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FFCP PHASE1:Mm9::chr11:113480632..113480660,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:113480632..113480660,+
|DHSsupport=NA
|short_description=p1@Sstr2
|DPIdataset=NA
|description=CAGE_peak_1_at_Sstr2_5end
|association_with_transcript=0bp_to_ENSMUST00000146390_5end
|EntrezGene=20606
|EntrezGene=20606
|HGNC=
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000146390_5end
|cluster_id=chr11:113480632..113480660,+
|description=CAGE_peak_1_at_Sstr2_5end
|id=chr11:113480632..113480660,+
|ontology_enrichment_celltype=CL:0000540!1.31e-14!33;CL:0000047!1.31e-14!33;CL:0000031!1.31e-14!33;CL:0000404!1.31e-14!33;CL:0000117!4.46e-12!23;CL:0000337!4.46e-12!23;CL:0000221!1.08e-11!44;CL:0000133!1.08e-11!44;CL:0002319!1.22e-11!43;CL:0000393!3.70e-09!39;CL:0000211!3.70e-09!39;CL:0000055!4.51e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-17,33;CL:0000047,6.34e-17,33;CL:0000031,6.34e-17,33;CL:0000404,6.34e-17,33;CL:0000117,1.10e-13,23;CL:0000337,1.10e-13,23;CL:0000221,6.63e-13,44;CL:0000133,6.63e-13,44;CL:0002319,7.69e-13,43;CL:0000393,5.51e-12,39;CL:0000211,5.51e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.22e-22!73;UBERON:0005743!4.22e-22!73;UBERON:0000073!9.89e-21!75;UBERON:0001016!9.89e-21!75;UBERON:0002346!3.92e-18!71;UBERON:0003075!3.92e-18!71;UBERON:0007284!3.92e-18!71;UBERON:0004121!1.13e-17!102;UBERON:0000924!1.13e-17!102;UBERON:0006601!1.13e-17!102;UBERON:0002020!1.68e-17!34;UBERON:0003056!8.94e-16!49;UBERON:0002791!4.57e-15!29;UBERON:0003528!4.57e-15!29;UBERON:0001893!4.57e-15!29;UBERON:0001049!5.38e-15!52;UBERON:0005068!5.38e-15!52;UBERON:0006241!5.38e-15!52;UBERON:0007135!5.38e-15!52;UBERON:0003080!2.35e-14!40;UBERON:0002780!5.72e-14!39;UBERON:0001890!5.72e-14!39;UBERON:0006240!5.72e-14!39;UBERON:0000033!6.21e-14!63;UBERON:0000955!2.38e-13!50;UBERON:0006238!2.38e-13!50;UBERON:0002616!4.03e-13!49;UBERON:0000956!1.36e-11!21;UBERON:0001869!1.36e-11!21;UBERON:0000203!1.36e-11!21;UBERON:0007811!2.30e-10!86;UBERON:0002619!6.79e-09!17;UBERON:0000153!1.05e-08!94;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-23,73;UBERON:0001016,3.59e-22,75;UBERON:0002020,2.04e-19,34;UBERON:0002346,2.28e-19,64;UBERON:0003075,2.28e-19,64;UBERON:0007284,2.28e-19,64;UBERON:0004121,2.29e-18,95;UBERON:0000924,2.29e-18,95;UBERON:0006601,2.29e-18,95;UBERON:0003528,1.29e-16,29;UBERON:0002791,1.29e-16,29;UBERON:0001893,1.29e-16,29;UBERON:0000073,3.96e-16,54;UBERON:0003056,6.30e-16,49;UBERON:0010371,1.15e-15,73;UBERON:0001049,1.43e-15,52;UBERON:0005068,1.43e-15,52;UBERON:0006241,1.43e-15,52;UBERON:0007135,1.43e-15,52;UBERON:0003080,1.46e-14,40;UBERON:0002780,3.98e-14,39;UBERON:0001890,3.98e-14,39;UBERON:0006240,3.98e-14,39;UBERON:0000955,8.56e-13,47;UBERON:0006238,8.56e-13,47;UBERON:0000956,1.31e-12,21;UBERON:0001869,1.31e-12,21;UBERON:0000203,1.31e-12,21;UBERON:0002616,1.55e-12,46;UBERON:0010314,5.39e-10,92;UBERON:0002619,1.58e-09,17;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10
|phase1_expression=5.60520964866779,0,0,0,0,1.51091344720701,1.63528848416868,0.387369970324729,1.83025338797167,2.34064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,3.14660173558958,1.29078236561151,1.56719873483361,0.799962113967033,0.68822784320151,0,0,0.430942465371778,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.55994568650145,5.75010257459886,0,0,0.336093799142464,0,0,0,8.09265843438391,11.6378015439847,8.23980824558033,0,0,0,0,0.7104801149461,6.5912024314049,13.0634223809329,64.909697305107,65.6128860292017,66.4626877870367