FFCP PHASE1:Hg19::chrX:46937857..46937871,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9989 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000469346_5end | |||
|cluster_id=chrX:46937857..46937871,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_RGN_5end | |||
|id=chrX:46937857..46937871,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.88e-07!12;CL:0000417!6.88e-07!12;CL:0000668!6.88e-07!12;CL:0000414!6.88e-07!12;CL:0000412!6.88e-07!12;CL:0000182!6.88e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.78e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.38e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.73e-13;82!UBERON:0006215;6.80e-08;3!UBERON:0006241;7.00e-07;3!UBERON:0003057;7.00e-07;3!UBERON:0004161;8.72e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.41e-25;41!UBERON:0001890;1.41e-25;41!UBERON:0000073;1.52e-25;53!UBERON:0002616;1.52e-25;53!UBERON:0001893;5.10e-25;34!UBERON:0002619;2.96e-24;22!UBERON:0001869;5.39e-24;32!UBERON:0003528;6.17e-24;34!UBERON:0002020;6.17e-24;34!UBERON:0002791;1.59e-23;32!UBERON:0000956;7.10e-21;25!UBERON:0000203;7.10e-21;25!UBERON:0001950;1.25e-20;20!UBERON:0000955;3.23e-18;68!UBERON:0007023;9.53e-18;114!UBERON:0001017;5.01e-17;75!UBERON:0004732;6.01e-15;13!UBERON:0001016;2.38e-14;83!UBERON:0004733;5.00e-13;12!UBERON:0002028;5.00e-13;12!UBERON:0002298;7.44e-12;6!UBERON:0000200;3.10e-11;6!UBERON:0002420;5.69e-10;9!UBERON:0000125;5.69e-10;9!UBERON:0007245;5.69e-10;9!UBERON:0002308;5.69e-10;9!UBERON:0010009;5.69e-10;9!UBERON:0010011;5.69e-10;9!UBERON:0000454;5.69e-10;9!UBERON:0001871;8.70e-10;6!UBERON:0002368;8.22e-09;33!UBERON:0002680;2.39e-08;9!UBERON:0001895;2.39e-08;9!UBERON:0002107;2.66e-08;19!UBERON:0006925;2.66e-08;19!UBERON:0011216;4.12e-08;132!UBERON:0002365;8.03e-08;31!UBERON:0002330;8.03e-08;31!UBERON:0000349;2.76e-07;5!UBERON:0002240;7.00e-07;3!UBERON:0005174;7.00e-07;3!UBERON:0001137;7.00e-07;3!UBERON:0009663;8.80e-07;7!UBERON:0000988;9.53e-07;3!UBERON:0001896;9.53e-07;3!UBERON:0006947;9.53e-07;3!UBERON:0005290;9.53e-07;3!UBERON:0004054;9.53e-07;3 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,3.99486180268024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0.487185025805993,0,0.276149695926898,0,1.06502877754984,0,1.01736355386293,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,13.7595810334868,10.6342183202653,0,3.56666471775029,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0,3.2632051389738,0,0,0,0,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.325378394664303,12.4679624093744,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,1.13841952129715,0,0,0,0,9.79095528078503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,1.9882952955326,2.11004124615769,0,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.394573622547734,0,0,3.87733098438087,1.11321717794222,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,1.68835014075571,7.62908681585416,4.75490817704266,2.65992857058193,1.53569778007781,0,0,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0.442287822516696,1.83309043480088,0,0,0,2.29163852134302,0.802577647298789,0.702793337176017,0,0,0,1.57833761139756,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.193978032976839,0,0,0,0,0.949661939338181,0.195551382734803,0.0801588202515337,0.85381197895741,0,0,0,0.343189995723929,0,0.372757606696298,0.235694034616795,0,0,0,0,1.80126086612937,1.09524303113594,0,0,0,1.95497680890578,0.916641696046735,0,1.19807400299395,0.858452096273142,2.23171457441873,0.470284307407084,0,3.49487848582361,1.6544468284517,2.39005989305383,1.75249214020881,0.688992370603241,0,3.97614844904652,2.58786471611994,0,0.137539436597234,0,0,0,1.39723980313457,0,4.09789677955831,1.57363764404994,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,11.1379697595343,7.95041333473328,2.97350799631566,1.3223260174269,0,0,2.45611048905698,2.67247318669432,1.65695622138878,0,0,0,0,3.26410682021684,3.2589686222951,3.982492497925,1.96723578425883,0,1.77213635993397,1.09823638411767,1.251909307065,1.14681839138014,1.77486482458964,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0.947015026375446,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.963438376446893,2.8339315265117,0.798169295285756,2.2562800066483,0.252071696221718,1.10651603942749,1.45328081068666,4.28308260777463,0,0,0,0,0.381382095467167,0,0,0.676892955143315,0,3.12605604493237,0,0,0.295712172434091,1.01306376927592,1.56215619722769,2.48024155801421,1.9024743058172,0,7.67560873600055,1.48863353516788,0,0,3.74991285114801,5.04425583328236,1.21393120847326,0.682986574053893,0.887023701626388,0,0.514464028312255,1.2914249265598,1.05236437700559,0,0,1.25588948560822,0.942693539496011,0,0.913158720509496,0,0.9555033757741,1.50100742770978,0,0,0,0,0,0,0,5.59295566466361,0,0,1.27016115057279,0,0,0,0,0.294450700845729,0,0,0.615976841137482,0,0,0,0,0.118920090777569,0,0,0,0.617393264863557,1.74847648403166,0,0.490296643507811,0,3.33724394095407,1.18818560130834,1.2679671827502,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,1.37618785021362,1.86341458096887,0,1.76777874496378,0.436350690340377,2.645134202577,0.371995018166751,0,0.432626562123789,0,0,0.506794004045748,0.101988829741982,0,0,0,0.757786982182394,0.535928260312357,0.829169439458779,2.48239190068549,0.213233981900981,0.95225772585496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| |||
|short_description=p4@RGN | |||
}} |
Latest revision as of 05:19, 25 September 2015
Short description: | p4@RGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RGN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_ENST00000469346_5end |
EntrezGene: | RGN |
HGNC: | 9989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.38e-08 | 12 |