,0,5.05414427002877,0,0,0,0,0,2.85878130549347,2.87953591160336,0,0,0,0.427296284509893,0,0,0.929015875628594,0,1.56512055366511,2.55082036366116,0,0.957526850661834,2.32840940996271,0,1.68478306868075,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0,1.67043704337145,0,0.540911356951966,0,0,0,0.146508179271894,0,0.445773537109913,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0,0,0.329607748453519,1.68900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| {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11115 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000382806_5end | |||
|cluster_id=chrY:21906623..21906637,- | |||
|coexpression_cluster_id=C967 | |||
|description=CAGE_peak_3_at_KDM5D_5end | |||
|id=chrY:21906623..21906637,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.24e-07;25!CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18!CL:0000624;6.71e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.77e-08,52;CL:0000542,6.99e-08,53;CL:0000051,6.99e-08,53;CL:0000084,8.83e-08,25;CL:0000827,8.83e-08,25;CL:0000791,4.63e-07,18;CL:0000789,4.63e-07,18;CL:0002420,4.63e-07,18;CL:0002419,4.63e-07,18;CL:0000790,4.63e-07,18;CL:0000624,5.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-08,114 | |||
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| |||
|short_description=p3@KDM5D | |||
}} |
Latest revision as of 17:30, 16 September 2015
Short description: | p3@KDM5D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KDM5D_5end |
Coexpression cluster: | C967_CD4_CD19_CD8_Natural_Dendritic_lung_Basophils |
Association with transcript: | 9bp_to_ENST00000382806_5end |
EntrezGene: | KDM5D |
HGNC: | 11115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.77e-08 | 52 |
lymphocyte | 6.99e-08 | 53 |
common lymphoid progenitor | 6.99e-08 | 53 |
T cell | 8.83e-08 | 25 |
pro-T cell | 8.83e-08 | 25 |
mature alpha-beta T cell | 4.63e-07 | 18 |
alpha-beta T cell | 4.63e-07 | 18 |
immature T cell | 4.63e-07 | 18 |
mature T cell | 4.63e-07 | 18 |
immature alpha-beta T cell | 4.63e-07 | 18 |
CD4-positive, alpha-beta T cell | 5.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.42e-08 | 114 |