FFCP PHASE1:Mm9::chr7:150085890..150085907,-: Difference between revisions
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{{FFCP|EntrezGene=21823|HGNC=|MCL_coexpression_id=55|UniProt=P24529|association_with_transcript=11bp_to_ENSMUST00000000219_5end|description=CAGE_peak_1_at_Th_5end|id=chr7:150085890..150085907,-|ontology_enrichment_celltype=CL:0000117!5.21e-07!23;CL:0000337!5.21e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.36e-13!71;UBERON:0003075!4.36e-13!71;UBERON:0007284!4.36e-13!71;UBERON:0004121!1.46e-12!102;UBERON:0000924!1.46e-12!102;UBERON:0006601!1.46e-12!102;UBERON:0000073!5.26e-10!75;UBERON:0001016!5.26e-10!75;UBERON:0001017!5.93e-10!73;UBERON:0005743!5.93e-10!73;UBERON:0000955!2.29e-09!50;UBERON:0006238!2.29e-09!50;UBERON:0000033!2.80e-09!63;UBERON:0002616!8.20e-09!49;UBERON:0001049!1.86e-08!52;UBERON:0005068!1.86e-08!52;UBERON:0006241!1.86e-08!52;UBERON:0007135!1.86e-08!52;UBERON:0003056!4.07e-07!49;UBERON:0002369!8.92e-07!7;UBERON:0006858!8.92e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.81e-09,7;UBERON:0006858,7.81e-09,7;UBERON:0002420,5.30e-08,8;UBERON:0007245,5.30e-08,8;UBERON:0010009,5.30e-08,8;UBERON:0010011,5.30e-08,8;UBERON:0000454,5.30e-08,8;UBERON:0000073,2.35e-07,54|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1505699558739,19.0436752537932,8.87363964908651,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,2.28520787523043,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,79.2834343195599,69.3342245802569,96.4649028849209,8.96826756565318,5.21479568533735,6.25096044668112,130.936826531648,96.2324063154173,197.262537879862,0.589257170947335,0.284743361598206,5.03278503728312,0.302904773332736,0.377857800533928,0,0,0,0,0,0,3.37066608316204,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,700.350012107843,248.777958582639,377.232727628743,315.712615743544,457.443214077209,396.15635434019,271.439837272099,0,3.90418263683761,0,0,0.220841518460394,0,0,7.61230072230023,5.86450779077674,0.255457055208591,0,0,0,7.04016005202667,4.57500602818627,4.14659361972453,2.43354048269187,1.53429274398198,61.7130492341893,33.2594589288903,0.305518091550949,0,0,0.420883711772948,2.60240885925407,2.29902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,1.39323986772945,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.987359099480883,0,0.324275238183423,0,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,5.75878276445132,17.4177503895329,1.54640953586512,0.403367049246685,0.22237804384487,1.33157938278791,0,0.164698954724011,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,10.8110703543257,24.6776787237014,0,5.29493452397817,6.7883370508669,3.71719845418688,0.252946148497029,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,5.11626811780309,0,0.339490171550376,0.469380496577004,0.837531287209079,0,0.195133647857799,0,0,0,0.81931657357869,0.172684981865896,0,0,0,0,0,10.1146871692309,18.4022347949759,0,0.252470927204373,0.631016438832513,0,0.646270193198397,0.477937595905104,0,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,165.480477957231,0,1.78065603667255,1.30309567482861,0,0,0.485561272309963,0.302323556964751,1.13163047853539,0.885905678642318,0.614870295887855,1.80899805217755,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.08036656418786,0.905510786479282,0.643011105094777,0.354680467284547,1.60531935841864,3.78462747384878,4.87143918583359,0,0,7.71849393192367,1.31909002353184,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,2.96680483216816,0,0,0,0,0,0,0,0,0,0.954670618015114,1.42351197111511,1.82987520414164,0.324016022465404,0.836353184057875,0.218362563746178,1.21377911746339,0.41326727862668,0,0,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0,0,0,0,1.41907650703115,0.308132871494482,0.129920822977795,0.895133478337407,0.198681354781265,0,0.590758108698309,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,10.0458588896739,0,0,0.428736758158132,0,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0,0.453142408984205,1.03552062350364,3.63255716544618,4.38927360741134,8.53668028770671,3.64660075602441,5.8691685535835,3.30918315210025,2.889207461421,3.09052585858341,2.88827288632634,5.05394423527595,3.04175159868288,3.01802146217722,3.65201879132541,3.39333307745807,2.87177344778066,3.33405583898152,2.89710814862139,2.12200142510076,4.94503080963968,2.35518272215036,5.48590803816665,1.4198064492747,2.86123427936785,2.47088908274958,2.25862512996793,2.79228206042532,3.65855945745545,2.36762740294059,3.66671107383827,1.68342681497322,2.37270036248348,2.65962102414021,2.04615521584845,3.40861050609125,1.73615949883027,4.49659040288303,3.50897412668113,1.50409737833809,1.91288332068843,5.07360263974886,3.2461496986859|short_description=p1@Th}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21823 | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|TSSclassifier=NA | |||
|UniProt=P24529 | |||
|association_with_transcript=11bp_to_ENSMUST00000000219_5end | |||
|cluster_id=chr7:150085890..150085907,- | |||
|description=CAGE_peak_1_at_Th_5end | |||
