FFCP PHASE1:Mm9::chr7:133839456..133839523,+: Difference between revisions
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{{FFCP|EntrezGene=66162|HGNC=|MCL_coexpression_id=1226|UniProt=Q8BGS2|association_with_transcript=0bp_to_ENSMUST00000052145,ENSMUST00000106369,NM_175103,uc009jsj.1_5end|description=CAGE_peak_1_at_Bola2_5end|id=chr7:133839456..133839523,+|ontology_enrichment_celltype=CL:0000144!2.21e-33!121;CL:0000012!2.21e-33!121;CL:0000548!1.57e-32!115;CL:0000004!1.57e-32!115;CL:0000255!1.57e-32!115;CL:0002371!2.00e-32!118;CL:0000034!8.14e-30!97;CL:0000723!1.83e-27!91;CL:0000048!1.83e-27!91;CL:0000219!5.37e-25!54;CL:0002320!1.25e-20!46;CL:0000134!1.25e-20!46;CL:0000063!2.90e-19!66;CL:0000988!2.56e-17!32;CL:0002032!2.56e-17!32;CL:0000037!2.56e-17!32;CL:0000566!2.56e-17!32;CL:0000837!2.56e-17!32;CL:0002031!2.01e-13!25;CL:0000049!2.85e-11!19;CL:0000055!1.10e-10!50;CL:0002321!2.57e-10!70;CL:0000220!2.57e-10!70;CL:0000221!1.35e-09!44;CL:0000133!1.35e-09!44;CL:0000738!1.92e-09!17;CL:0002087!1.92e-09!17;CL:0002319!1.97e-09!43;CL:0000763!2.32e-09!16;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23;CL:0000839!2.08e-07!13;CL:0000838!2.49e-07!12;CL:0000542!3.54e-07!13;CL:0000051!3.54e-07!13;CL:0000084!6.65e-07!11;CL:0000827!6.65e-07!11|ontology_enrichment_celltype_v019_2=CL:0000034,8.14e-30,97;CL:0000723,1.83e-27,91;CL:0000048,1.83e-27,91;CL:0000219,5.37e-25,54;CL:0002320,1.25e-20,46;CL:0000134,1.25e-20,46;CL:0000988,2.56e-17,32;CL:0002032,2.56e-17,32;CL:0000037,2.56e-17,32;CL:0000837,2.56e-17,32;CL:0002031,2.01e-13,25;CL:0000049,2.85e-11,19;CL:0002321,2.57e-10,70;CL:0000221,1.35e-09,44;CL:0000133,1.35e-09,44;CL:0000738,1.92e-09,17;CL:0002087,1.92e-09,17;CL:0002319,1.97e-09,43;CL:0000763,2.32e-09,16;CL:0000117,1.29e-07,23;CL:0000337,1.29e-07,23;CL:0000839,2.08e-07,13;CL:0000838,2.49e-07,12;CL:0000542,3.54e-07,13;CL:0000051,3.54e-07,13;CL:0000084,6.65e-07,11;CL:0000827,6.65e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.25e-20!46;UBERON:0002371!1.10e-09!16;UBERON:0000073!1.25e-08!75;UBERON:0001016!1.25e-08!75;UBERON:0002020!1.79e-08!34;UBERON:0001017!7.81e-08!73;UBERON:0005743!7.81e-08!73|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-20,46;UBERON:0002371,1.10e-09,16;UBERON:0001016,1.25e-08,75;UBERON:0002020,1.79e-08,34;UBERON:0001017,7.81e-08,73;UBERON:0000073,2.25e-07,54|phase1_expression=74.3090650566244,30.3608604646244,30.9399482784885,16.9379958331825,22.0394121176393,45.1595241442984,58.4031601488814,83.2845436198167,201.609450121187,206.444912215998,235.082270373618,232.615615630401,128.914149638198,99.222156745562,90.6058552138603,84.2297112341676,72.7544353253273,102.840665906785,93.5120437191138,104.399854342315,37.5891342467728,75.3618319614719,93.7707243008778,60.4771358159077,64.6934172609419,47.6612530215467,53.4144875237253,51.4976246119275,42.3752225387714,53.1783573793454,84.9227855809817,149.867238936473,139.004641994113,174.329849116983,97.6318474759308,128.333146216756,107.597250750269,33.4825304589526,92.1975706538085,46.593613213668,21.7645650571475,27.3218193983378,29.6161315349004,53.2543540036