FFCP PHASE1:Mm9::chr7:118219731..118219745,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=234|UniProt=|association_with_transcript=0bp_to_ENSMUST00000158323_5end|description=CAGE_peak_1_at_ENSMUST00000158323_5end|id=chr7:118219731..118219745,-|ontology_enrichment_celltype=CL:0000034!1.77e-27!97;CL:0000723!3.71e-27!91;CL:0000048!3.71e-27!91;CL:0000548!1.69e-23!115;CL:0000004!1.69e-23!115;CL:0000255!1.69e-23!115;CL:0000144!1.36e-22!121;CL:0000012!1.36e-22!121;CL:0002371!1.81e-21!118;CL:0000055!3.56e-18!50;CL:0000393!7.41e-18!39;CL:0000211!7.41e-18!39;CL:0002321!9.93e-18!70;CL:0000220!9.93e-18!70;CL:0000540!3.61e-16!33;CL:0000047!3.61e-16!33;CL:0000031!3.61e-16!33;CL:0000404!3.61e-16!33;CL:0002319!4.56e-16!43;CL:0000221!6.50e-15!44;CL:0000133!6.50e-15!44;CL:0000117!3.59e-13!23;CL:0000337!3.59e-13!23;CL:0002320!9.71e-11!46;CL:0000134!9.71e-11!46;CL:0000219!1.62e-10!54;CL:0002031!9.13e-09!25;CL:0000063!7.46e-07!66;CL:0000738!7.90e-07!17;CL:0002087!7.90e-07!17|ontology_enrichment_celltype_v019_2=CL:0000034,1.73e-27,97;CL:0000723,3.63e-27,91;CL:0000048,3.63e-27,91;CL:0000393,7.40e-18,39;CL:0000211,7.40e-18,39;CL:0002321,9.73e-18,70;CL:0000540,3.61e-16,33;CL:0000047,3.61e-16,33;CL:0000031,3.61e-16,33;CL:0000404,3.61e-16,33;CL:0002319,4.56e-16,43;CL:0000221,6.50e-15,44;CL:0000133,6.50e-15,44;CL:0000117,3.59e-13,23;CL:0000337,3.59e-13,23;CL:0002320,9.54e-11,46;CL:0000134,9.54e-11,46;CL:0000219,1.59e-10,54;CL:0002031,9.13e-09,25;CL:0000738,7.90e-07,17;CL:0002087,7.90e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.88e-12!73;UBERON:0005743!7.88e-12!73;UBERON:0000073!1.88e-11!75;UBERON:0001016!1.88e-11!75;UBERON:0002020!2.08e-11!34;UBERON:0002384!9.71e-11!46;UBERON:0002791!1.22e-08!29;UBERON:0003528!1.22e-08!29;UBERON:0001893!1.22e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.88e-12,73;UBERON:0001016,1.88e-11,75;UBERON:0002020,2.08e-11,34;UBERON:0002384,9.54e-11,46;UBERON:0003528,1.22e-08,29;UBERON:0002791,1.22e-08,29;UBERON:0001893,1.22e-08,29;UBERON:0000073,1.94e-07,54|phase1_expression=3.52327463630547,5.23463111459042,10.0099832665698,13.6108895088074,29.0519523368881,4.8684988854448,10.7461814673942,70.7595812459838,109.252048389693,95.9664557920173,39.8937865965427,40.3647124516402,73.2739124105561,92.7530469665562,108.26067259009,14.9831697868471,46.1710839564577,67.3511723039837,56.3540322119586,28.8584963222661,17.6890043514225,14.8936426801328,6.79119451761232,8.79958325363737,10.0940083669555,4.59385571292016,2.15380998079537,2.37018355954478,13.8717096203153,7.56090389279792,8.86922042621219,22.2260735710871,5.53558308826113,15.8481681015439,18.4865036640816,14.6286487915473,13.8835162258411,4.60384793810598,3.906676722619,2.61761871986899,5.29408339227913,8.19654581950135,2.91306211818692,17.3737608806297,22.2015479370737,29.9181206023541,27.3836970521814,7.19483016055474,28.3395175727469,15.3599620268684,6.29938897314131,18.6878333674463,19.9661301208706,50.0499877987828,88.0565753753256,23.9251275513431,34.3840127926508,74.7724533802291,80.5219514221199,104.21122291659,93.1732163154083,14.5703148789727,30.2360230677787,317.664600200334,512.232775809693,233.747957817267,121.338044759954,107.196907184714,89.0693769729823,58.7275831742854,80.5544601975793,124.543829200058,125.453331260516,101.177400151552,19.3607851456837,125.013754978963,134.341374819254,112.747919529221,102.609164215171,93.5073780007074