FFCP PHASE1:Mm9::chr7:126138580..126138593,-: Difference between revisions
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{{FFCP|EntrezGene=64297|HGNC=|MCL_coexpression_id=1475|UniProt=Q923Z0,D2DFA9|association_with_transcript=131bp_to_ENSMUST00000008878,NM_001195774,NM_022420,uc009jkx.2,uc012fst.1_5end|description=CAGE_peak_3_at_Gprc5b_5end|id=chr7:126138580..126138593,-|ontology_enrichment_celltype=CL:0000055!5.47e-12!50;CL:0000221!1.09e-11!44;CL:0000133!1.09e-11!44;CL:0002319!2.37e-11!43;CL:0000393!1.97e-08!39;CL:0000211!1.97e-08!39;CL:0000540!3.43e-07!33;CL:0000047!3.43e-07!33;CL:0000031!3.43e-07!33;CL:0000404!3.43e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,3.97e-09,43;CL:0000221,8.64e-09,44;CL:0000133,8.64e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.00e-30!102;UBERON:0000924!5.00e-30!102;UBERON:0006601!5.00e-30!102;UBERON:0000073!3.94e-22!75;UBERON:0001016!3.94e-22!75;UBERON:0001017!2.40e-21!73;UBERON:0005743!2.40e-21!73;UBERON:0002346!4.30e-20!71;UBERON:0003075!4.30e-20!71;UBERON:0007284!4.30e-20!71;UBERON:0000033!5.18e-16!63;UBERON:0000955!2.83e-13!50;UBERON:0006238!2.83e-13!50;UBERON:0001049!3.65e-13!52;UBERON:0005068!3.65e-13!52;UBERON:0006241!3.65e-13!52;UBERON:0007135!3.65e-13!52;UBERON:0002616!1.27e-12!49;UBERON:0003056!7.99e-10!49;UBERON:0002020!1.00e-08!34;UBERON:0000153!4.77e-08!94;UBERON:0003080!1.11e-07!40;UBERON:0007811!2.02e-07!86;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0002791!3.26e-07!29;UBERON:0003528!3.26e-07!29;UBERON:0001893!3.26e-07!29;UBERON:0002780!3.85e-07!39;UBERON:0001890!3.85e-07!39;UBERON:0006240!3.85e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.48e-23,75;UBERON:0001017,1.73e-22,73;UBERON:0004121,5.34e-22,95;UBERON:0000924,5.34e-22,95;UBERON:0006601,5.34e-22,95;UBERON:0010314,4.26e-16,92;UBERON:0002346,4.95e-16,64;UBERON:0003075,4.95e-16,64;UBERON:0007284,4.95e-16,64;UBERON:0000073,9.76e-16,54;UBERON:0010371,5.51e-15,73;UBERON:0001049,7.08e-14,52;UBERON:0005068,7.08e-14,52;UBERON:0006241,7.08e-14,52;UBERON:0007135,7.08e-14,52;UBERON:0000955,2.61e-12,47;UBERON:0006238,2.61e-12,47;UBERON:0002616,2.62e-11,46;UBERON:0003076,5.10e-11,12;UBERON:0003057,5.10e-11,12;UBERON:0004733,2.49e-09,6;UBERON:0004732,2.49e-09,6;UBERON:0002028,2.49e-09,6;UBERON:0007277,2.49e-09,6;UBERON:0003056,2.52e-07,49;UBERON:0002950,3.76e-07,4;UBERON:0001891,3.76e-07,4;UBERON:0009616,3.76e-07,4;UBERON:0010286,3.76e-07,4;UBERON:0002020,6.22e-07,34|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.65192076945513,2.34717403304412,4.57852828398938,0.878744730937887,0.972149495371417,2.09979632438044,1.43752564364972,0,0,0,5.14518872071894,0.573066879877513,1.54701627683233,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,2.99600110518405,4.61061966385865,0.725827286159344,0.540023753326763,0.210324961351382,3.42781181284564,0.883474163806454,0.734944795289724,0.479227355091182,0,3.30347642998166,5.10749352340751,6.60508093001847,0.263772575460388,0.274462930807229,0,8.37548997004143,6.75315132038016,5.04234217663473,1.17851434189467,2.13557521198654,0.372798891650601,1.28734528666413,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,1.03575153458869,3.71105347662062,1.04091196059682,0.913396434936424,1.15307748628029,1.05505848386836,1.29347577849275,1.75933227861546,0.494389935468748,1.3013942122792,0,0.485300549842228,0.662524555381181,0,0,5.5628351432194,3.35114730901528,0.255457055208591,0,0,0,9.43681028250383,6.8625090422794,0.753926112677186,3.30266208365325,2.30143911597297,9.3504620051802,4.86723789203273,0.81471491080253,0.373220911830279,0.252722758433675,1.05220927943237,0.390361328888111,0.459804208866946,1.26043490863744,1.35634336052144,0.884474488967262,0.768682321709099,0.655912071918102,3.10444044886819,0.215567992932842,0.378212160335639,0.879755620819744,1.31517439456545,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.983821158737019,0.925602677324269,0.697601834251224,1.3413670069981,0.700592054203017,0.822799249567402,0.820837320395476,0.405344047729279,0,0.219550115291051,0.671032093801859,5.88811855979556,0.308713837137853,0,0,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0,0.658795818896044,0.251335208800269,0,0,0,0.216138049874694,0,0,0.571242563048644,1.1270773567308,0,0,0.210407459670956,0.126473074248515,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.651859905768103,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.664394068946325,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,1.47529281905711,1.93155722413313,10.4357883492065,7.97039468826982,0.327869890753351,1.00988370881749,1.57754109708128,0.780877488593277,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64297 | |||