692,50.4857117473182,70.1148593257624,194.815444742662,143.460552898334,70.299578475031,116.65793944457,105.969721170399,116.439577135627,107.213085270894,143.621704118246,152.922678609821,85.4101327639344,70.7737596648729,69.6157324574547,57.4578748841258,71.4137822017244,80.4965882452848,134.860123763515,148.51223095056,253.321770414714,312.481770571164,319.005571610799,190.845270400224,140.239681442367,60.2436647512255,107.869744727021,66.8833377097395,138.826378420249,155.491452829936,60.5104548121873,75.0470038072791,82.7296907949019,93.5984988494804,76.7400901891978,86.4804782232651,52.6226288043473,69.2561462070241,66.1559980607085,145.175159480718,136.751314237698,92.4429399049701,98.9952047191523,76.4535925891183,65.9854038221564,180.304066326311,107.991759392597,41.1607573956382,74.8568772973806,66.6371907033596,83.1142915122238,46.1341256387845,32.2579358710082,34.2684385121475,58.4576006442738,122.099422163348,110.948626396247,65.6330336159331,53.8971205140135,50.9610479413291,42.6640021891999,142.234613944368,136.560967491078,128.403209033755,33.6842445171227,44.2783781036664,34.2901341239745,53.0865099904376,57.2395099226825,43.1250979868829,54.8630411611546,30.9258299766904,28.1493164578473,20.517182321953,14.8937337627509,30.0767587662957,30.2504009401655,22.9675179198809,35.3958934788712,29.8226817948995,25.1791485429931,18.431310199584,27.8448190177365,167.621359183782,332.346112970348,172.307227911076,40.8928445575166,54.9000723382352,56.4188040986761,41.0225395653772,42.1930504595045,55.271619852843,45.4275536589721,35.2364198922094,27.2451265636104,66.9715309849238,18.0979996062368,61.6770899643216,69.2005334344753,48.4367129176389,54.7058488743646,29.7999866282816,28.8255870640912,34.1074277397413,23.0245999957724,52.5985902756135,29.5005485061798,33.9585669636421,44.2775379503701,44.4875598760957,23.3328951569852,39.0986059175093,55.9286289759966,282.991914487234,272.788781541598,183.853784108948,35.4185071035708,60.507723475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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66162 | |||
|HGNC= | |||
|MCL_coexpression_id=1226 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGS2 | |||
|association_with_transcript=0bp_to_ENSMUST00000052145,ENSMUST00000106369,NM_175103,uc009jsj.1_5end | |||
|cluster_id=chr7:133839456..133839523,+ | |||
|description=CAGE_peak_1_at_Bola2_5end | |||
|id=chr7:133839456..133839523,+ | |||
|ontology_enrichment_celltype=CL:0000144!2.21e-33!121;CL:0000012!2.21e-33!121;CL:0000548!1.57e-32!115;CL:0000004!1.57e-32!115;CL:0000255!1.57e-32!115;CL:0002371!2.00e-32!118;CL:0000034!8.14e-30!97;CL:0000723!1.83e-27!91;CL:0000048!1.83e-27!91;CL:0000219!5.37e-25!54;CL:0002320!1.25e-20!46;CL:0000134!1.25e-20!46;CL:0000063!2.90e-19!66;CL:0000988!2.56e-17!32;CL:0002032!2.56e-17!32;CL:0000037!2.56e-17!32;CL:0000566!2.56e-17!32;CL:0000837!2.56e-17!32;CL:0002031!2.01e-13!25;CL:0000049!2.85e-11!19;CL:0000055!1.10e-10!50;CL:0002321!2.57e-10!70;CL:0000220!2.57e-10!70;CL:0000221!1.35e-09!44;CL:0000133!1.35e-09!44;CL:0000738!1.92e-09!17;CL:0002087!1.92e-09!17;