FFCP PHASE1:Mm9::chr11:107332073..107332091,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:107332073..107332091,-
|short_description=p3@Pitpnc1
|description=CAGE_peak_3_at_Pitpnc1_5end
|association_with_transcript=-39bp_to_ENSMUST00000166405,NM_...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71795 | |EntrezGene=71795 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q4C5,Q8K4R4 | |UniProt=E9Q4C5,Q8K4R4 | ||
|association_with_transcript=-39bp_to_ENSMUST00000166405,NM_145823,uc007mal.1,uc007mam.1,uc007man.1,uc007mao.1,uc007map.1,uc011ygq.1_5end | |||
|cluster_id=chr11:107332073..107332091,- | |||
|description=CAGE_peak_3_at_Pitpnc1_5end | |||
|id=chr11:107332073..107332091,- | |||
|ontology_enrichment_celltype=CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.81e-07,33;CL:0000047,3.81e-07,33;CL:0000031,3.81e-07,33;CL:0000404,3.81e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.28e-11!94;UBERON:0000475!6.66e-10!200;UBERON:0001017!2.51e-09!73;UBERON:0005743!2.51e-09!73;UBERON:0007811!2.59e-09!86;UBERON:0000073!2.95e-08!75;UBERON:0001016!2.95e-08!75;UBERON:0000477!6.04e-08!154;UBERON:0001049!1.16e-07!52;UBERON:0005068!1.16e-07!52;UBERON:0006241!1.16e-07!52;UBERON:0007135!1.16e-07!52;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0002616!2.25e-07!49;UBERON:0002020!5.13e-07!34;UBERON:0000033!8.64e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.45e-09,73;UBERON:0000073,1.94e-08,54;UBERON:0002346,2.58e-08,64;UBERON:0003075,2.58e-08,64;UBERON:0007284,2.58e-08,64;UBERON:0001016,3.46e-08,75;UBERON:0001049,1.14e-07,52;UBERON:0005068,1.14e-07,52;UBERON:0006241,1.14e-07,52;UBERON:0007135,1.14e-07,52;UBERON:0002020,5.05e-07,34 | |||
|phase1_expression=2.7225304007815,0.348975407639361,0,0,0,0.33575854382378,0.233612640595526,12.2667157269497,10.2775767170717,11.0010327371337,1.02730780935303,0.957265907944037,8.21763503669787,10.4904482902797,3.66420737997229,5.06188168474565,6.29605690315332,6.30924330716475,6.7186072466812,3.39511721438424,3.48677489619386,1.19149141441062,0.522399578277871,0.639969691173627,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,4.44521471421742,1.84519436275371,0,0.288851619751275,0.498703936075477,0.612508068787107,18.4153917524239,7.813353445238,7.32933241563318,12.9410927366823,16.3930916390027,12.1377588257788,3.52511090331616,2.53442328048786,3.85448179539531,4.69434806608824,2.8343270329458,1.5378032791413,2.13872888981712,4.05960622713551,1.43752564364972,3.6912173332702,11.6057942721815,10.7550015725588,0.771778308107841,0.85960031981627,1.03134418455488,4.65327859977075,3.1739458756322,3.80298842103708,2.03306719241479,2.66788438833342,4.04954872776629,1.97773272513395,2.1314403448383,3.29560121570245,2.68952813725088,4.35496371695606,6.07526722492608,6.52007380189284,4.28476476605705,3.75476519617743,6.24703075996266,5.46319184803947,6.43453150627015,7.70811166995721,6.00130489000382,5.22262213071228,5.40733779693795,4.39140689291566,4.16730696445408,4.4669279840221,5.06486349028512,5.04234217663473,7.36571463684169,6.12198227436143,5.40558392893372,0.908714319998209,0.755715601067855,10.1452571045587,5.16254326188832,4.0798280022465,1.61910957491345,3.89865850468601,3.13618820968135,1.26399978118577,0.170430322578058,0.519572009205738,0.70667914902068,1.26759077799012,2.56652954828636,10.1922095882658,14.2213340630666,3.030874574157,1.77351905832569,2.02209778005913,1.94112595522402,8.2860122767095,3.11728492036132,2.77576522825817,4.26251669636998,0.922461989024234,1.80867168663147,2.82212897125692,1.75933227861546,0.741584903203122,5.20557684911682,7.07688441559899,2.75003644910596,4.63767188766826,3.39412677194655,1.86391761218122,2.63502717310392,5.23616767033638,1.78819938646014,2.99537811264801,5.99902730993408,2.54140454146129,10.7849260371472,10.0650132620098,9.80103946480342,4.86708096538374,4.85859368927628,7.06479351502504,8.92326946872667,3.66621709861139,3.98102305952298,3.28539585963777,4.41927897361595,2.99277018814219,3.90833577536904,2.70093194708024,4.06903008156431,3.94611695077702,3.71529788826064,3.74806898238915,8.01980449290949,3.88022387279116,6.24050064553804,6.51019159406611,3.72632745126877,8.61946472599353,4.179025998266,4.11564272815887,3.98068533636986,3