,28.0867065859398,123.977382192509,171.418361386848,209.347690931785,104.361203231561,114.610519749257,120.58881363684,155.270738372475,7.1182621733193,8.16172849153284,52.175607966302,22.371020801516,232.550196128051,422.047895860773,369.073005110276,189.067346355076,12.3591089715942,3.06774580640504,18.4448063268037,33.5672595784823,1.97180787687353,6.41632387071589,0,0,34.2055844797718,29.8964641260616,46.0027244963453,20.6672822291499,1.29468941823586,17.6646145487141,9.02123699183906,8.8294988710521,11.3001593655469,8.59119051149949,7.4080885495494,5.90632979249475,7.16865406429684,0.86759614151947,2.65383165584962,5.17653919831709,9.27534377533653,9.21262980956922,5.59175283654366,4.39171195517321,4.1889341362691,6.89734049063197,19.4100501699591,0,13.5965142968179,5.39246301857362,3.20250421973039,14.0732874366408,4.86708096538374,5.11430914660661,3.32460871295296,5.19172041816825,12.1188842981876,5.84712761867437,20.975988949995,11.3638602178696,6.8963834770233,5.51765050640335,3.60124259610698,12.9606143338715,9.18492738542926,8.32739181851524,15.6481880014747,6.98499100995342,1.5089759505299,6.24050064553804,2.81521798662318,4.82230611340665,11.3999372182495,6.61679116392116,4.93877127379064,19.1072896145753,0,1.02939162845886,12.2190304740105,2.69263504296152,3.04883877975425,7.74266864282364,2.3674473558521,4.72234156193769,5.09081472528348,11.6266972375204,6.17028823219124,44.3708300995244,11.0255099442032,14.2825693748813,9.07970666913584,9.64919917007193,9.00155472693308,10.1996878257883,3.78521907415429,9.8788427884113,11.5646574044329,4.23120906661671,8.958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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000158323_5end | |||
|cluster_id=chr7:118219731..118219745,- | |||
|description=CAGE_peak_1_at_ENSMUST00000158323_5end | |||
|id=chr7:118219731..118219745,- | |||
|ontology_enrichment_celltype=CL:0000034!1.77e-27!97;CL:0000723!3.71e-27!91;CL:0000048!3.71e-27!91;CL:0000548!1.69e-23!115;CL:0000004!1.69e-23!115;CL:0000255!1.69e-23!115;CL:0000144!1.36e-22!121;CL:0000012!1.36e-22!121;CL:0002371!1.81e-21!118;CL:0000055!3.56e-18!50;CL:0000393!7.41e-18!39;CL:0000211!7.41e-18!39;CL:0002321!9.93e-18!70;CL:0000220!9.93e-18!70;CL:0000540!3.61e-16!33;CL:0000047!3.61e-16!33;CL:0000031!3.61e-16!33;CL:0000404!3.61e-16!33;CL:0002319!4.56e-16!43;CL:0000221!6.50e-15!44;CL:0000133!6.50e-15!44;CL:0000117!3.59e-13!23;CL:0000337!3.59e-13!23;CL:0002320!9.71e-11!46;CL:0000134!9.71e-11!46;CL:0000219!1.62e-10!54;CL:0002031!9.13e-09!25;CL:0000063!7.46e-07!66;CL:0000738!7.90e-07!17;CL:0002087!7.90e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.73e-27,97;CL:0000723,3.63e-27,91;CL:0000048,3.63e-27,91;CL:0000393,7.40e-18,39;CL:0000211,7.40e-18,39;CL:0002321,9.73e-18,70;CL:0000540,3.61e-16,33;CL:0000047,3.61e-16,33;CL:0000031,3.61e-16,33;CL:0000404,3.61e-16,33;CL:0002319,4.56e-16,43;CL:0000221,6.50e-15,44;CL:0000133,6.50e-15,44;CL:0000117,3.59e-13,23;CL:0000337,3.59e-13,23;CL:0002320,9.54e-11,46;CL:0000134,9.54e-11,46;CL:0000219,1.59e-10,54;CL:0002031,9.13e-09,25;CL:0000738,7.90e-07,17;CL:0002087,7.90e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.88e-12!73;UBERON:0005743!7.88e-12!73;UBERON:0000073!1.88e-11!75;UBERON:0001016!1.88e-11!75;UBERON:0002020!2.08e-11!34;UBERON:0002384!9.71e-11!46;UBERON:0002791!1.22e-08!29;UBERON:0003528!1.22e-08!29;UBERON:0001893!1.22e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.88e-12,73;UBERON:0001016,1.88e-11,75;UBERON:0002020,2.08e-11,34;UBERON:0002384,9.54e-11,46;UBERON:0003528,1.22e-08,29;UBERON:0002791,1.22e-08,29;UBERON:0001893,1.22e-08,29;UBERON:0000073,1.94e-07,54 | |||