CL:0002319!1.97e-09!43;CL:0000763!2.32e-09!16;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23;CL:0000839!2.08e-07!13;CL:0000838!2.49e-07!12;CL:0000542!3.54e-07!13;CL:0000051!3.54e-07!13;CL:0000084!6.65e-07!11;CL:0000827!6.65e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,8.14e-30,97;CL:0000723,1.83e-27,91;CL:0000048,1.83e-27,91;CL:0000219,5.37e-25,54;CL:0002320,1.25e-20,46;CL:0000134,1.25e-20,46;CL:0000988,2.56e-17,32;CL:0002032,2.56e-17,32;CL:0000037,2.56e-17,32;CL:0000837,2.56e-17,32;CL:0002031,2.01e-13,25;CL:0000049,2.85e-11,19;CL:0002321,2.57e-10,70;CL:0000221,1.35e-09,44;CL:0000133,1.35e-09,44;CL:0000738,1.92e-09,17;CL:0002087,1.92e-09,17;CL:0002319,1.97e-09,43;CL:0000763,2.32e-09,16;CL:0000117,1.29e-07,23;CL:0000337,1.29e-07,23;CL:0000839,2.08e-07,13;CL:0000838,2.49e-07,12;CL:0000542,3.54e-07,13;CL:0000051,3.54e-07,13;CL:0000084,6.65e-07,11;CL:0000827,6.65e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.25e-20!46;UBERON:0002371!1.10e-09!16;UBERON:0000073!1.25e-08!75;UBERON:0001016!1.25e-08!75;UBERON:0002020!1.79e-08!34;UBERON:0001017!7.81e-08!73;UBERON:0005743!7.81e-08!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-20,46;UBERON:0002371,1.10e-09,16;UBERON:0001016,1.25e-08,75;UBERON:0002020,1.79e-08,34;UBERON:0001017,7.81e-08,73;UBERON:0000073,2.25e-07,54 | |||
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| |||
|short_description=p1@Bola2 | |||
}} |
Latest revision as of 21:24, 25 September 2015
Short description: | p1@Bola2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bola2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1226 |
Association with transcript: | 0bp_to_ENSMUST00000052145, ENSMUST00000106369, NM_175103, uc009jsj.1_5end |
EntrezGene: | Bola2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 8.14e-30 | 97 |
somatic stem cell | 1.83e-27 | 91 |
multi fate stem cell | 1.83e-27 | 91 |
motile cell | 5.37e-25 | 54 |
connective tissue cell | 1.25e-20 | 46 |
mesenchymal cell | 1.25e-20 | 46 |
hematopoietic cell | 2.56e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.56e-17 | 32 |
hematopoietic stem cell | 2.56e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.56e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 2.01e-13 | 25 |
common myeloid progenitor | 2.85e-11 | 19 |
embryonic cell | 2.57e-10 | 70 |
ectodermal cell | 1.35e-09 | 44 |
neurectodermal cell | 1.35e-09 | 44 |
leukocyte | 1.92e-09 | 17 |
nongranular leukocyte | 1.92e-09 | 17 |
neural cell | 1.97e-09 | 43 |
myeloid cell | 2.32e-09 | 16 |
CNS neuron (sensu Vertebrata) | 1.29e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-07 | 23 |
myeloid lineage restricted progenitor cell | 2.08e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.49e-07 | 12 |
lymphocyte | 3.54e-07 | 13 |
common lymphoid progenitor | 3.54e-07 | 13 |
T cell | 6.65e-07 | 11 |
pro-T cell | 6.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-20 | 46 |
bone marrow | 1.10e-09 | 16 |
nervous system | 1.25e-08 | 75 |
gray matter | 1.79e-08 | 34 |
central nervous system | 7.81e-08 | 73 |
regional part of nervous system | 2.25e-07 | 54 |