,11.7116903605559,11.9269012113871,27.0704666265048,21.8527673921579,38.6071890376209,2.20231761998777,4.97980618532232,5.06901559745603,3.95658863190582,6.03818447775904,10.4182674111352,3.62937898701795,10.6924895906019,6.72312290217964,9.1334861496837,6.97621235915604,3.91438836233131,0.227178579999552,0,1.15945795480671,0,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0,0,0.505524445014783,0.68510327831436,0,1.48442139064825,0.346970653532272,1.21786191324856,2.99800146432876,1.50722640552623,1.17588707135705,0.753999547978053,0,0,0,0.970601099684455,2.87093973998512,3.39412677194655,3.72783522436244,0,0.209446706813455,1.02182822083437,0.599075622529601,0,0.508280908292259,5.39246301857362,9.15001205637253,10.178002521142,19.8159725019195,19.9458056717658,5.40248915854856,8.11206315338788,0,2.23932547098167,0.252722758433675,0.210441855886474,3.12289063110489,9.19608417733892,11.7040384373477,8.28876498096433,8.77670839052129,2.3060469651273,2.06143794031403,0.258703370739016,0.862271971731369,0.189106080167819,0.879755620819744,0.43839146485515,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,38.0747065803352,0.991256348951394,0.264450566663544,0,0.696710015581316,0.644337306610467,0,0.444756087689741,0.760902504450237,1.42358718463353,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,1.00107063429656,1.37591296579242,2.69834534861824,3.85434230638156,6.75296047306767,4.58326533206556,1.43848068725405,1.94562272130042,1.92192989231657,1.43768206527355,1.48856379067401,2.80833905803104,0,0.538192240565737,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.509235257325564,1.17345124144251,1.67506257441816,3.33261097240419,1.95133647857799,3.4679731703362,4.20782910332672,5.42146213435456,1.63863314715738,2.24490476425664,1.15719246865209,0,0,0,0,4.17431533968259,4.57125577709592,0,0,35.3369205746207,30.4542220551378,36.6219776145758,0,1.55959071857676,1.69845918473299,5.66734982344852,9.05993159525067,13.0444966722353,2.89189184779626,0.141940085208269,0.178065603667255,0,0.164970122972535,7.96470830039777,0.971122544619926,1.81394134178851,2.64047111658257,3.54362271456927,2.45948118355142,2.58428293168221,3.99887102425256,7.12994756769443,6.95280867458795,7.37930260024991,9.28219889233682,1.70219802876894,1.8006109403131,0.905510786479282,1.07168517515796,0.709360934569094,1.07021290561242,0.493647061806363,1.2178597964584,0,0.21183207086382,0.441056796109924,0.16488625294148,0.645857706783622,0.965006798850494,0.716234064018819,0.328281799490123,0.582961673259701,5.00648315428376,0,0,0.370389054739423,0,0.136694227721025,0,4.58941760983409,5.45810664062266,5.11339903076368,14.3200592702267,0,0.203319467126849,0.540026704109006,0.209088296014469,0.436725127492355,1.07891477107857,1.23980183588004,8.89970202745701,0.777689839750757,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0.948033361884535,4.86540516696394,6.7789231728786,4.02754551231165,2.8644271306797,1.78813219303138,0.961563596159751,0.590758108698309,0.706765149637033,0.762068066549998,0.201652370273681,0.779663045918019,1.15454209968395,0.701261413089414,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,29.3670958160875,29.9211403729665,33.8008352929244,24.746858257491,22.6077231524312,17.3740596399631,19.5756525067224,15.3109209096235,24.0165476761628,19.6748918465692,1.55681021376265,5.98537310101547,4.09760653809922,4.37592090722929,2.30574478890781,2.75765262675021,2.889207461421,2.47242068686673,3.85103051510178,1.51618327058278,2.78827229879264,3.01802146217722,3.27745276144588,2.81710670581425,2.12511235135769,1.42888107384922,2.31768651889711,3.47236596834669,2.88460130562315,2.06078488188156,1.37147700954166,2.66213709239006,1.90748951957857,2.90692833264657,2.25862512996793,2.5384382367503,2.37806364734604,4.99832451731901,1.49384525230448,0,2.72860541685601,1.97008964751127,1.63692417267876,2.16911577660352,1.92906610981141,8.24374907195222,0.701794825336225,2.79332370262788,1.14772999241306,3.52946270591225,2.31867835620421