|phase1_expression=3.52327463630547,5.23463111459042,10.0099832665698,13.6108895088074,29.0519523368881,4.8684988854448,10.7461814673942,70.7595812459838,109.252048389693,95.9664557920173,39.8937865965427,40.3647124516402,73.2739124105561,92.7530469665562,108.26067259009,14.9831697868471,46.1710839564577,67.3511723039837,56.3540322119586,28.8584963222661,17.6890043514225,14.8936426801328,6.79119451761232,8.79958325363737,10.0940083669555,4.59385571292016,2.15380998079537,2.37018355954478,13.8717096203153,7.56090389279792,8.86922042621219,22.2260735710871,5.53558308826113,15.8481681015439,18.4865036640816,14.6286487915473,13.8835162258411,4.60384793810598,3.906676722619,2.61761871986899,5.29408339227913,8.19654581950135,2.91306211818692,17.3737608806297,22.2015479370737,29.9181206023541,27.3836970521814,7.19483016055474,28.3395175727469,15.3599620268684,6.29938897314131,18.6878333674463,19.9661301208706,50.0499877987828,88.0565753753256,23.9251275513431,34.3840127926508,74.7724533802291,80.5219514221199,104.21122291659,93.1732163154083,14.5703148789727,30.2360230677787,317.664600200334,512.232775809693,233.747957817267,121.338044759954,107.196907184714,89.0693769729823,58.7275831742854,80.5544601975793,124.543829200058,125.453331260516,101.177400151552,19.3607851456837,125.013754978963,134.341374819254,112.747919529221,102.609164215171,93.5073780007074,28.0867065859398,123.977382192509,171.418361386848,209.347690931785,104.361203231561,114.610519749257,120.58881363684,155.270738372475,7.1182621733193,8.16172849153284,52.175607966302,22.371020801516,232.550196128051,422.047895860773,369.073005110276,189.067346355076,12.3591089715942,3.06774580640504,18.4448063268037,33.5672595784823,1.97180787687353,6.41632387071589,0,0,34.2055844797718,29.8964641260616,46.0027244963453,20.6672822291499,1.29468941823586,17.6646145487141,9.02123699183906,8.8294988710521,11.3001593655469,8.59119051149949,7.4080885495494,5.90632979249475,7.16865406429684,0.86759614151947,2.65383165584962,5.17653919831709,9.27534377533653,9.21262980956922,5.59175283654366,4.39171195517321,4.1889341362691,6.89734049063197,19.4100501699591,0,13.5965142968179,5.39246301857362,3.20250421973039,14.0732874366408,4.86708096538374,5.11430914660661,3.32460871295296,5.19172041816825,12.1188842981876,5.84712761867437,20.975988949995,11.3638602178696,6.8963834770233,5.51765050640335,3.60124259610698,12.9606143338715,9.18492738542926,8.32739181851524,15.6481880014747,6.98499100995342,1.5089759505299,6.24050064553804,2.81521798662318,4.82230611340665,11.3999372182495,6.61679116392116,4.93877127379064,19.1072896145753,0,1.02939162845886,12.2190304740105,2.69263504296152,3.04883877975425,7.74266864282364,2.3674473558521,4.72234156193769,5.09081472528348,11.6266972375204,6.17028823219124,44.3708300995244,11.0255099442032,14.2825693748813,9.07970666913584,9.64919917007193,9.00155472693308,10.1996878257883,3.78521907415429,9.8788427884113,11.5646574044329,4.23120906661671,8.95810652247983,17.4177503895329,1.67527699718721,3.63030344322017,3.55804870151792,6.84812254005213,18.0321043386914,5.76446341534038,7.03738584640755,5.37182474