.51106593656617,2.83082697826187,2.84163499395593,0.621377317606506,1.40715635988658,1.62055855314913,2.3674473558521,2.16440654922144,2.00547246753592,2.32533944750408,4.02410102099429,3.73649095574942,2.63295759861569,3.77585167381919,4.78305976320549,4.9707995724613,5.04965265169416,4.96563749413376,3.99550902271842,6.17427674275707,0.660837565967596,1.32225283331772,1.70630600428187,4.87697010906921,2.83508414908605,3.22693639397348,2.44615848229357,0.570676878337677,1.42358718463353,0.823494773620054,3.01602250560323,1.1937388322469,1.36474860983384,0.898819408654221,1.72910439899755,1.1948476395262,1.32767530667157,3.54170389090159,3.38123207019241,3.05476991767971,4.07300223052014,3.7873342740772,3.66771915320692,3.24742325555125,1.56998727841375,2.34454611451421,3.55743152504579,2.50267658574141,2.35870794135844,2.47348323623339,3.24576194221605,3.61765739628625,3.8193877767213,3.74004978686054,5.0261920300261,2.74561413188081,4.31304619582064,6.32639611036456,4.36852742360385,1.76805214562978,3.94674309748207,2.41221760681684,5.54259570499814,2.4633883530163,2.60743962307241,2.71592137240301,3.52035372432753,3.68513766371995,6.42717830392237,6.63454402716516,7.72412206120336,4.20782910332672,6.05928120898451,7.53771247692395,5.00786447411097,5.49666422609744,4.52373851817817,3.80733978673097,4.42587845717133,2.48343071674259,5.45872005958493,5.97779601620236,1.14754461763673,3.53459298086122,4.41711507182759,5.46614242015294,5.81643173878557,4.30143836314594,4.23317480756549,4.81230102341015,5.66734982344852,5.84511715822624,4.34816555741176,4.4984984299053,3.40656204499845,4.27357448801413,5.37526965866801,2.96946221350564,2.65490276679926,3.64170954232472,4.23252979750651,3.96070667487386,3.54362271456927,2.45948118355142,3.10113951801865,4.72593848320757,3.20847640546249,0.948110273807448,3.16255825724996,3.09406629744561,2.38307724027652,3.42116078659489,2.97524972700335,3.64372959553707,1.24138163549592,5.70780216326626,5.10101963866575,3.04464949114599,0.704015124191131,0.21183207086382,0.882113592219848,1.6488625294148,3.71368181400583,1.80938774784468,3.70054266409723,2.1338316966858,1.1659233465194,5.19190845629427,8.54354403989263,5.15967169908056,4.44466865687308,6.02779062415011,5.74115756428306,4.57556346413045,6.11922347977879,4.47844647435706,5.94259887359022,1.90934123603023,2.53068794864908,3.86306987541013,2.37611749807963,2.29997125615916,1.52853794622324,1.348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| |phase1_expression=2.7225304007815,0.348975407639361,0,0,0,0.33575854382378,0.233612640595526,12.2667157269497,10.2775767170717,11.0010327371337,1.02730780935303,0.957265907944037,8.21763503669787,10.4904482902797,3.66420737997229,5.06188168474565,6.29605690315332,6.30924330716475,6.7186072466812,3.39511721438424,3.48677489619386,1.19149141441062,0.522399578277871,0.639969691173627,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,4.44521471421742,1.84519436275371,0,0.288851619751275,0.498703936075477,0.612508068787107,18.4153917524239,7.813353445238,7.32933241563318,12.9410927366823,16.3930916390027,12.1377588257788,3.52511090331616,2.53442328048786,3.85448179539531,4.69434806608824,2.8343270329458,1.5378032791413,2.13872888981712,4.05960622713551,1.43752564364972,3.6912173332702,11.6057942721815,10.7550015725588,0.771778308107841,0.85960031981627,1.03134418455488,4.65327859977075,3.1739458756322,3.80298842103708,2.03306719241479,2.66788438833342,4.04954872776629,1.97773272513395,2.1314403448383,3.29560121570245,2.68952813725088,4.35496371695606,6.07526722492608,6.52007380189284,4.28476476605705,3.75476519617743,6.24703075996266,5.46319184803947,6.43453150627015,7.70811166995721,6.00130489000382,5.22262213071228,5.40733779693795,4.39140689291566,4.16730696445408,4.4669279840221,5.06486349028512,5.04234217663473,7.36571463684169,6.12198227436143,5.40558392893372,0.908714319998209,0.755715601067855,10.1452571045587,5.16254326188832,4.0798280022465,1.61910957491345,3.89865850468601,3.13618820968135,1.26399978118577,0.170430322578058,0.519572009205738,0.70667914902068,1.26759077799012,2.56652954828636,10.1922095882658,14.2213340630666,3.030874574157,1.77351905832569,2.02209778005913,1.94112595522402,8.2860122767095