|phase1_expression=5.60520964866779,0,0,0,0,1.51091344720701,1.63528848416868,0.387369970324729,1.83025338797167,2.34064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,3.14660173558958,1.29078236561151,1.56719873483361,0.799962113967033,0.68822784320151,0,0,0.430942465371778,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.55994568650145,5.75010257459886,0,0,0.336093799142464,0,0,0,8.09265843438391,11.6378015439847,8.23980824558033,0,0,0,0,0.7104801149461,6.5912024314049,13.0634223809329,64.909697305107,65.6128860292017,66.4626877870367,11.7116903605559,11.9269012113871,27.0704666265048,21.8527673921579,38.6071890376209,2.20231761998777,4.97980618532232,5.06901559745603,3.95658863190582,6.03818447775904,10.4182674111352,3.62937898701795,10.6924895906019,6.72312290217964,9.1334861496837,6.97621235915604,3.91438836233131,0.227178579999552,0,1.15945795480671,0,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0,0,0.505524445014783,0.68510327831436,0,1.48442139064825,0.346970653532272,1.21786191324856,2.99800146432876,1.50722640552623,1.17588707135705,0.753999547978053,0,0,0,0.970601099684455,2.87093973998512,3.39412677194655,3.72783522436244,0,0.209446706813455,1.02182822083437,0.599075622529601,0,0.508280908292259,5.39246301857362,9.15001205637253,10.178002521142,19.8159725019195,19.9458056717658,5.40248915854856,8.11206315338788,0,2.23932547098167,0.252722758433675,0.210441855886474,3.12289063110489,9.19608417733892,11.7040384373477,8.28876498096433,8.77670839052129,2.3060469651273,2.06143794031403,0.258703370739016,0.862271971731369,0.189106080167819,0.879755620819744,0.43839146485515,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,38.0747065803352,0.991256348951394,0.264450566663544,0,0.696710015581316,0.644337306610467,0,0.444756087689741,0.760902504450237,1.42358718463353,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,1.00107063429656,1.37591296579242,2.69834534861824,3.85434230638156,6.75296047306767,4.58326533206556,1.43848068725405,1.94562272130042,1.92192989231657,1.43768206527355,1.48856379067401,2.80833905803104,0,0.538192240565737,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.509235257325564,1.17345124144251,1.67506257441816,3.33261097240419,1.95133647857799,3.4679731703362,4.20782910332672,5.42146213435456,1.63863314715738,2.24490476425664,1.15719246865209,0,0,0,0,4.17431533968259,4.57125577709592,0,0,35.3369205746207,30.4542220551378,36.6219776145758,0,1.55959071857676,1.69845918473299,5.66734982344852,9.05993159525067,13.0444966722353,2.89189184779626,0.141940085208269,0.178065603667255,0,0.164970122972535,7.96470830039777,0.971122544619926,1.81394134178851,2.64047111658257,3.54362271456927,2.45948118355142,2.58428293168221,3.99887102425256,7.12994756769443,6.95280867458795,7.37930260024991,9.28219889233682,1.70219802876894,1.8006109403131,0.905510786479282,1.07168517515796,0.709360934569094,1.07021290561242,0.493647061806363,1.2178597964584,0,0.21183207086382,0.441056796109924,0.16488625294148,0.645857706783622,0.965006798850494,0.716234064018819,0.328281799490123,0.582961673259701,