FFCP PHASE1:Hg19::chrX:153775869..153775887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8517 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5961 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000369602_5end | |||
|cluster_id=chrX:153775869..153775887,+ | |||
|description=CAGE_peak_2_at_IKBKG_5end | |||
|id=chrX:153775869..153775887,+ | |||
|ontology_enrichment_celltype=CL:0000003!3.85e-34!722;CL:0000144!3.47e-32!625;CL:0002371!7.23e-32!591;CL:0000548!2.12e-31!679;CL:0000004!2.12e-31!679;CL:0000255!2.12e-31!679;CL:0000012!1.27e-30!682;CL:0000063!2.45e-21!578;CL:0000723!9.78e-18!436;CL:0000048!1.40e-17!430;CL:0000034!2.36e-16!444;CL:0002320!8.67e-14!365;CL:0000738!6.08e-13!140;CL:0002057!6.74e-13!42;CL:0000134!7.85e-13!358;CL:0000860!1.49e-11!45;CL:0002087!3.96e-11!119;CL:0000988!1.00e-10!182;CL:0000219!1.98e-10!390;CL:0002031!4.92e-10!124;CL:0002032!6.04e-10!165;CL:0000837!6.04e-10!165;CL:0000766!1.71e-09!76;CL:0000037!1.78e-09!172;CL:0000566!1.78e-09!172;CL:0002194!1.42e-08!63;CL:0000576!1.42e-08!63;CL:0000040!1.42e-08!63;CL:0000559!1.42e-08!63;CL:0000222!1.51e-08!119;CL:0002009!4.88e-08!65;CL:0000839!1.39e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-09;33!CL:0002057;3.26e-09;33!CL:0000473;1.22e-07;39!CL:0000234;1.22e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.11e-18,433;CL:0000048,3.84e-18,427;CL:0000034,8.05e-17,441;CL:0002320,5.32e-14,361;CL:0000738,8.65e-14,136;CL:0000134,4.92e-13,354;CL:0000860,5.70e-13,42;CL:0002057,5.70e-13,42;CL:0000473,3.56e-12,48;CL:0000234,3.56e-12,48;CL:0002087,3.95e-12,115;CL:0000988,4.60e-11,177;CL:0002031,7.92e-11,120;CL:0002032,1.15e-10,161;CL:0000837,1.15e-10,161;CL:0000766,1.16e-10,72;CL:0000219,1.36e-10,386;CL:0000037,4.56e-10,168;CL:0002194,6.47e-10,59;CL:0000576,6.47e-10,59;CL:0000040,6.47e-10,59;CL:0000559,6.47e-10,59;CL:0002009,3.31e-09,61;CL:0000222,3.56e-09,121;CL:0000839,1.29e-08,66;CL:0000763,2.13e-07,108;CL:0000049,2.13e-07,108;CL:0000557,3.08e-07,67;CL:0000192,8.90e-07,43;CL:0000514,8.90e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.93e-12!375;UBERON:0003081!2.36e-11!216;UBERON:0002193!6.55e-10!112;UBERON:0002390!5.13e-09!102;UBERON:0003061!5.13e-09!102;UBERON:0002204!1.72e-08!167;UBERON:0004765!8.41e-07!101;UBERON:0001434!8.41e-07!101;UBERON:0002371!9.72e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-12,371;UBERON:0003081,2.76e-11,203;UBERON:0002193,1.14e-10,108;UBERON:0002390,9.11e-10,98;UBERON:0003061,9.11e-10,98;UBERON:0002204,1.51e-09,167;UBERON:0002405,1.66e-08,93;UBERON:0000926,3.67e-08,315;UBERON:0004120,3.67e-08,315;UBERON:0006603,3.67e-08,315;UBERON:0001434,1.09e-07,100;UBERON:0002371,1.78e-07,76;UBERON:0004765,2.45e-07,90;UBERON:0000055,6.88e-07,68 | |||
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| |||
|short_description=p2@IKBKG | |||
}} |
Latest revision as of 04:10, 20 September 2015
Short description: | p2@IKBKG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IKBKG_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000369602_5end |
EntrezGene: | IKBKG |
HGNC: | 5961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.11e-18 | 433 |
multi fate stem cell | 3.84e-18 | 427 |
stem cell | 8.05e-17 | 441 |
connective tissue cell | 5.32e-14 | 361 |
leukocyte | 8.65e-14 | 136 |
mesenchymal cell | 4.92e-13 | 354 |
classical monocyte | 5.70e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-13 | 42 |
defensive cell | 3.56e-12 | 48 |
phagocyte | 3.56e-12 | 48 |
nongranular leukocyte | 3.95e-12 | 115 |
hematopoietic cell | 4.60e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 7.92e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.15e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-10 | 161 |
myeloid leukocyte | 1.16e-10 | 72 |
motile cell | 1.36e-10 | 386 |
hematopoietic stem cell | 4.56e-10 | 168 |
monopoietic cell | 6.47e-10 | 59 |
monocyte | 6.47e-10 | 59 |
monoblast | 6.47e-10 | 59 |
promonocyte | 6.47e-10 | 59 |
macrophage dendritic cell progenitor | 3.31e-09 | 61 |
mesodermal cell | 3.56e-09 | 121 |
myeloid lineage restricted progenitor cell | 1.29e-08 | 66 |
myeloid cell | 2.13e-07 | 108 |
common myeloid progenitor | 2.13e-07 | 108 |
granulocyte monocyte progenitor cell | 3.08e-07 | 67 |
smooth muscle cell | 8.90e-07 | 43 |
smooth muscle myoblast | 8.90e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.16e-12 | 371 |
lateral plate mesoderm | 2.76e-11 | 203 |
hemolymphoid system | 1.14e-10 | 108 |
hematopoietic system | 9.11e-10 | 98 |
blood island | 9.11e-10 | 98 |
musculoskeletal system | 1.51e-09 | 167 |
immune system | 1.66e-08 | 93 |
mesoderm | 3.67e-08 | 315 |
mesoderm-derived structure | 3.67e-08 | 315 |
presumptive mesoderm | 3.67e-08 | 315 |
skeletal system | 1.09e-07 | 100 |
bone marrow | 1.78e-07 | 76 |
skeletal element | 2.45e-07 | 90 |
vessel | 6.88e-07 | 68 |