FFCP PHASE1:Hg19::chrX:20284733..20284761,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6197 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10432 | |||
|TSSclassifier=strong | |||
|UniProt=B1AXG2,P51812 | |||
|association_with_transcript=0bp_to_ENST00000438357,NM_004586,uc004czu.2,uc004czv.2_5end | |||
|cluster_id=chrX:20284733..20284761,- | |||
|description=CAGE_peak_5_at_RPS6KA3_5end | |||
|id=chrX:20284733..20284761,- | |||
|ontology_enrichment_celltype=CL:0000738!2.85e-12!140;CL:0000037!3.40e-11!172;CL:0000566!3.40e-11!172;CL:0000766!3.98e-11!76;CL:0000860!9.43e-11!45;CL:0000988!2.65e-10!182;CL:0002032!6.46e-10!165;CL:0000837!6.46e-10!165;CL:0000839!8.20e-10!70;CL:0000557!9.46e-10!71;CL:0000763!9.99e-10!112;CL:0000049!9.99e-10!112;CL:0002057!1.33e-09!42;CL:0002031!1.81e-09!124;CL:0002087!7.11e-09!119;CL:0002194!8.74e-09!63;CL:0000576!8.74e-09!63;CL:0000040!8.74e-09!63;CL:0000559!8.74e-09!63;CL:0002009!1.15e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-11;33!CL:0002057;1.53e-11;33!CL:0000473;2.60e-09;39!CL:0000234;2.60e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.93e-14,136;CL:0000766,6.83e-13,72;CL:0000988,2.13e-12,177;CL:0000037,6.43e-12,168;CL:0000557,2.20e-11,67;CL:0000763,6.17e-11,108;CL:0000049,6.17e-11,108;CL:0000839,9.96e-11,66;CL:0002032,1.99e-10,161;CL:0000837,1.99e-10,161;CL:0002031,1.02e-09,120;CL:0002009,1.47e-09,61;CL:0000860,1.70e-09,42;CL:0002057,1.70e-09,42;CL:0000473,1.93e-09,48;CL:0000234,1.93e-09,48;CL:0002194,3.27e-09,59;CL:0000576,3.27e-09,59;CL:0000040,3.27e-09,59;CL:0000559,3.27e-09,59;CL:0002087,7.58e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.08e-12!102;UBERON:0003061!5.08e-12!102;UBERON:0002193!1.01e-09!112;UBERON:0002371!7.21e-09!80;UBERON:0001474!1.59e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.40e-13,98;UBERON:0003061,2.40e-13,98;UBERON:0002193,8.26e-12,108;UBERON:0002371,9.21e-11,76;UBERON:0001474,2.72e-09,82;UBERON:0002405,7.51e-08,93;UBERON:0004765,1.12e-07,90 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.845726424575827,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,1.09499540058307,0.376627918784408,0.229240217243854,0.410502947249729,0.314843125254717,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0.232401601740905,0.284338464974843,0.293600439334847,0,1.40381113229099,0.434021741431704,0.223915474239924,0,1.03030227053675,0.726991193897824,2.26725566213286,0.727752183563449,0.697287110717054,0.822335776043652,0.929119112685311,2.01384674625505,1.2808035326455,0.945928919554341,1.37898272294647,1.29096936716765,2.70852973188684,1.12945403725563,1.09162460023138,0.224723484445085,1.22433556948361,1.60464513538047,1.27867425159808,0.989553900560148,1.19678194572979,0.426224750532694,3.19230162491442,2.8369261234557,4.35975574296902,1.50749199154046,2.60741459210101,1.3031330682307,3.02699751316684,1.10483290796269,1.58231193720442,0,0.425208599930087,0.628975936525128,0.561643155732475,0.450530678524519,0.64290234678832,0,0.79566670879636,0.547992461293902,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,1.17903228824749,2.2616164889946,0.668745981562712,0.32592226663359,0,0,1.78256731016278,0.294605907474837,0.664601683750863,0.541607727530031,0.768547918354051,1.43065282315866,2.63100647365882,1.93445012450094,2.31842468588042,0.444859689486181,0.802622484269139,0,1.35971211237079,0.766440987203842,0.34362744548263,2.02415753615602,0.95569624297229,0.651083453856419,0,1.05402583354441,1.02389288923535,0,1.18388626022008,1.64225599384209,1.20964045934839,0.802320587350522,1.44824403882799,2.43806866313962,0,0.12786256184353,0,0,1.15877215168659,0.795285947051099,2.43317435151318,0.567208902984407,1.55210578223795,0.351339142772504,0.458426764241994,0,0.741568885568859,0.97364218096405,1.21890816109487,1.46253756570752,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0.56530794192401,0,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0.549605231791222,0,0,0,0.993943903390637,0.25326102332916,0.794455084879313,0.860509862246441,0.709336764396714,0.560677600142307