|id=chr7:150085890..150085907,- | |||
|ontology_enrichment_celltype=CL:0000117!5.21e-07!23;CL:0000337!5.21e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.36e-13!71;UBERON:0003075!4.36e-13!71;UBERON:0007284!4.36e-13!71;UBERON:0004121!1.46e-12!102;UBERON:0000924!1.46e-12!102;UBERON:0006601!1.46e-12!102;UBERON:0000073!5.26e-10!75;UBERON:0001016!5.26e-10!75;UBERON:0001017!5.93e-10!73;UBERON:0005743!5.93e-10!73;UBERON:0000955!2.29e-09!50;UBERON:0006238!2.29e-09!50;UBERON:0000033!2.80e-09!63;UBERON:0002616!8.20e-09!49;UBERON:0001049!1.86e-08!52;UBERON:0005068!1.86e-08!52;UBERON:0006241!1.86e-08!52;UBERON:0007135!1.86e-08!52;UBERON:0003056!4.07e-07!49;UBERON:0002369!8.92e-07!7;UBERON:0006858!8.92e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.81e-09,7;UBERON:0006858,7.81e-09,7;UBERON:0002420,5.30e-08,8;UBERON:0007245,5.30e-08,8;UBERON:0010009,5.30e-08,8;UBERON:0010011,5.30e-08,8;UBERON:0000454,5.30e-08,8;UBERON:0000073,2.35e-07,54 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1505699558739,19.0436752537932,8.87363964908651,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,2.28520787523043,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,79.2834343195599,69.3342245802569,96.4649028849209,8.96826756565318,5.21479568533735,6.25096044668112,130.936826531648,96.2324063154173,197.262537879862,0.589257170947335,0.284743361598206,5.03278503728312,0.302904773332736,0.377857800533928,0,0,0,0,0,0,3.37066608316204,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,700.350012107843,248.777958582639,377.232727628743,315.712615743544,457.443214077209,396.15635434019,271.439837272099,0,3.90418263683761,0,0,0.220841518460394,0,0,7.61230072230023,5.86450779077674,0.255457055208591,0,0,0,7.04016005202667,4.57500602818627,4.14659361972453,2.43354048269187,1.53429274398198,61.7130492341893,33.2594589288903,0.305518091550949,0,0,0.420883711772948,2.60240885925407,2.29902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,1.39323986772945,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.987359099480883,0,0.324275238183423,0,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,5.75878276445132,17.4177503895329,1.54640953586512,0.403367049246685,0.22237804384487,1.33157938278791,0,0.164698954724011,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,10.8110703543257,24.6776787237014,0,5.29493452397817,6.7883370508669,3.71719845418688,0.252946148497029,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,5.11626811780309,0,0.339490171550376,0.469380496577004,0.837531287209079,0,0.195133647857799,0,0,0,0.81931657357869,0.172684981865896,0,0,0,0,0,10.1146871692309,18.4022347949759,0,0.252470927204373,0.631016438832513,0,0.646270193198397,0.477937595905104,0,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,165.480477957231,0,1.78065603667255,1.30309567482861,0,0,0.485561272309963,0.302323556964751,1.13163047853539,0.885905678642318,0.614870295887855,1.80899805217755,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.08036656418786,0.905510786479282,0.643011105094777,0.354680467284547,1.60531935841864,3.78462747384878,4.87143918583359,0,0,7.71849393192367,1.31909002353184,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,2.96680483216816,0,0,0,0,0,0,0,0,0,0.954670618015114,1.42351197111511,1.82987520414164,0.324016022465404,0.836353184057875,0.218362563746178,1.21377911746339,0.41326727862668,0,0,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0,0,0,0,1.41907650703115,0.308132871494482,0.129920822977795,0.895133478337407,0.198681354781265,0,0.590758108698309,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,10.0458588896739,0,0,0.428736758158132,0,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0,0.453142408984205,1.03552062350364,3.63255716544618,4.38927360741134,8.53668028770671,3.64660075602441,5.8691685535835,3.30918315210025,2.889207461421,3.09052585858341,2.88827288632634,5.05394423527595,3.04175159868288,3.01802146217722,3.65201879132541,3.39333307745807,2.87177344778066,3.33405583898152,2.89710814862139,2.12200142510076,4.94503080963968,2.35518272215036,5.48590803816665,1.4198064492747,2.86123427936785,2.47088908274958,2.25862512996793,2.79228206042532,3.65855945745545,2.36762740294059,3.66671107383827,1.68342681497322,2.37270036248348,2.65962102414021,2.04615521584845,3.40861050609125,1.73615949883027,4.49659040288303,3.50897412668113,1.50409737833809,1.91288332068843,5.07360263974886,3.2461496986859 | |||
|short_description=p1@Th | |||
}} |
Latest revision as of 05:51, 26 September 2015
Short description: | p1@Th |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Th_5end |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | 11bp_to_ENSMUST00000000219_5end |
EntrezGene: | Th |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 7.81e-09 | 7 |
adrenal/interrenal gland | 7.81e-09 | 7 |
basal ganglion | 5.30e-08 | 8 |
nuclear complex of neuraxis | 5.30e-08 | 8 |
aggregate regional part of brain | 5.30e-08 | 8 |
collection of basal ganglia | 5.30e-08 | 8 |
cerebral subcortex | 5.30e-08 | 8 |
regional part of nervous system | 2.35e-07 | 54 |