5.00648315428376,0,0,0.370389054739423,0,0.136694227721025,0,4.58941760983409,5.45810664062266,5.11339903076368,14.3200592702267,0,0.203319467126849,0.540026704109006,0.209088296014469,0.436725127492355,1.07891477107857,1.23980183588004,8.89970202745701,0.777689839750757,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0.948033361884535,4.86540516696394,6.7789231728786,4.02754551231165,2.8644271306797,1.78813219303138,0.961563596159751,0.590758108698309,0.706765149637033,0.762068066549998,0.201652370273681,0.779663045918019,1.15454209968395,0.701261413089414,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,29.3670958160875,29.9211403729665,33.8008352929244,24.746858257491,22.6077231524312,17.3740596399631,19.5756525067224,15.3109209096235,24.0165476761628,19.6748918465692,1.55681021376265,5.98537310101547,4.09760653809922,4.37592090722929,2.30574478890781,2.75765262675021,2.889207461421,2.47242068686673,3.85103051510178,1.51618327058278,2.78827229879264,3.01802146217722,3.27745276144588,2.81710670581425,2.12511235135769,1.42888107384922,2.31768651889711,3.47236596834669,2.88460130562315,2.06078488188156,1.37147700954166,2.66213709239006,1.90748951957857,2.90692833264657,2.25862512996793,2.5384382367503,2.37806364734604,4.99832451731901,1.49384525230448,0,2.72860541685601,1.97008964751127,1.63692417267876,2.16911577660352,1.92906610981141,8.2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|short_description=p1@Sstr2
}}
}}

Latest revision as of 22:17, 26 September 2015

Short description:p1@Sstr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sstr2_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 0bp_to_ENSMUST00000146390_5end
EntrezGene:Sstr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sstr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D564.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F565.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D966.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D519.82
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C68.78
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G138.07
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.34e-1733
neuronal stem cell6.34e-1733
neuroblast6.34e-1733
electrically signaling cell6.34e-1733
CNS neuron (sensu Vertebrata)1.10e-1323
neuroblast (sensu Vertebrata)1.10e-1323
ectodermal cell6.63e-1344
neurectodermal cell6.63e-1344
neural cell7.69e-1343
electrically responsive cell5.51e-1239
electrically active cell5.51e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.42e-2373
nervous system3.59e-2275
gray matter2.04e-1934
neurectoderm2.28e-1964
neural plate2.28e-1964
presumptive neural plate2.28e-1964
ectoderm-derived structure2.29e-1895
ectoderm2.29e-1895
presumptive ectoderm2.29e-1895
brain grey matter1.29e-1629
regional part of telencephalon1.29e-1629
telencephalon1.29e-1629
regional part of nervous system3.96e-1654
pre-chordal neural plate6.30e-1649
ecto-epithelium1.15e-1573
neural tube1.43e-1552
neural rod1.43e-1552
future spinal cord1.43e-1552
neural keel1.43e-1552
anterior neural tube1.46e-1440
regional part of forebrain3.98e-1439
forebrain3.98e-1439
future forebrain3.98e-1439
brain8.56e-1347
future brain8.56e-1347
cerebral cortex1.31e-1221
cerebral hemisphere1.31e-1221
pallium1.31e-1221
regional part of brain1.55e-1246
structure with developmental contribution from neural crest5.39e-1092
regional part of cerebral cortex1.58e-0917
occipital lobe1.34e-0810
visual cortex1.34e-0810
neocortex1.34e-0810
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