|HGNC= | |||
|MCL_coexpression_id=1475 | |||
|TSSclassifier=NA | |||
|UniProt=Q923Z0,D2DFA9 | |||
|association_with_transcript=131bp_to_ENSMUST00000008878,NM_001195774,NM_022420,uc009jkx.2,uc012fst.1_5end | |||
|cluster_id=chr7:126138580..126138593,- | |||
|description=CAGE_peak_3_at_Gprc5b_5end | |||
|id=chr7:126138580..126138593,- | |||
|ontology_enrichment_celltype=CL:0000055!5.47e-12!50;CL:0000221!1.09e-11!44;CL:0000133!1.09e-11!44;CL:0002319!2.37e-11!43;CL:0000393!1.97e-08!39;CL:0000211!1.97e-08!39;CL:0000540!3.43e-07!33;CL:0000047!3.43e-07!33;CL:0000031!3.43e-07!33;CL:0000404!3.43e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.97e-09,43;CL:0000221,8.64e-09,44;CL:0000133,8.64e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.00e-30!102;UBERON:0000924!5.00e-30!102;UBERON:0006601!5.00e-30!102;UBERON:0000073!3.94e-22!75;UBERON:0001016!3.94e-22!75;UBERON:0001017!2.40e-21!73;UBERON:0005743!2.40e-21!73;UBERON:0002346!4.30e-20!71;UBERON:0003075!4.30e-20!71;UBERON:0007284!4.30e-20!71;UBERON:0000033!5.18e-16!63;UBERON:0000955!2.83e-13!50;UBERON:0006238!2.83e-13!50;UBERON:0001049!3.65e-13!52;UBERON:0005068!3.65e-13!52;UBERON:0006241!3.65e-13!52;UBERON:0007135!3.65e-13!52;UBERON:0002616!1.27e-12!49;UBERON:0003056!7.99e-10!49;UBERON:0002020!1.00e-08!34;UBERON:0000153!4.77e-08!94;UBERON:0003080!1.11e-07!40;UBERON:0007811!2.02e-07!86;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0002791!3.26e-07!29;UBERON:0003528!3.26e-07!29;UBERON:0001893!3.26e-07!29;UBERON:0002780!3.85e-07!39;UBERON:0001890!3.85e-07!39;UBERON:0006240!3.85e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.48e-23,75;UBERON:0001017,1.73e-22,73;UBERON:0004121,5.34e-22,95;UBERON:0000924,5.34e-22,95;UBERON:0006601,5.34e-22,95;UBERON:0010314,4.26e-16,92;UBERON:0002346,4.95e-16,64;UBERON:0003075,4.95e-16,64;UBERON:0007284,4.95e-16,64;UBERON:0000073,9.76e-16,54;UBERON:0010371,5.51e-15,73;UBERON:0001049,7.08e-14,52;UBERON:0005068,7.08e-14,52;UBERON:0006241,7.08e-14,52;UBERON:0007135,7.08e-14,52;UBERON:0000955,2.61e-12,47;UBERON:0006238,2.61e-12,47;UBERON:0002616,2.62e-11,46;UBERON:0003076,5.10e-11,12;UBERON:0003057,5.10e-11,12;UBERON:0004733,2.49e-09,6;UBERON:0004732,2.49e-09,6;UBERON:0002028,2.49e-09,6;UBERON:0007277,2.49e-09,6;UBERON:0003056,2.52e-07,49;UBERON:0002950,3.76e-07,4;UBERON:0001891,3.76e-07,4;UBERON:0009616,3.76e-07,4;UBERON:0010286,3.76e-07,4;UBERON:0002020,6.22e-07,34 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.65192076945513,2.34717403304412,4.57852828398938,0.878744730937887,0.972149495371417,2.09979632438044,1.43752564364972,0,0,0,5.14518872071894,0.573066879877513,1.54701627683233,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,2.99600110518405,4.61061966385865,0.725827286159344,0.540023753326763,0.210324961351382,3.42781181284564,0.883474163806454,0.734944795289724,0.479227355091182,0,3.30347642998166,5.10749352340751,6.60508093001847,0.263772575460388,0.274462930807229,0,8.37548997004143,6.75315132038016,5.04234217663473,1.17851434189467,2.13557521198654,0.372798891650601,1.28734528666413,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,1.03575153458869,3.71105347662062,1.04091196059682,0.913396434936424,1.15307748628029,1.05505848386836,1.29347577849275,1.75933227861546,0.494389935468748,1.3013942122792,0,0.485300549842228,0.662524555381181,0,0,5.5628351432194,3.35114730901528,0.255457055208591,0,0,0,9.43681028250383,6.8625090422794,0.753926112677186,3.30266208365325,2.30143911597297,9.3504620051802,4.86723789203273,0.81471491080253,0.373220911830279,0.252722758433675,1.05220927943237,0.390361328888111