,3.11728492036132,2.77576522825817,4.26251669636998,0.922461989024234,1.80867168663147,2.82212897125692,1.75933227861546,0.741584903203122,5.20557684911682,7.07688441559899,2.75003644910596,4.63767188766826,3.39412677194655,1.86391761218122,2.63502717310392,5.23616767033638,1.78819938646014,2.99537811264801,5.99902730993408,2.54140454146129,10.7849260371472,10.0650132620098,9.80103946480342,4.86708096538374,4.85859368927628,7.06479351502504,8.92326946872667,3.66621709861139,3.98102305952298,3.28539585963777,4.41927897361595,2.99277018814219,3.90833577536904,2.70093194708024,4.06903008156431,3.94611695077702,3.71529788826064,3.74806898238915,8.01980449290949,3.88022387279116,6.24050064553804,6.51019159406611,3.72632745126877,8.61946472599353,4.179025998266,4.11564272815887,3.98068533636986,3.51106593656617,2.83082697826187,2.84163499395593,0.621377317606506,1.40715635988658,1.62055855314913,2.3674473558521,2.16440654922144,2.00547246753592,2.32533944750408,4.02410102099429,3.73649095574942,2.63295759861569,3.77585167381919,4.78305976320549,4.9707995724613,5.04965265169416,4.96563749413376,3.99550902271842,6.17427674275707,0.660837565967596,1.32225283331772,1.70630600428187,4.87697010906921,2.83508414908605,3.22693639397348,2.44615848229357,0.570676878337677,1.42358718463353,0.823494773620054,3.01602250560323,1.1937388322469,1.36474860983384,0.898819408654221,1.72910439899755,1.1948476395262,1.32767530667157,3.54170389090159,3.38123207019241,3.05476991767971,4.07300223052014,3.7873342740772,3.66771915320692,3.24742325555125,1.56998727841375,2.34454611451421,3.55743152504579,2.50267658574141,2.35870794135844,2.47348323623339,3.24576194221605,3.61765739628625,3.8193877767213,3.74004978686054,5.0261920300261,2.74561413188081,4.31304619582064,6.32639611036456,4.36852742360385,1.76805214562978,3.94674309748207,2.41221760681684,5.54259570499814,2.4633883530163,2.60743962307241,2.71592137240301,3.52035372432753,3.68513766371995,6.42717830392237,6.63454402716516,7.72412206120336,4.20782910332672,6.05928120898451,7.53771247692395,5.00786447411097,5.49666422609744,4.52373851817817,3.80733978673097,4.42587845717133,2.48343071674259,5.45872005958493,5.97779601620236,1.14754461763673,3.53459298086122,4.41711507182759,5.46614242015294,5.81643173878557,4.30143836314594,4.23317480756549,4.81230102341015,5.66734982344852,5.84511715822624,4.34816555741176,4.4984984299053,3.40656204499845,4.27357448801413,5.37526965866801,2.96946221350564,2.65490276679926,3.64170954232472,4.23252979750651,3.96070667487386,3.54362271456927,2.45948118355142,3.10113951801865,4.72593848320757,3.20847640546249,0.948110273807448,3.16255825724996,3.09406629744561,2.38307724027652,3.42116078659489,2.97524972700335,3.64372959553707,1.24138163549592,5.70780216326626,5.10101963866575,3.04464949114599,0.704015124191131,0.21183207086382,0.882113592219848,1.6488625294148,3.71368181400583,1.80938774784468,3.70054266409723,2.1338316966858,1.1659233465194,5.19190845629427,8.54354403989263,5.15967169908056,4.44466865687308,6.02779062415011,5.74115756428306,4.57556346413045,6.11922347977879,4.47844647435706,5.94259887359022,1.90934123603023,2.53068794864908,3.86306987541013,2.37611749807963,2.29997125615916,1.52853794622324,1.348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| ||
|short_description=p3@Pitpnc1 | |||
}} | }} |
Latest revision as of 21:02, 26 September 2015
Short description: | p3@Pitpnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pitpnc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENSMUST00000166405, NM_145823, uc007mal.1, uc007mam.1, uc007man.1, uc007mao.1, uc007map.1, uc011ygq.1_5end |
EntrezGene: | Pitpnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.81e-07 | 33 |
neuronal stem cell | 3.81e-07 | 33 |
neuroblast | 3.81e-07 | 33 |
electrically signaling cell | 3.81e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.45e-09 | 73 |
regional part of nervous system | 1.94e-08 | 54 |
neurectoderm | 2.58e-08 | 64 |
neural plate | 2.58e-08 | 64 |
presumptive neural plate | 2.58e-08 | 64 |
nervous system | 3.46e-08 | 75 |
neural tube | 1.14e-07 | 52 |
neural rod | 1.14e-07 | 52 |
future spinal cord | 1.14e-07 | 52 |
neural keel | 1.14e-07 | 52 |
gray matter | 5.05e-07 | 34 |