511107,2.72949721966768,16.178749355776,6.70027954611552,6.77080329064848,4.55202962287396,8.3401414205102,4.50830942692322,15.6811522440892,11.8311017172252,11.7828177415735,8.47369597465048,5.75679577120448,13.815888050041,11.5993334086492,15.7119892356189,1.00107063429656,2.35870794135844,2.47348323623339,2.02860121388503,3.13530307678142,4.58326533206556,3.74004978686054,3.72911021582581,7.96228098245436,41.6927798929328,2.97712758134803,5.92871578917665,7.07220858251913,8.43167843552987,13.5084185981743,11.2699446001629,1.51593129416388,3.7481944581666,7.97801903143384,5.63256595892405,3.1826188913945,4.28478553594825,9.95181604074774,3.94087860265477,5.53661724121937,7.49437412690189,9.83179888294428,7.08008425650172,10.8486793936134,176.425802208949,141.959383476683,1.47529281905711,6.89841865761831,4.97706828962155,6.68106613575558,1.14754461763673,8.07906967053994,95.2834822637095,53.0996692243428,182.032771084215,64.2826066492365,97.1402218999238,36.7999490025482,81.7717617383286,120.993925175283,47.4345333535828,5.78378369559253,11.9229671574946,12.9987890677096,10.750539317336,10.2281476242972,10.619611067197,7.28341908464944,9.06970670894253,7.16699303072413,3.2483208216885,3.99665692327106,2.84271122485043,6.18007340111759,10.6949213515416,9.48110273807448,16.8669773719998,23.721174947083,3.74483566329167,9.54323798365944,4.65691261617916,11.1455258216428,4.07882537377229,11.2372355089304,18.1003922662333,13.3964577610424,7.27482294997502,8.89694697628045,7.27743713581374,1.15420377059036,0.484393280087717,2.41251699712623,3.58117032009409,2.9545361954111,7.28702091574627,5.7481843623258,9.3978984438819,5.57244543500701,5.00025223898222,4.89757988212197,4.10082683163076,8.69357058184786,24.3069154891213,28.4101448217026,29.021994498929,1.90934123603023,3.16335993581135,1.21991680276109,8.6404272657441,14.0089158329694,9.826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| |||
|short_description=p1@ENSMUST00000158323 | |||
}} |
Latest revision as of 01:28, 4 August 2015
Short description: | p1@ENSMUST00000158323 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000158323_5end |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | 0bp_to_ENSMUST00000158323_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.73e-27 | 97 |
somatic stem cell | 3.63e-27 | 91 |
multi fate stem cell | 3.63e-27 | 91 |
electrically responsive cell | 7.40e-18 | 39 |
electrically active cell | 7.40e-18 | 39 |
embryonic cell | 9.73e-18 | 70 |
neuron | 3.61e-16 | 33 |
neuronal stem cell | 3.61e-16 | 33 |
neuroblast | 3.61e-16 | 33 |
electrically signaling cell | 3.61e-16 | 33 |
neural cell | 4.56e-16 | 43 |
ectodermal cell | 6.50e-15 | 44 |
neurectodermal cell | 6.50e-15 | 44 |
CNS neuron (sensu Vertebrata) | 3.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-13 | 23 |
connective tissue cell | 9.54e-11 | 46 |
mesenchymal cell | 9.54e-11 | 46 |
motile cell | 1.59e-10 | 54 |
hematopoietic lineage restricted progenitor cell | 9.13e-09 | 25 |
leukocyte | 7.90e-07 | 17 |
nongranular leukocyte | 7.90e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.88e-12 | 73 |
nervous system | 1.88e-11 | 75 |
gray matter | 2.08e-11 | 34 |
connective tissue | 9.54e-11 | 46 |
brain grey matter | 1.22e-08 | 29 |
regional part of telencephalon | 1.22e-08 | 29 |
telencephalon | 1.22e-08 | 29 |
regional part of nervous system | 1.94e-07 | 54 |