,0.459804208866946,1.26043490863744,1.35634336052144,0.884474488967262,0.768682321709099,0.655912071918102,3.10444044886819,0.215567992932842,0.378212160335639,0.879755620819744,1.31517439456545,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.983821158737019,0.925602677324269,0.697601834251224,1.3413670069981,0.700592054203017,0.822799249567402,0.820837320395476,0.405344047729279,0,0.219550115291051,0.671032093801859,5.88811855979556,0.308713837137853,0,0,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0,0.658795818896044,0.251335208800269,0,0,0,0.216138049874694,0,0,0.571242563048644,1.1270773567308,0,0,0.210407459670956,0.126473074248515,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.651859905768103,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.664394068946325,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,1.47529281905711,1.93155722413313,10.4357883492065,7.97039468826982,0.327869890753351,1.00988370881749,1.57754109708128,0.780877488593277,2.80050417052639,2.38968797952552,0.891194696329576,1.69845918473299,0.809621403349789,1.46127928955656,0.790575555893047,11.5675673911851,0.851640511249612,0.890328018336276,1.30309567482861,0.494910368917606,1.32745138339963,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,1.15184314421485,0,0,0,0,0.32977250588296,0.645857706783622,0.422190474497091,0.477489376012546,0,0,13.1651964427462,0,0,0,0,0,0,0,0,0.138199973804424,0,0.632671987162271,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.0826534557253359,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.66183396182839,0.583353565032143,0.516639293910924,0.506868376472335,1.17357238645754,0.5208175393758,1.46803082195995,0,1.15212002503146,0,0.608175645870493,0.308132871494482,0,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.214368379079066,0,2.25900737046827,1.38097570952153,0.572895513439397,0.859265911718438,2.74033007908257,0.755393897389701,1.35004500046361,1.80128481289688,2.26571204492102,4.65984280576638,0,0,0.341467211508268,0.972426868273176,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.384150914429216,0.287177344778066,0,0.463537303779422,0.578727661391115,0.824171801606613,0,0,0.354951612318675,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.711810108745045,0.985044823755635,0.409231043169689,0.464810523557898,0.771626443924566,0.499621155875892,0.467863216890817,0.859484216193193,0.956441660344217,1.54413993383661,0.695603506861264 | |||
|short_description=p3@Gprc5b | |||
}} |
Latest revision as of 19:10, 25 September 2015
Short description: | p3@Gprc5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gprc5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1475 |
Association with transcript: | 131bp_to_ENSMUST00000008878, NM_001195774, NM_022420, uc009jkx.2, uc012fst.1_5end |
EntrezGene: | Gprc5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.97e-09 | 43 |
ectodermal cell | 8.64e-09 | 44 |
neurectodermal cell | 8.64e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.48e-23 | 75 |
central nervous system | 1.73e-22 | 73 |
ectoderm-derived structure | 5.34e-22 | 95 |
ectoderm | 5.34e-22 | 95 |
presumptive ectoderm | 5.34e-22 | 95 |
structure with developmental contribution from neural crest | 4.26e-16 | 92 |
neurectoderm | 4.95e-16 | 64 |
neural plate | 4.95e-16 | 64 |
presumptive neural plate | 4.95e-16 | 64 |
regional part of nervous system | 9.76e-16 | 54 |
ecto-epithelium | 5.51e-15 | 73 |
neural tube | 7.08e-14 | 52 |
neural rod | 7.08e-14 | 52 |
future spinal cord | 7.08e-14 | 52 |
neural keel | 7.08e-14 | 52 |
brain | 2.61e-12 | 47 |
future brain | 2.61e-12 | 47 |
regional part of brain | 2.62e-11 | 46 |
posterior neural tube | 5.10e-11 | 12 |
chordal neural plate | 5.10e-11 | 12 |
segmental subdivision of hindbrain | 2.49e-09 | 6 |
segmental subdivision of nervous system | 2.49e-09 | 6 |
hindbrain | 2.49e-09 | 6 |
presumptive hindbrain | 2.49e-09 | 6 |
pre-chordal neural plate | 2.52e-07 | 49 |
regional part of midbrain | 3.76e-07 | 4 |
midbrain | 3.76e-07 | 4 |
presumptive midbrain | 3.76e-07 | 4 |
midbrain neural tube | 3.76e-07 | 4 |
gray matter | 6.22e-07 | 34 |