,0,0.74000264525148,1.24484414159907,1.21239604862719,1.30769522490767,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,1.04614076386261,0.587172493218824,0.161872944368132,0.140450806702248,0,0.737005903870608,0.619954687054593,0,0.741800787835671,0,0,0.168336113954066,0.875829639103749,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0.567160915800105,0.358779271377724,0.640672166455702,0.635795703478686,0,0.92747276314595,0.257640540045629,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.460249493211497,0.646584227275248,0.710019185033229,0.302256294682921,0,0,0.272746120590835,1.43402297694502,0.365921118388786,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0.591534000199219,0.337169380156203,1.20505514941741,0.772057809126758,0.653638332277218,1.18635309555548,0.404493924480493,0.98110732562673,0.769494313892781,0,0,0,0,0,1.96565443335525,0,1.32438929824395,0.737930631258681,0.343135620597051,0.109750285408626,0,0.502644862058154,0.555530670951178,0,0,0,0.115930404975077,0.469634776943287,0,0,0.380508304469197,0.790204397959275,0,0.246217006087397,0.936017060556951,1.93220510975347,0,0.335964256397719,0.708875486211932,0.358234090811393,0.290633938513962,0,7.8826118063351,0.792435906119034,1.03664057770386,1.29707958075265,1.2624243342638,0.190493682876507,1.14596527667483,0,0,0.616964956219941,0.600686115687835,0.571652865261156,0,0,0.1466765716419,0.387815147273333,3.57656445851882,0,0.531876233169741,0,0.257207374262142,0,0,1.14382394926518,0,0,0.977208552881205,0.710783897485092,0.791951872933429,1.50719688529793,0,1.69954085009497,1.2162378064119,0,0,0.479249710983165,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.336255431980582,0.591092280605782,3.01878604803324,1.15508732651774,0.76228387266739,0,0,0,0,1.49801404789436,8.97484377612075,2.48649308061621,0.36807447515742,0,0,0.207970861530807,0.713715955188647,0.315404830067869,0.585707074963566,0.601892199455438,0,0,0,0.368738337083406,0.521301686808497,0,0,0.413536052245775,2.80428461064202,2.34800627167578,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0.280660094433074,0.896974044789907,1.02341449813341,0.482561763430822,0,0.616838775210622,0.532685175939381,0.246381468041427,1.03850885836724,0.232420756919918,1.0877350463246,0.40101294060657,2.02578175658972,0.459257792658427,0.546273504020151,1.44236856455367,0.451199612907412,0.231046011313244,0,0,0,0,0.170093705276516,1.29549549661284,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0.512900250232778,0.328014645699706,0,0.20608202329544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| |||
|short_description=p5@RPS6KA3 | |||
}} |
Latest revision as of 16:27, 24 September 2015
Short description: | p5@RPS6KA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RPS6KA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438357, NM_004586, uc004czu.2, uc004czv.2_5end |
EntrezGene: | RPS6KA3 |
HGNC: | 10432 |
UniProt: | B1AXG2P51812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.93e-14 | 136 |
myeloid leukocyte | 6.83e-13 | 72 |
hematopoietic cell | 2.13e-12 | 177 |
hematopoietic stem cell | 6.43e-12 | 168 |
granulocyte monocyte progenitor cell | 2.20e-11 | 67 |
myeloid cell | 6.17e-11 | 108 |
common myeloid progenitor | 6.17e-11 | 108 |
myeloid lineage restricted progenitor cell | 9.96e-11 | 66 |
hematopoietic oligopotent progenitor cell | 1.99e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.02e-09 | 120 |
macrophage dendritic cell progenitor | 1.47e-09 | 61 |
classical monocyte | 1.70e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-09 | 42 |
defensive cell | 1.93e-09 | 48 |
phagocyte | 1.93e-09 | 48 |
monopoietic cell | 3.27e-09 | 59 |
monocyte | 3.27e-09 | 59 |
monoblast | 3.27e-09 | 59 |
promonocyte | 3.27e-09 | 59 |
nongranular leukocyte | 7.58e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.40e-13 | 98 |
blood island | 2.40e-13 | 98 |
hemolymphoid system | 8.26e-12 | 108 |
bone marrow | 9.21e-11 | 76 |
bone element | 2.72e-09 | 82 |
immune system | 7.51e-08 | 93 |
skeletal element | 1.12e-07 | 90 |